RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 FAM3AP98173 230 aa15.38■□□□□ 0.05
CLN6-204ENST00000564752 LCN1P1Q5VSP4 162 aa15.38■□□□□ 0.05
CLN6-204ENST00000564752 PRSS45Q7RTY3 260 aa15.38■□□□□ 0.05
CLN6-204ENST00000564752 C19orf18Q8NEA5 215 aa15.38■□□□□ 0.05
CLN6-204ENST00000564752 OR8S1Q8NH09 359 aa15.38■□□□□ 0.05
CLN6-204ENST00000564752 PRDM13Q9H4Q3 707 aa15.38■□□□□ 0.05
CLN6-204ENST00000564752 LAMP5Q9UJQ1 280 aa15.38■□□□□ 0.05
CLN6-204ENST00000564752 AP4S1Q9Y587 144 aa15.38■□□□□ 0.05
CLN6-204ENST00000564752 CMYA5Q8N3K9 4069 aa15.38■□□□□ 0.05
CLN6-204ENST00000564752 hCG_38984A0A1B0GV85 526 aa15.37■□□□□ 0.05
CLN6-204ENST00000564752 A6NLC8 198 aa15.37■□□□□ 0.05
CLN6-204ENST00000564752 PTBP3O95758 552 aaKnown RBP15.37■□□□□ 0.05
CLN6-204ENST00000564752 PTGES3Q15185 160 aaKnown RBP15.37■□□□□ 0.05
CLN6-204ENST00000564752 C16orf87Q6PH81 154 aa15.37■□□□□ 0.05
CLN6-204ENST00000564752 ZDHHC13Q8IUH4 622 aa15.37■□□□□ 0.05
CLN6-204ENST00000564752 PLPP7Q8NBV4 271 aa15.37■□□□□ 0.05
CLN6-204ENST00000564752 TAF15Q92804 592 aaKnown RBP eCLIP15.37■□□□□ 0.05
CLN6-204ENST00000564752 SGK3Q96BR1 496 aa15.37■□□□□ 0.05
CLN6-204ENST00000564752 RGCCQ9H4X1 137 aa15.37■□□□□ 0.05
CLN6-204ENST00000564752 C14orf119Q9NWQ9 140 aa15.37■□□□□ 0.05
CLN6-204ENST00000564752 RNF7Q9UBF6 113 aa15.37■□□□□ 0.05
CLN6-204ENST00000564752 KLHDC2Q9Y2U9 406 aa15.37■□□□□ 0.05
CLN6-204ENST00000564752 MDFIC2A0A1B0GVS7 189 aa15.36■□□□□ 0.05
CLN6-204ENST00000564752 C22orf46C9J442 243 aa15.36■□□□□ 0.05
CLN6-204ENST00000564752 MITFO75030 526 aaPredicted RBP15.36■□□□□ 0.05
CLN6-204ENST00000564752 GRPP07492 148 aa15.36■□□□□ 0.05
CLN6-204ENST00000564752 MRPL3P09001 348 aaKnown RBP15.36■□□□□ 0.05
CLN6-204ENST00000564752 NPY4RP50391 375 aa15.36■□□□□ 0.05
CLN6-204ENST00000564752 BPIFB3P59826 476 aa15.36■□□□□ 0.05
CLN6-204ENST00000564752 PSMA6P60900 246 aaKnown RBP15.36■□□□□ 0.05
CLN6-204ENST00000564752 FGF12P61328 243 aa15.36■□□□□ 0.05
CLN6-204ENST00000564752 HOXA4Q00056 320 aaPredicted RBP15.36■□□□□ 0.05
CLN6-204ENST00000564752 KRT77Q7Z794 578 aa15.36■□□□□ 0.05
CLN6-204ENST00000564752 FTMTQ8N4E7 242 aa15.36■□□□□ 0.05
CLN6-204ENST00000564752 BOLLQ8N9W6 283 aaKnown RBP15.36■□□□□ 0.05
CLN6-204ENST00000564752 PAPOLGQ9BWT3 736 aaKnown RBP15.36■□□□□ 0.05
CLN6-204ENST00000564752 YIPF3Q9GZM5 350 aa15.36■□□□□ 0.05
CLN6-204ENST00000564752 GABARAPL1Q9H0R8 117 aa15.36■□□□□ 0.05
CLN6-204ENST00000564752 NIPAL2Q9H841 368 aa15.36■□□□□ 0.05
CLN6-204ENST00000564752 C1orf123Q9NWV4 160 aa15.36■□□□□ 0.05
CLN6-204ENST00000564752 ZNF319Q9P2F9 582 aa15.36■□□□□ 0.05
CLN6-204ENST00000564752 LRP12Q9Y561 859 aa15.36■□□□□ 0.05
CLN6-204ENST00000564752 DOCK11Q5JSL3 2073 aa15.36■□□□□ 0.05
CLN6-204ENST00000564752 hCG_1807616A0A1W2PRN6 198 aa15.35■□□□□ 0.05
CLN6-204ENST00000564752 CCDC182A6NF36 153 aa15.35■□□□□ 0.05
CLN6-204ENST00000564752 TNFRSF13BO14836 293 aaPredicted RBP15.35■□□□□ 0.05
CLN6-204ENST00000564752 ENSAO43768 121 aaKnown RBP15.35■□□□□ 0.05
CLN6-204ENST00000564752 PRKYO43930 277 aa15.35■□□□□ 0.05
CLN6-204ENST00000564752 ALOX5APP20292 161 aa15.35■□□□□ 0.05
CLN6-204ENST00000564752 GNALP38405 381 aa15.35■□□□□ 0.05
CLN6-204ENST00000564752 GSK3AP49840 483 aa15.35■□□□□ 0.05
CLN6-204ENST00000564752 KCNJ8Q15842 424 aa15.35■□□□□ 0.05
CLN6-204ENST00000564752 SNCBQ16143 134 aa15.35■□□□□ 0.05
CLN6-204ENST00000564752 DEFB112Q30KQ8 113 aa15.35■□□□□ 0.05
CLN6-204ENST00000564752 BRD3OSQ6XYD6 125 aa15.35■□□□□ 0.05
CLN6-204ENST00000564752 AMIGO2Q86SJ2 522 aa15.35■□□□□ 0.05
CLN6-204ENST00000564752 CSNK2A3Q8NEV1 391 aa15.35■□□□□ 0.05
CLN6-204ENST00000564752 LRTOMTQ8WZ04 291 aa15.35■□□□□ 0.05
CLN6-204ENST00000564752 DUS3LQ96G46 650 aaKnown RBP15.35■□□□□ 0.05
CLN6-204ENST00000564752 ENOPH1Q9UHY7 261 aa15.35■□□□□ 0.05
CLN6-204ENST00000564752 M0R129 80 aa15.34■□□□□ 0.05
CLN6-204ENST00000564752 LGALS8O00214 317 aa15.34■□□□□ 0.05
CLN6-204ENST00000564752 HOXA3O43365 443 aaPredicted RBP15.34■□□□□ 0.05
CLN6-204ENST00000564752 OR8B8Q15620 311 aa15.34■□□□□ 0.05
CLN6-204ENST00000564752 GPR157Q5UAW9 335 aa15.34■□□□□ 0.05
CLN6-204ENST00000564752 SLX4IPQ5VYV7 408 aa15.34■□□□□ 0.05
CLN6-204ENST00000564752 CD276Q5ZPR3 534 aa15.34■□□□□ 0.05
CLN6-204ENST00000564752 KDM4DQ6B0I6 523 aa15.34■□□□□ 0.05
CLN6-204ENST00000564752 SFRP4Q6FHJ7 346 aaPredicted RBP15.34■□□□□ 0.05
CLN6-204ENST00000564752 KCTD18Q6PI47 426 aaPredicted RBP15.34■□□□□ 0.05
CLN6-204ENST00000564752 TMIGD2Q96BF3 282 aa15.34■□□□□ 0.05
CLN6-204ENST00000564752 CNN2Q99439 309 aaKnown RBP15.34■□□□□ 0.05
CLN6-204ENST00000564752 TEAD3Q99594 435 aa15.34■□□□□ 0.05
CLN6-204ENST00000564752 SLITRK2Q9H156 845 aa15.34■□□□□ 0.05
CLN6-204ENST00000564752 TRIM36Q9NQ86 728 aa15.34■□□□□ 0.05
CLN6-204ENST00000564752 ERVK-18Q9QC07 812 aa15.34■□□□□ 0.05
CLN6-204ENST00000564752 CTSZQ9UBR2 303 aa15.34■□□□□ 0.05
CLN6-204ENST00000564752 ANXA2P2A6NMY6 339 aa15.33■□□□□ 0.04
CLN6-204ENST00000564752 ZAR1LA6NP61 321 aa15.33■□□□□ 0.04
CLN6-204ENST00000564752 C3orf80F5H4A9 247 aa15.33■□□□□ 0.04
CLN6-204ENST00000564752 LIPFP07098 398 aa15.33■□□□□ 0.04
CLN6-204ENST00000564752 MDKP21741 143 aaPredicted RBP15.33■□□□□ 0.04
CLN6-204ENST00000564752 HCCSP53701 268 aa15.33■□□□□ 0.04
CLN6-204ENST00000564752 ZNF826PQ6ZT77 177 aa15.33■□□□□ 0.04
CLN6-204ENST00000564752 TCEANCQ8N8B7 351 aa15.33■□□□□ 0.04
CLN6-204ENST00000564752 OR8B12Q8NGG6 310 aa15.33■□□□□ 0.04
CLN6-204ENST00000564752 ZDHHC16Q969W1 377 aa15.33■□□□□ 0.04
CLN6-204ENST00000564752 TECTBQ96PL2 329 aa15.33■□□□□ 0.04
CLN6-204ENST00000564752 MROQ9BYG7 248 aa15.33■□□□□ 0.04
CLN6-204ENST00000564752 NOX4Q9NPH5 578 aa15.33■□□□□ 0.04
CLN6-204ENST00000564752 ZNF391Q9UJN7 358 aa15.33■□□□□ 0.04
CLN6-204ENST00000564752 MMP24Q9Y5R2 645 aa15.33■□□□□ 0.04
CLN6-204ENST00000564752 TMEM14AQ9Y6G1 99 aa15.33■□□□□ 0.04
CLN6-204ENST00000564752 TRAV38-1A0A0B4J264 116 aa15.32■□□□□ 0.04
CLN6-204ENST00000564752 OOEPA6NGQ2 149 aa15.32■□□□□ 0.04
CLN6-204ENST00000564752 SLC22A31A6NKX4 558 aa15.32■□□□□ 0.04
CLN6-204ENST00000564752 SRRM5B3KS81 715 aa15.32■□□□□ 0.04
CLN6-204ENST00000564752 ZNF879B4DU55 563 aa15.32■□□□□ 0.04
CLN6-204ENST00000564752 PSMD9O00233 223 aa15.32■□□□□ 0.04
CLN6-204ENST00000564752 NDUFA2O43678 99 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms