RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 PGAP1Q75T13 922 aa10.46□□□□□ -0.73
RNF40-208ENST00000565995 NAA40Q86UY6 237 aa10.46□□□□□ -0.73
RNF40-208ENST00000565995 HS3ST5Q8IZT8 346 aa10.46□□□□□ -0.73
RNF40-208ENST00000565995 SPERTQ8NA61 448 aa10.46□□□□□ -0.73
RNF40-208ENST00000565995 OR9Q2Q8NGE9 314 aa10.46□□□□□ -0.73
RNF40-208ENST00000565995 OR4C15Q8NGM1 316 aa10.46□□□□□ -0.73
RNF40-208ENST00000565995 SLC7A13Q8TCU3 470 aa10.46□□□□□ -0.73
RNF40-208ENST00000565995 DHRS1Q96LJ7 313 aa10.46□□□□□ -0.73
RNF40-208ENST00000565995 C9orf16Q9BUW7 83 aa10.46□□□□□ -0.73
RNF40-208ENST00000565995 NDEL1Q9GZM8 345 aa10.46□□□□□ -0.73
RNF40-208ENST00000565995 VCXQ9H320 206 aa10.46□□□□□ -0.73
RNF40-208ENST00000565995 VCX3BQ9H321 246 aa10.46□□□□□ -0.73
RNF40-208ENST00000565995 IGLV1-36A0A0B4J1U3 117 aa10.45□□□□□ -0.74
RNF40-208ENST00000565995 CD300LBA8K4G0 201 aa10.45□□□□□ -0.74
RNF40-208ENST00000565995 DCTN6O00399 190 aa10.45□□□□□ -0.74
RNF40-208ENST00000565995 GYPAP02724 150 aa10.45□□□□□ -0.74
RNF40-208ENST00000565995 MUC1P15941 1255 aaPredicted RBP10.45□□□□□ -0.74
RNF40-208ENST00000565995 GPR4P46093 362 aa10.45□□□□□ -0.74
RNF40-208ENST00000565995 PRSS12P56730 875 aa10.45□□□□□ -0.74
RNF40-208ENST00000565995 SEC23BQ15437 767 aa10.45□□□□□ -0.74
RNF40-208ENST00000565995 MEP1BQ16820 701 aa10.45□□□□□ -0.74
RNF40-208ENST00000565995 MICAQ29983 383 aa10.45□□□□□ -0.74
RNF40-208ENST00000565995 SLC18B1Q6NT16 456 aa10.45□□□□□ -0.74
RNF40-208ENST00000565995 CORO6Q6QEF8 472 aa10.45□□□□□ -0.74
RNF40-208ENST00000565995 TMEM179BQ7Z7N9 219 aa10.45□□□□□ -0.74
RNF40-208ENST00000565995 CBR4Q8N4T8 237 aa10.45□□□□□ -0.74
RNF40-208ENST00000565995 LINC00471Q8N535 108 aa10.45□□□□□ -0.74
RNF40-208ENST00000565995 Q8N7P7 452 aa10.45□□□□□ -0.74
RNF40-208ENST00000565995 AQP11Q8NBQ7 271 aa10.45□□□□□ -0.74
RNF40-208ENST00000565995 SLC26A10Q8NG04 563 aa10.45□□□□□ -0.74
RNF40-208ENST00000565995 C8orf46Q8TAG6 207 aa10.45□□□□□ -0.74
RNF40-208ENST00000565995 MRAPQ8TCY5 172 aa10.45□□□□□ -0.74
RNF40-208ENST00000565995 SPRYD4Q8WW59 207 aaPredicted RBP10.45□□□□□ -0.74
RNF40-208ENST00000565995 TNFRSF14Q92956 283 aa10.45□□□□□ -0.74
RNF40-208ENST00000565995 FAM46AQ96IP4 442 aaKnown RBP10.45□□□□□ -0.74
RNF40-208ENST00000565995 ATF6BQ99941 703 aa10.45□□□□□ -0.74
RNF40-208ENST00000565995 ZNF556Q9HAH1 456 aa10.45□□□□□ -0.74
RNF40-208ENST00000565995 PNRC2Q9NPJ4 139 aaKnown RBP10.45□□□□□ -0.74
RNF40-208ENST00000565995 MRPL15Q9P015 296 aaKnown RBP10.45□□□□□ -0.74
RNF40-208ENST00000565995 CYB5R1Q9UHQ9 305 aa10.45□□□□□ -0.74
RNF40-208ENST00000565995 B9D1Q9UPM9 204 aa10.45□□□□□ -0.74
RNF40-208ENST00000565995 TMEM5Q9Y2B1 443 aa10.45□□□□□ -0.74
RNF40-208ENST00000565995 ORC6Q9Y5N6 252 aa10.45□□□□□ -0.74
RNF40-208ENST00000565995 F5H5K5 113 aa10.44□□□□□ -0.74
RNF40-208ENST00000565995 EI24O14681 340 aa10.44□□□□□ -0.74
RNF40-208ENST00000565995 NPFFO15130 113 aa10.44□□□□□ -0.74
RNF40-208ENST00000565995 XPNPEP2O43895 674 aa10.44□□□□□ -0.74
RNF40-208ENST00000565995 LCATP04180 440 aa10.44□□□□□ -0.74
RNF40-208ENST00000565995 PRKACGP22612 351 aa10.44□□□□□ -0.74
RNF40-208ENST00000565995 GABRA5P31644 462 aa10.44□□□□□ -0.74
RNF40-208ENST00000565995 FXYD6P3P58550 94 aa10.44□□□□□ -0.74
RNF40-208ENST00000565995 ATPAF1Q5TC12 328 aaPredicted RBP10.44□□□□□ -0.74
RNF40-208ENST00000565995 CRIP3Q6Q6R5 217 aa10.44□□□□□ -0.74
RNF40-208ENST00000565995 DPY19L2P2Q6ZN68 376 aa10.44□□□□□ -0.74
RNF40-208ENST00000565995 CFAP77Q6ZQR2 320 aa10.44□□□□□ -0.74
RNF40-208ENST00000565995 ZBTB49Q6ZSB9 765 aa10.44□□□□□ -0.74
RNF40-208ENST00000565995 ZBTB46Q86UZ6 589 aa10.44□□□□□ -0.74
RNF40-208ENST00000565995 C11orf53Q8IXP5 236 aa10.44□□□□□ -0.74
RNF40-208ENST00000565995 PDZD9Q8IXQ8 264 aa10.44□□□□□ -0.74
RNF40-208ENST00000565995 CMTM4Q8IZR5 234 aa10.44□□□□□ -0.74
RNF40-208ENST00000565995 BEND2Q8NDZ0 799 aa10.44□□□□□ -0.74
RNF40-208ENST00000565995 PPP1R35Q8TAP8 253 aa10.44□□□□□ -0.74
RNF40-208ENST00000565995 NRBF2Q96F24 287 aa10.44□□□□□ -0.74
RNF40-208ENST00000565995 ADAT1Q9BUB4 502 aaKnown RBP10.44□□□□□ -0.74
RNF40-208ENST00000565995 RERGLQ9H628 205 aa10.44□□□□□ -0.74
RNF40-208ENST00000565995 NECAP2Q9NVZ3 263 aa10.44□□□□□ -0.74
RNF40-208ENST00000565995 C1orf123Q9NWV4 160 aa10.44□□□□□ -0.74
RNF40-208ENST00000565995 POLR1DQ9Y2S0 133 aa10.44□□□□□ -0.74
RNF40-208ENST00000565995 IER3IP1Q9Y5U9 82 aa10.44□□□□□ -0.74
RNF40-208ENST00000565995 DNAH9Q9NYC9 4486 aa10.43□□□□□ -0.74
RNF40-208ENST00000565995 ARRDC5A6NEK1 342 aa10.43□□□□□ -0.74
RNF40-208ENST00000565995 ANKRD61A6NGH8 418 aa10.43□□□□□ -0.74
RNF40-208ENST00000565995 SOCS2O14508 198 aa10.43□□□□□ -0.74
RNF40-208ENST00000565995 CASQ2O14958 399 aaPredicted RBP10.43□□□□□ -0.74
RNF40-208ENST00000565995 ANXA8P13928 327 aa10.43□□□□□ -0.74
RNF40-208ENST00000565995 EEF1B2P24534 225 aaKnown RBP10.43□□□□□ -0.74
RNF40-208ENST00000565995 OTX1P32242 354 aaPredicted RBP10.43□□□□□ -0.74
RNF40-208ENST00000565995 GGT2P36268 569 aa10.43□□□□□ -0.74
RNF40-208ENST00000565995 TGM4P49221 684 aa10.43□□□□□ -0.74
RNF40-208ENST00000565995 UBE2E1P51965 193 aa10.43□□□□□ -0.74
RNF40-208ENST00000565995 HMGA2P52926 109 aa10.43□□□□□ -0.74
RNF40-208ENST00000565995 TPTEP56180 551 aa10.43□□□□□ -0.74
RNF40-208ENST00000565995 MZT1Q08AG7 82 aa10.43□□□□□ -0.74
RNF40-208ENST00000565995 ACSM1Q08AH1 577 aa10.43□□□□□ -0.74
RNF40-208ENST00000565995 VAX1Q5SQQ9 334 aa10.43□□□□□ -0.74
RNF40-208ENST00000565995 PGBD2Q6P3X8 592 aa10.43□□□□□ -0.74
RNF40-208ENST00000565995 DNM1P34Q6PK57 102 aa10.43□□□□□ -0.74
RNF40-208ENST00000565995 ZNF826PQ6ZT77 177 aa10.43□□□□□ -0.74
RNF40-208ENST00000565995 OR6V1Q8N148 313 aa10.43□□□□□ -0.74
RNF40-208ENST00000565995 BOLLQ8N9W6 283 aaKnown RBP10.43□□□□□ -0.74
RNF40-208ENST00000565995 TSSK2Q96PF2 358 aa10.43□□□□□ -0.74
RNF40-208ENST00000565995 FEVQ99581 238 aa10.43□□□□□ -0.74
RNF40-208ENST00000565995 PITX2Q99697 317 aa10.43□□□□□ -0.74
RNF40-208ENST00000565995 GABARAPL1Q9H0R8 117 aa10.43□□□□□ -0.74
RNF40-208ENST00000565995 PPA2Q9H2U2 334 aa10.43□□□□□ -0.74
RNF40-208ENST00000565995 RANBP3Q9H6Z4 567 aaPredicted RBP10.43□□□□□ -0.74
RNF40-208ENST00000565995 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.43□□□□□ -0.74
RNF40-208ENST00000565995 KRT84Q9NSB2 600 aa10.43□□□□□ -0.74
RNF40-208ENST00000565995 MAB21L2Q9Y586 359 aa10.43□□□□□ -0.74
RNF40-208ENST00000565995 MEGF11A6BM72 1044 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms