RNA–Protein interactions for RNA: ENST00000565922.1

CMTM3-211, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CMTM3, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-211ENST00000565922 MAP2K3P46734 347 aa16.64■□□□□ 0.25
CMTM3-211ENST00000565922 GNB2P62879 340 aa16.64■□□□□ 0.25
CMTM3-211ENST00000565922 LIPNQ5VXI9 398 aa16.64■□□□□ 0.25
CMTM3-211ENST00000565922 OR51G2Q8NGK0 314 aa16.64■□□□□ 0.25
CMTM3-211ENST00000565922 TMPRSS13Q9BYE2 586 aa16.64■□□□□ 0.25
CMTM3-211ENST00000565922 METTL17Q9H7H0 456 aaPredicted RBP16.64■□□□□ 0.25
CMTM3-211ENST00000565922 C1orf123Q9NWV4 160 aa16.64■□□□□ 0.25
CMTM3-211ENST00000565922 CUBNO60494 3623 aa16.64■□□□□ 0.25
CMTM3-211ENST00000565922 TRAV38-1A0A0B4J264 116 aa16.63■□□□□ 0.25
CMTM3-211ENST00000565922 NDUFA2O43678 99 aa16.63■□□□□ 0.25
CMTM3-211ENST00000565922 CST4P01036 141 aa16.63■□□□□ 0.25
CMTM3-211ENST00000565922 OR2T7P0C7T2 308 aa16.63■□□□□ 0.25
CMTM3-211ENST00000565922 ATP6V1E1P36543 226 aa16.63■□□□□ 0.25
CMTM3-211ENST00000565922 RBMXP38159 391 aaKnown RBP16.63■□□□□ 0.25
CMTM3-211ENST00000565922 C1QL2Q7Z5L3 287 aa16.63■□□□□ 0.25
CMTM3-211ENST00000565922 COMMD2Q86X83 199 aa16.63■□□□□ 0.25
CMTM3-211ENST00000565922 OR2T27Q8NH04 317 aa16.63■□□□□ 0.25
CMTM3-211ENST00000565922 NANPQ8TBE9 248 aa16.63■□□□□ 0.25
CMTM3-211ENST00000565922 HRASLS5Q96KN8 279 aa16.63■□□□□ 0.25
CMTM3-211ENST00000565922 RTL8AQ9BWD3 113 aa16.63■□□□□ 0.25
CMTM3-211ENST00000565922 TTTY10Q9BZA0 68 aa16.63■□□□□ 0.25
CMTM3-211ENST00000565922 PBOV1Q9GZY1 135 aa16.63■□□□□ 0.25
CMTM3-211ENST00000565922 C7orf69Q9H7B7 122 aa16.63■□□□□ 0.25
CMTM3-211ENST00000565922 RNPEPL1Q9HAU8 725 aa16.63■□□□□ 0.25
CMTM3-211ENST00000565922 S100A14Q9HCY8 104 aa16.63■□□□□ 0.25
CMTM3-211ENST00000565922 NUFIP1Q9UHK0 495 aaKnown RBP16.63■□□□□ 0.25
CMTM3-211ENST00000565922 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.63■□□□□ 0.25
CMTM3-211ENST00000565922 RHBDD3Q9Y3P4 386 aa16.63■□□□□ 0.25
CMTM3-211ENST00000565922 ZNF816-ZNF321PA0A0X1KG74 233 aa16.62■□□□□ 0.25
CMTM3-211ENST00000565922 TMEM210A6NLX4 147 aa16.62■□□□□ 0.25
CMTM3-211ENST00000565922 RNF212BA8MTL3 300 aa16.62■□□□□ 0.25
CMTM3-211ENST00000565922 LOC110117498-PIK3R3F6TDL0 507 aa16.62■□□□□ 0.25
CMTM3-211ENST00000565922 LGALS8O00214 317 aa16.62■□□□□ 0.25
CMTM3-211ENST00000565922 TCF21O43680 179 aa16.62■□□□□ 0.25
CMTM3-211ENST00000565922 MTRF1O75570 445 aaKnown RBP16.62■□□□□ 0.25
CMTM3-211ENST00000565922 ZFP36P26651 326 aaKnown RBP16.62■□□□□ 0.25
CMTM3-211ENST00000565922 NPY4RP50391 375 aa16.62■□□□□ 0.25
CMTM3-211ENST00000565922 SEC61A1P61619 476 aaKnown RBP16.62■□□□□ 0.25
CMTM3-211ENST00000565922 FAM201AQ5SY85 155 aa16.62■□□□□ 0.25
CMTM3-211ENST00000565922 GALNT4Q8N4A0 578 aa16.62■□□□□ 0.25
CMTM3-211ENST00000565922 CBR4Q8N4T8 237 aa16.62■□□□□ 0.25
CMTM3-211ENST00000565922 STMN2Q93045 179 aa16.62■□□□□ 0.25
CMTM3-211ENST00000565922 ITPKCQ96DU7 683 aa16.62■□□□□ 0.25
CMTM3-211ENST00000565922 HIST1H2AAQ96QV6 131 aa16.62■□□□□ 0.25
CMTM3-211ENST00000565922 MRI1Q9BV20 369 aa16.62■□□□□ 0.25
CMTM3-211ENST00000565922 LOC105371242A0A075B767 164 aa16.61■□□□□ 0.25
CMTM3-211ENST00000565922 OOEPA6NGQ2 149 aa16.61■□□□□ 0.25
CMTM3-211ENST00000565922 SNTNA6NMZ2 147 aa16.61■□□□□ 0.25
CMTM3-211ENST00000565922 KRT8P05787 483 aa16.61■□□□□ 0.25
CMTM3-211ENST00000565922 ACKR3P25106 362 aa16.61■□□□□ 0.25
CMTM3-211ENST00000565922 PITPNBP48739 271 aa16.61■□□□□ 0.25
CMTM3-211ENST00000565922 ZNF154Q13106 437 aa16.61■□□□□ 0.25
CMTM3-211ENST00000565922 PRDX4Q13162 271 aa16.61■□□□□ 0.25
CMTM3-211ENST00000565922 ZBTB37Q5TC79 503 aa16.61■□□□□ 0.25
CMTM3-211ENST00000565922 MEDAGQ5VYS4 303 aa16.61■□□□□ 0.25
CMTM3-211ENST00000565922 BTNL3Q6UXE8 466 aa16.61■□□□□ 0.25
CMTM3-211ENST00000565922 THAP5Q7Z6K1 395 aa16.61■□□□□ 0.25
CMTM3-211ENST00000565922 ZDHHC23Q8IYP9 409 aa16.61■□□□□ 0.25
CMTM3-211ENST00000565922 PQLC1Q8N2U9 271 aa16.61■□□□□ 0.25
CMTM3-211ENST00000565922 BOLLQ8N9W6 283 aaKnown RBP16.61■□□□□ 0.25
CMTM3-211ENST00000565922 OR1M1Q8NGA1 313 aa16.61■□□□□ 0.25
CMTM3-211ENST00000565922 EME1Q96AY2 570 aa16.61■□□□□ 0.25
CMTM3-211ENST00000565922 LYZL4Q96KX0 146 aa16.61■□□□□ 0.25
CMTM3-211ENST00000565922 MDFIQ99750 246 aa16.61■□□□□ 0.25
CMTM3-211ENST00000565922 CLN8Q9UBY8 286 aa16.61■□□□□ 0.25
CMTM3-211ENST00000565922 GTF2A1LQ9UNN4 478 aa16.61■□□□□ 0.25
CMTM3-211ENST00000565922 INSIG2Q9Y5U4 225 aa16.61■□□□□ 0.25
CMTM3-211ENST00000565922 R4GMQ9 66 aa16.61■□□□□ 0.25
CMTM3-211ENST00000565922 ATRQ13535 2644 aa16.6■□□□□ 0.25
CMTM3-211ENST00000565922 A0A0A6YYJ9 748 aa16.6■□□□□ 0.25
CMTM3-211ENST00000565922 ZNF850A8MQ14 1090 aa16.6■□□□□ 0.25
CMTM3-211ENST00000565922 PRR32B1ATL7 298 aa16.6■□□□□ 0.25
CMTM3-211ENST00000565922 ZNF12P17014 697 aa16.6■□□□□ 0.25
CMTM3-211ENST00000565922 RIPPLY1Q0D2K3 151 aa16.6■□□□□ 0.25
CMTM3-211ENST00000565922 BCL2L15Q5TBC7 163 aa16.6■□□□□ 0.25
CMTM3-211ENST00000565922 DEFB108BQ8NET1 73 aa16.6■□□□□ 0.25
CMTM3-211ENST00000565922 SEMA6DQ8NFY4 1073 aa16.6■□□□□ 0.25
CMTM3-211ENST00000565922 PIGCQ92535 297 aa16.6■□□□□ 0.25
CMTM3-211ENST00000565922 OCEL1Q9H607 264 aa16.6■□□□□ 0.25
CMTM3-211ENST00000565922 GPR84Q9NQS5 396 aa16.6■□□□□ 0.25
CMTM3-211ENST00000565922 SNX5Q9Y5X3 404 aa16.6■□□□□ 0.25
CMTM3-211ENST00000565922 DHRS3O75911 302 aa16.59■□□□□ 0.25
CMTM3-211ENST00000565922 AVPP01185 164 aa16.59■□□□□ 0.25
CMTM3-211ENST00000565922 LHBP01229 141 aa16.59■□□□□ 0.25
CMTM3-211ENST00000565922 IGLV3-1P01715 115 aa16.59■□□□□ 0.25
CMTM3-211ENST00000565922 CD80P33681 288 aa16.59■□□□□ 0.25
CMTM3-211ENST00000565922 SNRPGP62308 76 aaKnown RBP16.59■□□□□ 0.25
CMTM3-211ENST00000565922 SLC25A30Q5SVS4 291 aa16.59■□□□□ 0.25
CMTM3-211ENST00000565922 SFRP4Q6FHJ7 346 aaPredicted RBP16.59■□□□□ 0.25
CMTM3-211ENST00000565922 C1orf229Q6ZS94 237 aaPredicted RBP16.59■□□□□ 0.25
CMTM3-211ENST00000565922 ZBTB49Q6ZSB9 765 aa16.59■□□□□ 0.25
CMTM3-211ENST00000565922 ZNF826PQ6ZT77 177 aa16.59■□□□□ 0.25
CMTM3-211ENST00000565922 KCTD8Q6ZWB6 473 aa16.59■□□□□ 0.25
CMTM3-211ENST00000565922 KRT74Q7RTS7 529 aa16.59■□□□□ 0.25
CMTM3-211ENST00000565922 WDR86Q86TI4 376 aa16.59■□□□□ 0.25
CMTM3-211ENST00000565922 GCSAMQ8N6F7 178 aa16.59■□□□□ 0.25
CMTM3-211ENST00000565922 YIPF7Q8N8F6 280 aa16.59■□□□□ 0.25
CMTM3-211ENST00000565922 OR10H4Q8NGA5 316 aa16.59■□□□□ 0.25
CMTM3-211ENST00000565922 OR51E1Q8TCB6 317 aa16.59■□□□□ 0.25
CMTM3-211ENST00000565922 ZNF418Q8TF45 676 aaPredicted RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms