RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 ZSCAN4Q8NAM6 433 aaPredicted RBP7.06□□□□□ -1.28
CAPN3-213ENST00000565173 AQP11Q8NBQ7 271 aa7.06□□□□□ -1.28
CAPN3-213ENST00000565173 OR1M1Q8NGA1 313 aa7.06□□□□□ -1.28
CAPN3-213ENST00000565173 REEP6Q96HR9 211 aa7.06□□□□□ -1.28
CAPN3-213ENST00000565173 AMELYQ99218 206 aa7.06□□□□□ -1.28
CAPN3-213ENST00000565173 CCL13Q99616 98 aa7.06□□□□□ -1.28
CAPN3-213ENST00000565173 TSSK6Q9BXA6 273 aa7.06□□□□□ -1.28
CAPN3-213ENST00000565173 NDE1Q9NXR1 346 aa7.06□□□□□ -1.28
CAPN3-213ENST00000565173 VNN3Q9NY84 501 aa7.06□□□□□ -1.28
CAPN3-213ENST00000565173 KIF17Q9P2E2 1029 aa7.06□□□□□ -1.28
CAPN3-213ENST00000565173 RNF114Q9Y508 228 aa7.06□□□□□ -1.28
CAPN3-213ENST00000565173 KPTNQ9Y664 436 aa7.06□□□□□ -1.28
CAPN3-213ENST00000565173 WNK1Q9H4A3 2382 aa7.06□□□□□ -1.28
CAPN3-213ENST00000565173 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.05□□□□□ -1.28
CAPN3-213ENST00000565173 hCG_38984A0A1B0GV85 526 aa7.05□□□□□ -1.28
CAPN3-213ENST00000565173 A0A1B0GVI7 797 aa7.05□□□□□ -1.28
CAPN3-213ENST00000565173 ANKRD30BLA7E2S9 258 aa7.05□□□□□ -1.28
CAPN3-213ENST00000565173 CCNB2O95067 398 aa7.05□□□□□ -1.28
CAPN3-213ENST00000565173 SOX14O95416 240 aa7.05□□□□□ -1.28
CAPN3-213ENST00000565173 T-ENOLP0DO92 83 aa7.05□□□□□ -1.28
CAPN3-213ENST00000565173 ATP6V1B2P21281 511 aa7.05□□□□□ -1.28
CAPN3-213ENST00000565173 OPRL1P41146 370 aa7.05□□□□□ -1.28
CAPN3-213ENST00000565173 SLC15A1P46059 708 aa7.05□□□□□ -1.28
CAPN3-213ENST00000565173 DLX1P56177 255 aa7.05□□□□□ -1.28
CAPN3-213ENST00000565173 ZNF121P58317 390 aaPredicted RBP7.05□□□□□ -1.28
CAPN3-213ENST00000565173 GRB2P62993 217 aaKnown RBP7.05□□□□□ -1.28
CAPN3-213ENST00000565173 PRB3Q04118 309 aaPredicted RBP7.05□□□□□ -1.28
CAPN3-213ENST00000565173 TAF13Q15543 124 aa7.05□□□□□ -1.28
CAPN3-213ENST00000565173 TAF9Q16594 264 aa7.05□□□□□ -1.28
CAPN3-213ENST00000565173 MICBQ29980 383 aa7.05□□□□□ -1.28
CAPN3-213ENST00000565173 MICAQ29983 383 aa7.05□□□□□ -1.28
CAPN3-213ENST00000565173 FAM76BQ5HYJ3 339 aa7.05□□□□□ -1.28
CAPN3-213ENST00000565173 METAP1DQ6UB28 335 aaPredicted RBP7.05□□□□□ -1.28
CAPN3-213ENST00000565173 CYP2R1Q6VVX0 501 aa7.05□□□□□ -1.28
CAPN3-213ENST00000565173 Q6ZSV7 163 aa7.05□□□□□ -1.28
CAPN3-213ENST00000565173 DPY19L4Q7Z388 723 aa7.05□□□□□ -1.28
CAPN3-213ENST00000565173 DEFB107AQ8IZN7 70 aa7.05□□□□□ -1.28
CAPN3-213ENST00000565173 GALNT4Q8N4A0 578 aa7.05□□□□□ -1.28
CAPN3-213ENST00000565173 FAM216BQ8N7L0 139 aa7.05□□□□□ -1.28
CAPN3-213ENST00000565173 Q8N7P7 452 aa7.05□□□□□ -1.28
CAPN3-213ENST00000565173 OR2T33Q8NG76 320 aa7.05□□□□□ -1.28
CAPN3-213ENST00000565173 OR6K6Q8NGW6 343 aa7.05□□□□□ -1.28
CAPN3-213ENST00000565173 OR8S1Q8NH09 359 aa7.05□□□□□ -1.28
CAPN3-213ENST00000565173 LRRC29Q8WV35 223 aa7.05□□□□□ -1.28
CAPN3-213ENST00000565173 RNF133Q8WVZ7 376 aa7.05□□□□□ -1.28
CAPN3-213ENST00000565173 ST8SIA4Q92187 359 aa7.05□□□□□ -1.28
CAPN3-213ENST00000565173 TNFRSF14Q92956 283 aa7.05□□□□□ -1.28
CAPN3-213ENST00000565173 C12orf43Q96C57 262 aaKnown RBP7.05□□□□□ -1.28
CAPN3-213ENST00000565173 ITPKCQ96DU7 683 aa7.05□□□□□ -1.28
CAPN3-213ENST00000565173 DMRTB1Q96MA1 342 aa7.05□□□□□ -1.28
CAPN3-213ENST00000565173 RBM4BQ9BQ04 359 aaKnown RBP7.05□□□□□ -1.28
CAPN3-213ENST00000565173 ABHD6Q9BV23 337 aa7.05□□□□□ -1.28
CAPN3-213ENST00000565173 DGCR6LQ9BY27 220 aa7.05□□□□□ -1.28
CAPN3-213ENST00000565173 FGF23Q9GZV9 251 aaPredicted RBP7.05□□□□□ -1.28
CAPN3-213ENST00000565173 SEMA6AQ9H2E6 1030 aa7.05□□□□□ -1.28
CAPN3-213ENST00000565173 MMP27Q9H306 513 aa7.05□□□□□ -1.28
CAPN3-213ENST00000565173 TOR3AQ9H497 397 aa7.05□□□□□ -1.28
CAPN3-213ENST00000565173 C16orf95Q9H693 158 aa7.05□□□□□ -1.28
CAPN3-213ENST00000565173 MED20Q9H944 212 aa7.05□□□□□ -1.28
CAPN3-213ENST00000565173 TBC1D23Q9NUY8 699 aa7.05□□□□□ -1.28
CAPN3-213ENST00000565173 ARMC1Q9NVT9 282 aa7.05□□□□□ -1.28
CAPN3-213ENST00000565173 ACTR3BQ9P1U1 418 aa7.05□□□□□ -1.28
CAPN3-213ENST00000565173 BAIAP2Q9UQB8 552 aa7.05□□□□□ -1.28
CAPN3-213ENST00000565173 RHBDD3Q9Y3P4 386 aa7.05□□□□□ -1.28
CAPN3-213ENST00000565173 FAM183AA6NL82 134 aa7.04□□□□□ -1.28
CAPN3-213ENST00000565173 RNASEK-C17orf49H0YIS7 233 aa7.04□□□□□ -1.28
CAPN3-213ENST00000565173 CDIPTO14735 213 aa7.04□□□□□ -1.28
CAPN3-213ENST00000565173 GPR37O15354 613 aa7.04□□□□□ -1.28
CAPN3-213ENST00000565173 TBX1O43435 398 aa7.04□□□□□ -1.28
CAPN3-213ENST00000565173 TIPRLO75663 272 aa7.04□□□□□ -1.28
CAPN3-213ENST00000565173 ANXA2P07355 339 aaKnown RBP7.04□□□□□ -1.28
CAPN3-213ENST00000565173 SELLP14151 372 aa7.04□□□□□ -1.28
CAPN3-213ENST00000565173 ACKR3P25106 362 aa7.04□□□□□ -1.28
CAPN3-213ENST00000565173 GSTT1P30711 240 aa7.04□□□□□ -1.28
CAPN3-213ENST00000565173 GRK5P34947 590 aa7.04□□□□□ -1.28
CAPN3-213ENST00000565173 BLVRAP53004 296 aa7.04□□□□□ -1.28
CAPN3-213ENST00000565173 MS4A2Q01362 244 aa7.04□□□□□ -1.28
CAPN3-213ENST00000565173 EIF2B1Q14232 305 aaKnown RBP7.04□□□□□ -1.28
CAPN3-213ENST00000565173 TIGD6Q17RP2 521 aa7.04□□□□□ -1.28
CAPN3-213ENST00000565173 STUMQ69YW2 141 aa7.04□□□□□ -1.28
CAPN3-213ENST00000565173 CD300LDQ6UXZ3 194 aa7.04□□□□□ -1.28
CAPN3-213ENST00000565173 FAM57BQ71RH2 274 aa7.04□□□□□ -1.28
CAPN3-213ENST00000565173 SLC36A1Q7Z2H8 476 aa7.04□□□□□ -1.28
CAPN3-213ENST00000565173 TIGD4Q8IY51 512 aa7.04□□□□□ -1.28
CAPN3-213ENST00000565173 SCCPDHQ8NBX0 429 aa7.04□□□□□ -1.28
CAPN3-213ENST00000565173 OR5T2Q8NGG2 359 aa7.04□□□□□ -1.28
CAPN3-213ENST00000565173 OR52H1Q8NGJ2 320 aa7.04□□□□□ -1.28
CAPN3-213ENST00000565173 C8orf46Q8TAG6 207 aa7.04□□□□□ -1.28
CAPN3-213ENST00000565173 NPRL2Q8WTW4 380 aa7.04□□□□□ -1.28
CAPN3-213ENST00000565173 LYZL4Q96KX0 146 aa7.04□□□□□ -1.28
CAPN3-213ENST00000565173 NIPSNAP1Q9BPW8 284 aa7.04□□□□□ -1.28
CAPN3-213ENST00000565173 DCTN5Q9BTE1 182 aa7.04□□□□□ -1.28
CAPN3-213ENST00000565173 WDR13Q9H1Z4 485 aa7.04□□□□□ -1.28
CAPN3-213ENST00000565173 DPAGT1Q9H3H5 408 aa7.04□□□□□ -1.28
CAPN3-213ENST00000565173 CMC2Q9NRP2 79 aa7.04□□□□□ -1.28
CAPN3-213ENST00000565173 HAO2Q9NYQ3 351 aa7.04□□□□□ -1.28
CAPN3-213ENST00000565173 ZNRD1Q9P1U0 126 aa7.04□□□□□ -1.28
CAPN3-213ENST00000565173 ONECUT1Q9UBC0 465 aa7.04□□□□□ -1.28
CAPN3-213ENST00000565173 PRPF19Q9UMS4 504 aaKnown RBP7.04□□□□□ -1.28
CAPN3-213ENST00000565173 U3KQV3 271 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms