RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 PTH2Q96A98 100 aa4.31□□□□□ -1.72
VPS35P1-201ENST00000563400 ADGRG7Q96K78 797 aa4.31□□□□□ -1.72
VPS35P1-201ENST00000563400 METTL9Q9H1A3 318 aa4.31□□□□□ -1.72
VPS35P1-201ENST00000563400 NT5DC2Q9H857 520 aa4.31□□□□□ -1.72
VPS35P1-201ENST00000563400 INTS9Q9NV88 658 aaKnown RBP4.31□□□□□ -1.72
VPS35P1-201ENST00000563400 LGALS13Q9UHV8 139 aa4.31□□□□□ -1.72
VPS35P1-201ENST00000563400 GNPTGQ9UJJ9 305 aa4.31□□□□□ -1.72
VPS35P1-201ENST00000563400 COPS3Q9UNS2 423 aa4.31□□□□□ -1.72
VPS35P1-201ENST00000563400 SLC22A13Q9Y226 551 aa4.31□□□□□ -1.72
VPS35P1-201ENST00000563400 MIA3Q5JRA6 1907 aa4.3□□□□□ -1.72
VPS35P1-201ENST00000563400 SPTY2D1-AS1A0A0U1RR47 76 aa4.3□□□□□ -1.72
VPS35P1-201ENST00000563400 SLC5A10A0PJK1 596 aa4.3□□□□□ -1.72
VPS35P1-201ENST00000563400 ANKRD20A5PA0PJZ0 165 aa4.3□□□□□ -1.72
VPS35P1-201ENST00000563400 USP27XA6NNY8 438 aa4.3□□□□□ -1.72
VPS35P1-201ENST00000563400 EFCAB7A8K855 629 aa4.3□□□□□ -1.72
VPS35P1-201ENST00000563400 SEC14L6B5MCN3 397 aa4.3□□□□□ -1.72
VPS35P1-201ENST00000563400 PLPP3O14495 311 aa4.3□□□□□ -1.72
VPS35P1-201ENST00000563400 FGF16O43320 207 aa4.3□□□□□ -1.72
VPS35P1-201ENST00000563400 TGOLN2O43493 480 aa4.3□□□□□ -1.72
VPS35P1-201ENST00000563400 MPZL2O60487 215 aa4.3□□□□□ -1.72
VPS35P1-201ENST00000563400 SRP72O76094 671 aaKnown RBP4.3□□□□□ -1.72
VPS35P1-201ENST00000563400 IFNA14P01570 189 aa4.3□□□□□ -1.72
VPS35P1-201ENST00000563400 NQO1P15559 274 aaKnown RBP4.3□□□□□ -1.72
VPS35P1-201ENST00000563400 OGNP20774 298 aaKnown RBP4.3□□□□□ -1.72
VPS35P1-201ENST00000563400 CSRP1P21291 193 aaKnown RBP4.3□□□□□ -1.72
VPS35P1-201ENST00000563400 RPL22P35268 128 aaKnown RBP4.3□□□□□ -1.72
VPS35P1-201ENST00000563400 SPRP35270 261 aaPredicted RBP4.3□□□□□ -1.72
VPS35P1-201ENST00000563400 DRD3P35462 400 aa4.3□□□□□ -1.72
VPS35P1-201ENST00000563400 YAP1P46937 504 aaKnown RBP4.3□□□□□ -1.72
VPS35P1-201ENST00000563400 STC1P52823 247 aa4.3□□□□□ -1.72
VPS35P1-201ENST00000563400 FOXG1P55316 489 aaPredicted RBP4.3□□□□□ -1.72
VPS35P1-201ENST00000563400 ARF6P62330 175 aa4.3□□□□□ -1.72
VPS35P1-201ENST00000563400 EIF3IQ13347 325 aaKnown RBP4.3□□□□□ -1.72
VPS35P1-201ENST00000563400 ASAH1Q13510 395 aa4.3□□□□□ -1.72
VPS35P1-201ENST00000563400 ABRAXAS2Q15018 415 aa4.3□□□□□ -1.72
VPS35P1-201ENST00000563400 BSXQ3C1V8 233 aa4.3□□□□□ -1.72
VPS35P1-201ENST00000563400 SIRPB2Q5JXA9 342 aa4.3□□□□□ -1.72
VPS35P1-201ENST00000563400 KRTAP5-3Q6L8H2 238 aa4.3□□□□□ -1.72
VPS35P1-201ENST00000563400 NIPAL1Q6NVV3 410 aa4.3□□□□□ -1.72
VPS35P1-201ENST00000563400 DRAM2Q6UX65 266 aa4.3□□□□□ -1.72
VPS35P1-201ENST00000563400 ZNF782Q6ZMW2 699 aaPredicted RBP4.3□□□□□ -1.72
VPS35P1-201ENST00000563400 C16orf82Q7Z2V1 217 aa4.3□□□□□ -1.72
VPS35P1-201ENST00000563400 FAM19A1Q7Z5A9 133 aa4.3□□□□□ -1.72
VPS35P1-201ENST00000563400 PRSS58Q8IYP2 241 aa4.3□□□□□ -1.72
VPS35P1-201ENST00000563400 PRR22Q8IZ63 422 aa4.3□□□□□ -1.72
VPS35P1-201ENST00000563400 SUMF1Q8NBK3 374 aa4.3□□□□□ -1.72
VPS35P1-201ENST00000563400 DUSP18Q8NEJ0 188 aa4.3□□□□□ -1.72
VPS35P1-201ENST00000563400 OR6F1Q8NGZ6 308 aa4.3□□□□□ -1.72
VPS35P1-201ENST00000563400 OR10G6Q8NH81 332 aa4.3□□□□□ -1.72
VPS35P1-201ENST00000563400 OR5AK3PQ8NH89 298 aa4.3□□□□□ -1.72
VPS35P1-201ENST00000563400 RASL10AQ92737 203 aa4.3□□□□□ -1.72
VPS35P1-201ENST00000563400 SARAFQ96BY9 339 aa4.3□□□□□ -1.72
VPS35P1-201ENST00000563400 MOCOSQ96EN8 888 aa4.3□□□□□ -1.72
VPS35P1-201ENST00000563400 ADTRPQ96IZ2 230 aa4.3□□□□□ -1.72
VPS35P1-201ENST00000563400 COL21A1Q96P44 957 aa4.3□□□□□ -1.72
VPS35P1-201ENST00000563400 FAM173AQ9BQD7 235 aa4.3□□□□□ -1.72
VPS35P1-201ENST00000563400 RHBDL2Q9NX52 303 aa4.3□□□□□ -1.72
VPS35P1-201ENST00000563400 BABAM2Q9NXR7 383 aa4.3□□□□□ -1.72
VPS35P1-201ENST00000563400 TAS2R13Q9NYV9 303 aa4.3□□□□□ -1.72
VPS35P1-201ENST00000563400 HS3ST3B1Q9Y662 390 aa4.3□□□□□ -1.72
VPS35P1-201ENST00000563400 SELENOKQ9Y6D0 94 aa4.3□□□□□ -1.72
VPS35P1-201ENST00000563400 V9GYQ6 96 aa4.3□□□□□ -1.72
VPS35P1-201ENST00000563400 TICRRQ7Z2Z1 1910 aa4.3□□□□□ -1.72
VPS35P1-201ENST00000563400 DOCK6Q96HP0 2047 aa4.3□□□□□ -1.72
VPS35P1-201ENST00000563400 TRANK1O15050 2925 aa4.29□□□□□ -1.72
VPS35P1-201ENST00000563400 A0A1B0GU03 582 aa4.29□□□□□ -1.72
VPS35P1-201ENST00000563400 A0A1B0GVI7 797 aa4.29□□□□□ -1.72
VPS35P1-201ENST00000563400 ARGFXA6NJG6 315 aa4.29□□□□□ -1.72
VPS35P1-201ENST00000563400 F5H768 121 aa4.29□□□□□ -1.72
VPS35P1-201ENST00000563400 ACOT8O14734 319 aa4.29□□□□□ -1.72
VPS35P1-201ENST00000563400 BUB3O43684 328 aa4.29□□□□□ -1.72
VPS35P1-201ENST00000563400 RAMP1O60894 148 aa4.29□□□□□ -1.72
VPS35P1-201ENST00000563400 ALOX12BO75342 701 aa4.29□□□□□ -1.72
VPS35P1-201ENST00000563400 EEDO75530 441 aaKnown RBP4.29□□□□□ -1.72
VPS35P1-201ENST00000563400 ATP6V1G2O95670 118 aa4.29□□□□□ -1.72
VPS35P1-201ENST00000563400 SERPINA2P20848 420 aa4.29□□□□□ -1.72
VPS35P1-201ENST00000563400 ALDH3B2P48448 385 aa4.29□□□□□ -1.72
VPS35P1-201ENST00000563400 PFN3P60673 137 aa4.29□□□□□ -1.72
VPS35P1-201ENST00000563400 STX4Q12846 297 aa4.29□□□□□ -1.72
VPS35P1-201ENST00000563400 TRAF2Q12933 501 aa4.29□□□□□ -1.72
VPS35P1-201ENST00000563400 MLLT11Q13015 90 aaPredicted RBP4.29□□□□□ -1.72
VPS35P1-201ENST00000563400 FHL2Q14192 279 aa4.29□□□□□ -1.72
VPS35P1-201ENST00000563400 FLOT2Q14254 428 aa4.29□□□□□ -1.72
VPS35P1-201ENST00000563400 POU6F1Q14863 301 aa4.29□□□□□ -1.72
VPS35P1-201ENST00000563400 OR10J3Q5JRS4 329 aa4.29□□□□□ -1.72
VPS35P1-201ENST00000563400 DCST2Q5T1A1 773 aa4.29□□□□□ -1.72
VPS35P1-201ENST00000563400 GPRC6AQ5T6X5 926 aa4.29□□□□□ -1.72
VPS35P1-201ENST00000563400 TRIM40Q6P9F5 258 aa4.29□□□□□ -1.72
VPS35P1-201ENST00000563400 Q6ZT83 130 aa4.29□□□□□ -1.72
VPS35P1-201ENST00000563400 C3orf62Q6ZUJ4 267 aa4.29□□□□□ -1.72
VPS35P1-201ENST00000563400 TRAPPC5Q8IUR0 188 aa4.29□□□□□ -1.72
VPS35P1-201ENST00000563400 VKORC1L1Q8N0U8 176 aa4.29□□□□□ -1.72
VPS35P1-201ENST00000563400 ZNF441Q8N8Z8 693 aa4.29□□□□□ -1.72
VPS35P1-201ENST00000563400 HSD17B11Q8NBQ5 300 aa4.29□□□□□ -1.72
VPS35P1-201ENST00000563400 OR9Q2Q8NGE9 314 aa4.29□□□□□ -1.72
VPS35P1-201ENST00000563400 DYNC2LI1Q8TCX1 351 aa4.29□□□□□ -1.72
VPS35P1-201ENST00000563400 MAPK15Q8TD08 544 aa4.29□□□□□ -1.72
VPS35P1-201ENST00000563400 MCOLN3Q8TDD5 553 aa4.29□□□□□ -1.72
VPS35P1-201ENST00000563400 SKA2Q8WVK7 121 aaPredicted RBP4.29□□□□□ -1.72
VPS35P1-201ENST00000563400 PRAP1Q96NZ9 151 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms