RNA–Protein interactions for RNA: ENST00000563798.1

VPS9D1-203, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-203ENST00000563798 GALNT4Q8N4A0 578 aa14.24□□□□□ -0.13
VPS9D1-203ENST00000563798 IQCF1Q8N6M8 205 aa14.24□□□□□ -0.13
VPS9D1-203ENST00000563798 OTOSQ8NHW6 89 aa14.24□□□□□ -0.13
VPS9D1-203ENST00000563798 ZDHHC16Q969W1 377 aa14.24□□□□□ -0.13
VPS9D1-203ENST00000563798 TMIGD2Q96BF3 282 aa14.24□□□□□ -0.13
VPS9D1-203ENST00000563798 C12orf43Q96C57 262 aaKnown RBP14.24□□□□□ -0.13
VPS9D1-203ENST00000563798 LRGUKQ96M69 825 aa14.24□□□□□ -0.13
VPS9D1-203ENST00000563798 RASSF4Q9H2L5 321 aa14.24□□□□□ -0.13
VPS9D1-203ENST00000563798 POMT1Q9Y6A1 747 aa14.24□□□□□ -0.13
VPS9D1-203ENST00000563798 hCG_1807616A0A1W2PRN6 198 aa14.23□□□□□ -0.13
VPS9D1-203ENST00000563798 H3BN98 237 aa14.23□□□□□ -0.13
VPS9D1-203ENST00000563798 GPR37O15354 613 aa14.23□□□□□ -0.13
VPS9D1-203ENST00000563798 PRODHO43272 600 aa14.23□□□□□ -0.13
VPS9D1-203ENST00000563798 PAICSP22234 425 aaKnown RBP14.23□□□□□ -0.13
VPS9D1-203ENST00000563798 NAA10P41227 235 aaPredicted RBP14.23□□□□□ -0.13
VPS9D1-203ENST00000563798 RPL15P61313 204 aaKnown RBP14.23□□□□□ -0.13
VPS9D1-203ENST00000563798 MICBQ29980 383 aa14.23□□□□□ -0.13
VPS9D1-203ENST00000563798 FAM76BQ5HYJ3 339 aa14.23□□□□□ -0.13
VPS9D1-203ENST00000563798 ATPAF1Q5TC12 328 aaPredicted RBP14.23□□□□□ -0.13
VPS9D1-203ENST00000563798 METTL11BQ5VVY1 283 aa14.23□□□□□ -0.13
VPS9D1-203ENST00000563798 FAM57BQ71RH2 274 aa14.23□□□□□ -0.13
VPS9D1-203ENST00000563798 BTN2A1Q7KYR7 527 aa14.23□□□□□ -0.13
VPS9D1-203ENST00000563798 TMEM179BQ7Z7N9 219 aa14.23□□□□□ -0.13
VPS9D1-203ENST00000563798 FTMTQ8N4E7 242 aa14.23□□□□□ -0.13
VPS9D1-203ENST00000563798 CCDC197Q8NCU1 140 aa14.23□□□□□ -0.13
VPS9D1-203ENST00000563798 LY6G5BQ8NDX9 201 aa14.23□□□□□ -0.13
VPS9D1-203ENST00000563798 LRRC29Q8WV35 223 aa14.23□□□□□ -0.13
VPS9D1-203ENST00000563798 GATAD2BQ8WXI9 593 aa14.23□□□□□ -0.13
VPS9D1-203ENST00000563798 ITFG2Q969R8 447 aa14.23□□□□□ -0.13
VPS9D1-203ENST00000563798 ITPKCQ96DU7 683 aa14.23□□□□□ -0.13
VPS9D1-203ENST00000563798 ABCB9Q9NP78 766 aa14.23□□□□□ -0.13
VPS9D1-203ENST00000563798 RPUSD1Q9UJJ7 312 aaKnown RBP14.23□□□□□ -0.13
VPS9D1-203ENST00000563798 ZNF391Q9UJN7 358 aa14.23□□□□□ -0.13
VPS9D1-203ENST00000563798 RHBDD3Q9Y3P4 386 aa14.23□□□□□ -0.13
VPS9D1-203ENST00000563798 MPC1Q9Y5U8 109 aa14.23□□□□□ -0.13
VPS9D1-203ENST00000563798 KPTNQ9Y664 436 aa14.23□□□□□ -0.13
VPS9D1-203ENST00000563798 IGHV1-69DA0A0B4J2H0 117 aa14.22□□□□□ -0.13
VPS9D1-203ENST00000563798 CST4P01036 141 aa14.22□□□□□ -0.13
VPS9D1-203ENST00000563798 IGHV1-69P01742 117 aa14.22□□□□□ -0.13
VPS9D1-203ENST00000563798 HMGN1P05114 100 aa14.22□□□□□ -0.13
VPS9D1-203ENST00000563798 MELTFP08582 738 aa14.22□□□□□ -0.13
VPS9D1-203ENST00000563798 H2BFMP0C1H6 154 aa14.22□□□□□ -0.13
VPS9D1-203ENST00000563798 MDKP21741 143 aaPredicted RBP14.22□□□□□ -0.13
VPS9D1-203ENST00000563798 CDK5Q00535 292 aa14.22□□□□□ -0.13
VPS9D1-203ENST00000563798 IL5RAQ01344 420 aa14.22□□□□□ -0.13
VPS9D1-203ENST00000563798 GINS1Q14691 196 aa14.22□□□□□ -0.13
VPS9D1-203ENST00000563798 RUSC1-AS1Q66K80 236 aa14.22□□□□□ -0.13
VPS9D1-203ENST00000563798 OR10Z1Q8NGY1 313 aa14.22□□□□□ -0.13
VPS9D1-203ENST00000563798 CANT1Q8WVQ1 401 aa14.22□□□□□ -0.13
VPS9D1-203ENST00000563798 DNTTIP1Q9H147 329 aa14.22□□□□□ -0.13
VPS9D1-203ENST00000563798 NIPAL2Q9H841 368 aa14.22□□□□□ -0.13
VPS9D1-203ENST00000563798 CNTD2Q9H8S5 307 aa14.22□□□□□ -0.13
VPS9D1-203ENST00000563798 ACOXLQ9NUZ1 547 aa14.22□□□□□ -0.13
VPS9D1-203ENST00000563798 IGHV3OR15-7A0A075B7D8 119 aa14.21□□□□□ -0.13
VPS9D1-203ENST00000563798 FAM181BA6NEQ2 426 aa14.21□□□□□ -0.13
VPS9D1-203ENST00000563798 PRR23D1E9PI22 279 aaPredicted RBP14.21□□□□□ -0.13
VPS9D1-203ENST00000563798 WIPF1O43516 503 aa14.21□□□□□ -0.13
VPS9D1-203ENST00000563798 NDUFA7O95182 113 aa14.21□□□□□ -0.13
VPS9D1-203ENST00000563798 LYNP07948 512 aa14.21□□□□□ -0.13
VPS9D1-203ENST00000563798 PRR23D2P0DMB1 279 aaPredicted RBP14.21□□□□□ -0.13
VPS9D1-203ENST00000563798 OSMP13725 252 aa14.21□□□□□ -0.13
VPS9D1-203ENST00000563798 GNALP38405 381 aa14.21□□□□□ -0.13
VPS9D1-203ENST00000563798 TGM4P49221 684 aa14.21□□□□□ -0.13
VPS9D1-203ENST00000563798 CSNK2BP67870 215 aa14.21□□□□□ -0.13
VPS9D1-203ENST00000563798 CDONQ4KMG0 1287 aa14.21□□□□□ -0.13
VPS9D1-203ENST00000563798 SLC35D3Q5M8T2 416 aa14.21□□□□□ -0.13
VPS9D1-203ENST00000563798 PLBD1Q6P4A8 553 aa14.21□□□□□ -0.13
VPS9D1-203ENST00000563798 METAP1DQ6UB28 335 aaPredicted RBP14.21□□□□□ -0.13
VPS9D1-203ENST00000563798 SLC36A1Q7Z2H8 476 aa14.21□□□□□ -0.13
VPS9D1-203ENST00000563798 CCDC124Q96CT7 223 aaKnown RBP14.21□□□□□ -0.13
VPS9D1-203ENST00000563798 PGAM5Q96HS1 289 aa14.21□□□□□ -0.13
VPS9D1-203ENST00000563798 CLPTM1LQ96KA5 538 aa14.21□□□□□ -0.13
VPS9D1-203ENST00000563798 MICU1Q9BPX6 476 aa14.21□□□□□ -0.13
VPS9D1-203ENST00000563798 OR51V1Q9H2C8 321 aa14.21□□□□□ -0.13
VPS9D1-203ENST00000563798 PPP1R3EQ9H7J1 279 aa14.21□□□□□ -0.13
VPS9D1-203ENST00000563798 DNAJC27Q9NZQ0 273 aa14.21□□□□□ -0.13
VPS9D1-203ENST00000563798 PDP1Q9P0J1 537 aaPredicted RBP14.21□□□□□ -0.13
VPS9D1-203ENST00000563798 TMEM210A6NLX4 147 aa14.2□□□□□ -0.14
VPS9D1-203ENST00000563798 ANXA2P2A6NMY6 339 aa14.2□□□□□ -0.14
VPS9D1-203ENST00000563798 CDIPTO14735 213 aa14.2□□□□□ -0.14
VPS9D1-203ENST00000563798 AMY2BP19961 511 aa14.2□□□□□ -0.14
VPS9D1-203ENST00000563798 SLC2A5P22732 501 aa14.2□□□□□ -0.14
VPS9D1-203ENST00000563798 ACKR3P25106 362 aa14.2□□□□□ -0.14
VPS9D1-203ENST00000563798 ARF6P62330 175 aa14.2□□□□□ -0.14
VPS9D1-203ENST00000563798 POU4F2Q12837 409 aa14.2□□□□□ -0.14
VPS9D1-203ENST00000563798 WDR38Q5JTN6 314 aa14.2□□□□□ -0.14
VPS9D1-203ENST00000563798 LDLRAD3Q86YD5 345 aa14.2□□□□□ -0.14
VPS9D1-203ENST00000563798 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.2□□□□□ -0.14
VPS9D1-203ENST00000563798 KIR3DL3Q8N743 410 aa14.2□□□□□ -0.14
VPS9D1-203ENST00000563798 OR4F5Q8NH21 305 aa14.2□□□□□ -0.14
VPS9D1-203ENST00000563798 C8orf46Q8TAG6 207 aa14.2□□□□□ -0.14
VPS9D1-203ENST00000563798 SSMEM1Q8WWF3 244 aa14.2□□□□□ -0.14
VPS9D1-203ENST00000563798 OR5P3Q8WZ94 311 aa14.2□□□□□ -0.14
VPS9D1-203ENST00000563798 TAF15Q92804 592 aaKnown RBP eCLIP14.2□□□□□ -0.14
VPS9D1-203ENST00000563798 OTULINQ96BN8 352 aa14.2□□□□□ -0.14
VPS9D1-203ENST00000563798 CCL13Q99616 98 aa14.2□□□□□ -0.14
VPS9D1-203ENST00000563798 RTL8AQ9BWD3 113 aa14.2□□□□□ -0.14
VPS9D1-203ENST00000563798 PAPOLGQ9BWT3 736 aaKnown RBP14.2□□□□□ -0.14
VPS9D1-203ENST00000563798 CHIAQ9BZP6 476 aa14.2□□□□□ -0.14
VPS9D1-203ENST00000563798 C1RLQ9NZP8 487 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms