RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 CD5P06127 495 aa18.16■□□□□ 0.5
MAP1LC3B-206ENST00000564844 NTSR1P30989 418 aa18.16■□□□□ 0.5
MAP1LC3B-206ENST00000564844 GSK3AP49840 483 aa18.16■□□□□ 0.5
MAP1LC3B-206ENST00000564844 SGCBQ16585 318 aa18.16■□□□□ 0.5
MAP1LC3B-206ENST00000564844 ADAMTS18Q8TE60 1221 aa18.16■□□□□ 0.5
MAP1LC3B-206ENST00000564844 THRSPQ92748 146 aa18.16■□□□□ 0.5
MAP1LC3B-206ENST00000564844 PBOV1Q9GZY1 135 aa18.16■□□□□ 0.5
MAP1LC3B-206ENST00000564844 PCOLCE2Q9UKZ9 415 aa18.16■□□□□ 0.5
MAP1LC3B-206ENST00000564844 FRYQ5TBA9 3013 aa18.16■□□□□ 0.5
MAP1LC3B-206ENST00000564844 A0A1W2PQF6 199 aa18.16■□□□□ 0.5
MAP1LC3B-206ENST00000564844 ZNF878C9JN71 531 aa18.16■□□□□ 0.5
MAP1LC3B-206ENST00000564844 NPIPA5E9PKD4 350 aa18.16■□□□□ 0.5
MAP1LC3B-206ENST00000564844 KLHL24Q6TFL4 600 aa18.16■□□□□ 0.5
MAP1LC3B-206ENST00000564844 ZNF561Q8N587 486 aa18.16■□□□□ 0.5
MAP1LC3B-206ENST00000564844 ZNF248Q8NDW4 579 aa18.16■□□□□ 0.5
MAP1LC3B-206ENST00000564844 ST7LQ8TDW4 575 aa18.16■□□□□ 0.5
MAP1LC3B-206ENST00000564844 ZNF775Q96BV0 537 aaPredicted RBP18.16■□□□□ 0.5
MAP1LC3B-206ENST00000564844 NPIPA1Q9UND3 350 aa18.16■□□□□ 0.5
MAP1LC3B-206ENST00000564844 PRRC2CQ9Y520 2896 aaKnown RBP18.15■□□□□ 0.5
MAP1LC3B-206ENST00000564844 TRBV6-7A0A0A0MS04 114 aa18.15■□□□□ 0.5
MAP1LC3B-206ENST00000564844 PLPP3O14495 311 aa18.15■□□□□ 0.5
MAP1LC3B-206ENST00000564844 NSA2O95478 260 aaKnown RBP18.15■□□□□ 0.5
MAP1LC3B-206ENST00000564844 IL33O95760 270 aa18.15■□□□□ 0.5
MAP1LC3B-206ENST00000564844 FSTP19883 344 aa18.15■□□□□ 0.5
MAP1LC3B-206ENST00000564844 SNU13P55769 128 aaKnown RBP18.15■□□□□ 0.5
MAP1LC3B-206ENST00000564844 BTNL8Q6UX41 500 aa18.15■□□□□ 0.5
MAP1LC3B-206ENST00000564844 GKN2Q86XP6 184 aa18.15■□□□□ 0.5
MAP1LC3B-206ENST00000564844 SLAMF6Q96DU3 332 aa18.15■□□□□ 0.5
MAP1LC3B-206ENST00000564844 C2orf50Q96LR7 162 aa18.15■□□□□ 0.5
MAP1LC3B-206ENST00000564844 PFDN5Q99471 154 aa18.15■□□□□ 0.5
MAP1LC3B-206ENST00000564844 IGHV3-20A0A0C4DH32 117 aa18.15■□□□□ 0.5
MAP1LC3B-206ENST00000564844 UBE2CO00762 179 aa18.15■□□□□ 0.5
MAP1LC3B-206ENST00000564844 AHSA1O95433 338 aa18.15■□□□□ 0.5
MAP1LC3B-206ENST00000564844 S100A8P05109 93 aa18.15■□□□□ 0.5
MAP1LC3B-206ENST00000564844 RAB5AP20339 215 aa18.15■□□□□ 0.5
MAP1LC3B-206ENST00000564844 LAP3P28838 519 aa18.15■□□□□ 0.5
MAP1LC3B-206ENST00000564844 DVL1P1P54792 670 aaPredicted RBP18.15■□□□□ 0.5
MAP1LC3B-206ENST00000564844 TOMM20Q15388 145 aa18.15■□□□□ 0.5
MAP1LC3B-206ENST00000564844 PHF19Q5T6S3 580 aa18.15■□□□□ 0.5
MAP1LC3B-206ENST00000564844 TSPO2Q5TGU0 170 aa18.15■□□□□ 0.5
MAP1LC3B-206ENST00000564844 HLA-DQA1Q5Y7H0 255 aa18.15■□□□□ 0.5
MAP1LC3B-206ENST00000564844 C1QL2Q7Z5L3 287 aa18.15■□□□□ 0.5
MAP1LC3B-206ENST00000564844 C15orf54Q8N8G6 183 aa18.15■□□□□ 0.5
MAP1LC3B-206ENST00000564844 OR10H5Q8NGA6 315 aa18.15■□□□□ 0.5
MAP1LC3B-206ENST00000564844 RHOVQ96L33 236 aa18.15■□□□□ 0.5
MAP1LC3B-206ENST00000564844 HDHD3Q9BSH5 251 aaPredicted RBP18.15■□□□□ 0.5
MAP1LC3B-206ENST00000564844 SH3BGRL3Q9H299 93 aa18.15■□□□□ 0.5
MAP1LC3B-206ENST00000564844 ZNF727A8MUV8 499 aa18.14■□□□□ 0.5
MAP1LC3B-206ENST00000564844 NUDT21O43809 227 aaKnown RBP18.14■□□□□ 0.5
MAP1LC3B-206ENST00000564844 ZNF708P17019 499 aa18.14■□□□□ 0.5
MAP1LC3B-206ENST00000564844 RPS10P46783 165 aaKnown RBP18.14■□□□□ 0.5
MAP1LC3B-206ENST00000564844 GFERP55789 205 aa18.14■□□□□ 0.5
MAP1LC3B-206ENST00000564844 SLC22A18ASQ8N1D0 253 aa18.14■□□□□ 0.5
MAP1LC3B-206ENST00000564844 ZNF565Q8N9K5 539 aa18.14■□□□□ 0.5
MAP1LC3B-206ENST00000564844 OR5D14Q8NGL3 314 aa18.14■□□□□ 0.5
MAP1LC3B-206ENST00000564844 TGM7Q96PF1 710 aa18.14■□□□□ 0.5
MAP1LC3B-206ENST00000564844 TMEM59Q9BXS4 323 aa18.14■□□□□ 0.5
MAP1LC3B-206ENST00000564844 PMS2P1A4D2B8 440 aa18.14■□□□□ 0.49
MAP1LC3B-206ENST00000564844 UMAD1C9J7I0 102 aa18.14■□□□□ 0.49
MAP1LC3B-206ENST00000564844 HNRNPA2B1P22626 353 aaKnown RBP18.14■□□□□ 0.49
MAP1LC3B-206ENST00000564844 QRFPP83859 136 aa18.14■□□□□ 0.49
MAP1LC3B-206ENST00000564844 PLCXD2Q0VAA5 305 aa18.14■□□□□ 0.49
MAP1LC3B-206ENST00000564844 TMEM240Q5SV17 173 aa18.14■□□□□ 0.49
MAP1LC3B-206ENST00000564844 TOMM40LQ969M1 308 aa18.14■□□□□ 0.49
MAP1LC3B-206ENST00000564844 C5orf63A6NC05 138 aa18.14■□□□□ 0.49
MAP1LC3B-206ENST00000564844 SRSF10O75494 262 aaKnown RBP18.14■□□□□ 0.49
MAP1LC3B-206ENST00000564844 GUK1Q16774 197 aa18.14■□□□□ 0.49
MAP1LC3B-206ENST00000564844 OR51T1Q8NGJ9 327 aa18.14■□□□□ 0.49
MAP1LC3B-206ENST00000564844 C11orf40Q8WZ69 217 aa18.14■□□□□ 0.49
MAP1LC3B-206ENST00000564844 AQP10Q96PS8 301 aa18.14■□□□□ 0.49
MAP1LC3B-206ENST00000564844 PAPOLGQ9BWT3 736 aaKnown RBP18.14■□□□□ 0.49
MAP1LC3B-206ENST00000564844 OR51M1Q9H341 326 aa18.14■□□□□ 0.49
MAP1LC3B-206ENST00000564844 ZNF319Q9P2F9 582 aa18.14■□□□□ 0.49
MAP1LC3B-206ENST00000564844 IGKV1D-8A0A087WSZ0 117 aa18.13■□□□□ 0.49
MAP1LC3B-206ENST00000564844 MFNGO00587 321 aa18.13■□□□□ 0.49
MAP1LC3B-206ENST00000564844 MT-ND4LP03901 98 aa18.13■□□□□ 0.49
MAP1LC3B-206ENST00000564844 SERPINA2P20848 420 aa18.13■□□□□ 0.49
MAP1LC3B-206ENST00000564844 CFPP27918 469 aa18.13■□□□□ 0.49
MAP1LC3B-206ENST00000564844 TAS2R31P59538 309 aa18.13■□□□□ 0.49
MAP1LC3B-206ENST00000564844 NKAIN3Q8N8D7 197 aa18.13■□□□□ 0.49
MAP1LC3B-206ENST00000564844 OR9K2Q8NGE7 335 aa18.13■□□□□ 0.49
MAP1LC3B-206ENST00000564844 MRPL38Q96DV4 380 aaKnown RBP18.13■□□□□ 0.49
MAP1LC3B-206ENST00000564844 LIN37Q96GY3 246 aaPredicted RBP18.13■□□□□ 0.49
MAP1LC3B-206ENST00000564844 RAB18Q9NP72 206 aa18.13■□□□□ 0.49
MAP1LC3B-206ENST00000564844 CCDC163A0A0D9SF12 145 aa18.13■□□□□ 0.49
MAP1LC3B-206ENST00000564844 H7C1Q1 480 aa18.13■□□□□ 0.49
MAP1LC3B-206ENST00000564844 MFAP5Q13361 173 aa18.13■□□□□ 0.49
MAP1LC3B-206ENST00000564844 PNLIPRP3Q17RR3 467 aa18.13■□□□□ 0.49
MAP1LC3B-206ENST00000564844 C1orf189Q5VU69 101 aa18.13■□□□□ 0.49
MAP1LC3B-206ENST00000564844 AADACL3Q5VUY0 350 aa18.13■□□□□ 0.49
MAP1LC3B-206ENST00000564844 FAHD2BQ6P2I3 314 aaPredicted RBP18.13■□□□□ 0.49
MAP1LC3B-206ENST00000564844 LYPD6Q86Y78 171 aa18.13■□□□□ 0.49
MAP1LC3B-206ENST00000564844 MRPL24Q96A35 216 aaKnown RBP18.13■□□□□ 0.49
MAP1LC3B-206ENST00000564844 SAT2Q96F10 170 aaPredicted RBP18.13■□□□□ 0.49
MAP1LC3B-206ENST00000564844 FAHD2AQ96GK7 314 aa18.13■□□□□ 0.49
MAP1LC3B-206ENST00000564844 WDFY4Q6ZS81 3184 aa18.12■□□□□ 0.49
MAP1LC3B-206ENST00000564844 HIST1H1DP16402 221 aaKnown RBP18.12■□□□□ 0.49
MAP1LC3B-206ENST00000564844 BTF3P20290 206 aaKnown RBP18.12■□□□□ 0.49
MAP1LC3B-206ENST00000564844 CRABP1P29762 137 aa18.12■□□□□ 0.49
MAP1LC3B-206ENST00000564844 CAMLGP49069 296 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms