RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 WDR82Q6UXN9 313 aa12.98□□□□□ -0.33
CDH3-204ENST00000565453 BRD3OSQ6XYD6 125 aa12.98□□□□□ -0.33
CDH3-204ENST00000565453 SPATA24Q86W54 205 aa12.98□□□□□ -0.33
CDH3-204ENST00000565453 CSNK2A3Q8NEV1 391 aa12.98□□□□□ -0.33
CDH3-204ENST00000565453 LRRC29Q8WV35 223 aa12.98□□□□□ -0.33
CDH3-204ENST00000565453 ITPKCQ96DU7 683 aa12.98□□□□□ -0.33
CDH3-204ENST00000565453 PGAM5Q96HS1 289 aa12.98□□□□□ -0.33
CDH3-204ENST00000565453 TBX15Q96SF7 602 aa12.98□□□□□ -0.33
CDH3-204ENST00000565453 ZNF747Q9BV97 191 aa12.98□□□□□ -0.33
CDH3-204ENST00000565453 RGCCQ9H4X1 137 aa12.98□□□□□ -0.33
CDH3-204ENST00000565453 ZNF556Q9HAH1 456 aa12.98□□□□□ -0.33
CDH3-204ENST00000565453 BRD7Q9NPI1 651 aa12.98□□□□□ -0.33
CDH3-204ENST00000565453 DNAJB9Q9UBS3 223 aa12.98□□□□□ -0.33
CDH3-204ENST00000565453 POMPQ9Y244 141 aa12.98□□□□□ -0.33
CDH3-204ENST00000565453 NBEAL1Q6ZS30 2694 aa12.98□□□□□ -0.33
CDH3-204ENST00000565453 IGHV3OR15-7A0A075B7D8 119 aa12.97□□□□□ -0.33
CDH3-204ENST00000565453 P2RY10O00398 339 aa12.97□□□□□ -0.33
CDH3-204ENST00000565453 GYG2O15488 501 aa12.97□□□□□ -0.33
CDH3-204ENST00000565453 E2F6O75461 281 aa12.97□□□□□ -0.33
CDH3-204ENST00000565453 LIPFP07098 398 aa12.97□□□□□ -0.33
CDH3-204ENST00000565453 SFTPBP07988 381 aa12.97□□□□□ -0.33
CDH3-204ENST00000565453 ACKR3P25106 362 aa12.97□□□□□ -0.33
CDH3-204ENST00000565453 NAA10P41227 235 aaPredicted RBP12.97□□□□□ -0.33
CDH3-204ENST00000565453 ELF3P78545 371 aaPredicted RBP12.97□□□□□ -0.33
CDH3-204ENST00000565453 POU4F2Q12837 409 aa12.97□□□□□ -0.33
CDH3-204ENST00000565453 DEFB112Q30KQ8 113 aa12.97□□□□□ -0.33
CDH3-204ENST00000565453 GFOD2Q3B7J2 385 aa12.97□□□□□ -0.33
CDH3-204ENST00000565453 TMEM236Q5W0B7 351 aa12.97□□□□□ -0.33
CDH3-204ENST00000565453 GALNT4Q8N4A0 578 aa12.97□□□□□ -0.33
CDH3-204ENST00000565453 THEM6Q8WUY1 208 aa12.97□□□□□ -0.33
CDH3-204ENST00000565453 SLC25A28Q96A46 364 aa12.97□□□□□ -0.33
CDH3-204ENST00000565453 LYZL4Q96KX0 146 aa12.97□□□□□ -0.33
CDH3-204ENST00000565453 FGF23Q9GZV9 251 aaPredicted RBP12.97□□□□□ -0.33
CDH3-204ENST00000565453 PCDHGB1Q9Y5G3 927 aa12.97□□□□□ -0.33
CDH3-204ENST00000565453 A0A1B0GW55 424 aa12.96□□□□□ -0.33
CDH3-204ENST00000565453 SRRM5B3KS81 715 aa12.96□□□□□ -0.33
CDH3-204ENST00000565453 DVL1O14640 695 aa12.96□□□□□ -0.33
CDH3-204ENST00000565453 TIPRLO75663 272 aa12.96□□□□□ -0.33
CDH3-204ENST00000565453 DUX4L2P0CJ85 424 aa12.96□□□□□ -0.33
CDH3-204ENST00000565453 DUX4L3P0CJ86 424 aa12.96□□□□□ -0.33
CDH3-204ENST00000565453 DUX4L4P0CJ87 422 aa12.96□□□□□ -0.33
CDH3-204ENST00000565453 DUX4L5P0CJ88 424 aa12.96□□□□□ -0.33
CDH3-204ENST00000565453 DUX4L6P0CJ89 424 aa12.96□□□□□ -0.33
CDH3-204ENST00000565453 DUX4L7P0CJ90 424 aa12.96□□□□□ -0.33
CDH3-204ENST00000565453 ALOX5APP20292 161 aa12.96□□□□□ -0.33
CDH3-204ENST00000565453 BPIFB3P59826 476 aa12.96□□□□□ -0.33
CDH3-204ENST00000565453 PSMA6P60900 246 aaKnown RBP12.96□□□□□ -0.33
CDH3-204ENST00000565453 SNCBQ16143 134 aa12.96□□□□□ -0.33
CDH3-204ENST00000565453 C11orf91Q3C1V1 193 aa12.96□□□□□ -0.33
CDH3-204ENST00000565453 GPR157Q5UAW9 335 aa12.96□□□□□ -0.33
CDH3-204ENST00000565453 RUSC1-AS1Q66K80 236 aa12.96□□□□□ -0.33
CDH3-204ENST00000565453 DUX4L9Q6RFH8 374 aaPredicted RBP12.96□□□□□ -0.33
CDH3-204ENST00000565453 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.96□□□□□ -0.33
CDH3-204ENST00000565453 FGFRL1Q8N441 504 aa12.96□□□□□ -0.33
CDH3-204ENST00000565453 OR8B12Q8NGG6 310 aa12.96□□□□□ -0.33
CDH3-204ENST00000565453 SGMS2Q8NHU3 365 aa12.96□□□□□ -0.33
CDH3-204ENST00000565453 BCAS4Q8TDM0 211 aa12.96□□□□□ -0.33
CDH3-204ENST00000565453 SEH1LQ96EE3 360 aa12.96□□□□□ -0.33
CDH3-204ENST00000565453 WDFY2Q96P53 400 aa12.96□□□□□ -0.33
CDH3-204ENST00000565453 PCGF1Q9BSM1 259 aa12.96□□□□□ -0.33
CDH3-204ENST00000565453 PAPOLGQ9BWT3 736 aaKnown RBP12.96□□□□□ -0.33
CDH3-204ENST00000565453 SIRPDQ9H106 197 aa12.96□□□□□ -0.33
CDH3-204ENST00000565453 YY1AP1Q9H869 796 aa12.96□□□□□ -0.33
CDH3-204ENST00000565453 DUX4Q9UBX2 424 aa12.96□□□□□ -0.33
CDH3-204ENST00000565453 CENPVL3A0A0U1RRI6 287 aa12.95□□□□□ -0.34
CDH3-204ENST00000565453 CCDC182A6NF36 153 aa12.95□□□□□ -0.34
CDH3-204ENST00000565453 DNAJC8O75937 253 aaPredicted RBP12.95□□□□□ -0.34
CDH3-204ENST00000565453 TOX4O94842 621 aa12.95□□□□□ -0.34
CDH3-204ENST00000565453 CST4P01036 141 aa12.95□□□□□ -0.34
CDH3-204ENST00000565453 MUC1P15941 1255 aaPredicted RBP12.95□□□□□ -0.34
CDH3-204ENST00000565453 AMY2BP19961 511 aa12.95□□□□□ -0.34
CDH3-204ENST00000565453 GNALP38405 381 aa12.95□□□□□ -0.34
CDH3-204ENST00000565453 HCCSP53701 268 aa12.95□□□□□ -0.34
CDH3-204ENST00000565453 IL5RAQ01344 420 aa12.95□□□□□ -0.34
CDH3-204ENST00000565453 PRDX4Q13162 271 aa12.95□□□□□ -0.34
CDH3-204ENST00000565453 APOFQ13790 326 aa12.95□□□□□ -0.34
CDH3-204ENST00000565453 WDR38Q5JTN6 314 aa12.95□□□□□ -0.34
CDH3-204ENST00000565453 FAHD1Q6P587 224 aa12.95□□□□□ -0.34
CDH3-204ENST00000565453 BTN2A1Q7KYR7 527 aa12.95□□□□□ -0.34
CDH3-204ENST00000565453 KRT74Q7RTS7 529 aa12.95□□□□□ -0.34
CDH3-204ENST00000565453 PNLDC1Q8NA58 520 aaKnown RBP12.95□□□□□ -0.34
CDH3-204ENST00000565453 DNAJC9Q8WXX5 260 aa12.95□□□□□ -0.34
CDH3-204ENST00000565453 OR5P3Q8WZ94 311 aa12.95□□□□□ -0.34
CDH3-204ENST00000565453 TAF15Q92804 592 aaKnown RBP eCLIP12.95□□□□□ -0.34
CDH3-204ENST00000565453 UTP4Q969X6 686 aaKnown RBP12.95□□□□□ -0.34
CDH3-204ENST00000565453 NRBF2Q96F24 287 aa12.95□□□□□ -0.34
CDH3-204ENST00000565453 MICU1Q9BPX6 476 aa12.95□□□□□ -0.34
CDH3-204ENST00000565453 NIPAL2Q9H841 368 aa12.95□□□□□ -0.34
CDH3-204ENST00000565453 LRP12Q9Y561 859 aa12.95□□□□□ -0.34
CDH3-204ENST00000565453 MPC1Q9Y5U8 109 aa12.95□□□□□ -0.34
CDH3-204ENST00000565453 ANXA2P2A6NMY6 339 aa12.94□□□□□ -0.34
CDH3-204ENST00000565453 ZNF850A8MQ14 1090 aa12.94□□□□□ -0.34
CDH3-204ENST00000565453 PRR32B1ATL7 298 aa12.94□□□□□ -0.34
CDH3-204ENST00000565453 CDIPTO14735 213 aa12.94□□□□□ -0.34
CDH3-204ENST00000565453 TMPRSS2O15393 492 aa12.94□□□□□ -0.34
CDH3-204ENST00000565453 HOXA3O43365 443 aaPredicted RBP12.94□□□□□ -0.34
CDH3-204ENST00000565453 ECDO95905 644 aaPredicted RBP12.94□□□□□ -0.34
CDH3-204ENST00000565453 DAPP51397 102 aa12.94□□□□□ -0.34
CDH3-204ENST00000565453 CRISP1P54107 249 aa12.94□□□□□ -0.34
CDH3-204ENST00000565453 MICBQ29980 383 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms