RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 C14orf119Q9NWQ9 140 aa6.14□□□□□ -1.43
HERPUD1-206ENST00000563343 GRHPRQ9UBQ7 328 aa6.14□□□□□ -1.43
HERPUD1-206ENST00000563343 ZNF391Q9UJN7 358 aa6.14□□□□□ -1.43
HERPUD1-206ENST00000563343 PITPNC1Q9UKF7 332 aa6.14□□□□□ -1.43
HERPUD1-206ENST00000563343 CORO2BQ9UQ03 480 aa6.14□□□□□ -1.43
HERPUD1-206ENST00000563343 IGLV1-36A0A0B4J1U3 117 aa6.13□□□□□ -1.43
HERPUD1-206ENST00000563343 HTR3EA5X5Y0 456 aa6.13□□□□□ -1.43
HERPUD1-206ENST00000563343 GGT3PA6NGU5 568 aa6.13□□□□□ -1.43
HERPUD1-206ENST00000563343 BHLHE40O14503 412 aa6.13□□□□□ -1.43
HERPUD1-206ENST00000563343 CDC42EP2O14613 210 aa6.13□□□□□ -1.43
HERPUD1-206ENST00000563343 UBDO15205 165 aa6.13□□□□□ -1.43
HERPUD1-206ENST00000563343 SNNO75324 88 aaPredicted RBP6.13□□□□□ -1.43
HERPUD1-206ENST00000563343 ACAA1P09110 424 aaPredicted RBP6.13□□□□□ -1.43
HERPUD1-206ENST00000563343 KITP10721 976 aa6.13□□□□□ -1.43
HERPUD1-206ENST00000563343 NDUFB7P17568 137 aa6.13□□□□□ -1.43
HERPUD1-206ENST00000563343 COX7A1P24310 79 aa6.13□□□□□ -1.43
HERPUD1-206ENST00000563343 OTX1P32242 354 aaPredicted RBP6.13□□□□□ -1.43
HERPUD1-206ENST00000563343 GRK5P34947 590 aa6.13□□□□□ -1.43
HERPUD1-206ENST00000563343 GGT2P36268 569 aa6.13□□□□□ -1.43
HERPUD1-206ENST00000563343 MYCNOSP40205 109 aa6.13□□□□□ -1.43
HERPUD1-206ENST00000563343 MDH1P40925 334 aaKnown RBP6.13□□□□□ -1.43
HERPUD1-206ENST00000563343 CEBPDP49716 269 aaPredicted RBP6.13□□□□□ -1.43
HERPUD1-206ENST00000563343 LUMP51884 338 aaPredicted RBP6.13□□□□□ -1.43
HERPUD1-206ENST00000563343 SLC25A1P53007 311 aa6.13□□□□□ -1.43
HERPUD1-206ENST00000563343 PRKCDQ05655 676 aa6.13□□□□□ -1.43
HERPUD1-206ENST00000563343 TNP2Q05952 138 aa6.13□□□□□ -1.43
HERPUD1-206ENST00000563343 KRR1Q13601 381 aaKnown RBP6.13□□□□□ -1.43
HERPUD1-206ENST00000563343 ANKDD1AQ495B1 522 aa6.13□□□□□ -1.43
HERPUD1-206ENST00000563343 C8orf86Q6ZUL3 223 aa6.13□□□□□ -1.43
HERPUD1-206ENST00000563343 CCDC80Q76M96 950 aa6.13□□□□□ -1.43
HERPUD1-206ENST00000563343 PATL1Q86TB9 770 aaKnown RBP6.13□□□□□ -1.43
HERPUD1-206ENST00000563343 OAFQ86UD1 273 aa6.13□□□□□ -1.43
HERPUD1-206ENST00000563343 EGFL6Q8IUX8 553 aa6.13□□□□□ -1.43
HERPUD1-206ENST00000563343 LINC00346Q8IVM7 164 aa6.13□□□□□ -1.43
HERPUD1-206ENST00000563343 SVOPQ8N4V2 548 aa6.13□□□□□ -1.43
HERPUD1-206ENST00000563343 EIF1ADQ8N9N8 165 aaKnown RBP6.13□□□□□ -1.43
HERPUD1-206ENST00000563343 SLC26A10Q8NG04 563 aa6.13□□□□□ -1.43
HERPUD1-206ENST00000563343 OR51D1Q8NGF3 324 aa6.13□□□□□ -1.43
HERPUD1-206ENST00000563343 OR4X2Q8NGF9 303 aa6.13□□□□□ -1.43
HERPUD1-206ENST00000563343 OR52H1Q8NGJ2 320 aa6.13□□□□□ -1.43
HERPUD1-206ENST00000563343 RBMXL1Q96E39 390 aaKnown RBP6.13□□□□□ -1.43
HERPUD1-206ENST00000563343 SPDL1Q96EA4 605 aa6.13□□□□□ -1.43
HERPUD1-206ENST00000563343 MALSU1Q96EH3 234 aa6.13□□□□□ -1.43
HERPUD1-206ENST00000563343 MED30Q96HR3 178 aa6.13□□□□□ -1.43
HERPUD1-206ENST00000563343 ZNF570Q96NI8 536 aa6.13□□□□□ -1.43
HERPUD1-206ENST00000563343 ATF6BQ99941 703 aa6.13□□□□□ -1.43
HERPUD1-206ENST00000563343 ZNF649Q9BS31 505 aa6.13□□□□□ -1.43
HERPUD1-206ENST00000563343 NUAK2Q9H093 628 aa6.13□□□□□ -1.43
HERPUD1-206ENST00000563343 MYLK2Q9H1R3 596 aa6.13□□□□□ -1.43
HERPUD1-206ENST00000563343 RERGLQ9H628 205 aa6.13□□□□□ -1.43
HERPUD1-206ENST00000563343 HEXA-AS1Q9H8Q6 139 aa6.13□□□□□ -1.43
HERPUD1-206ENST00000563343 NMNAT1Q9HAN9 279 aaPredicted RBP6.13□□□□□ -1.43
HERPUD1-206ENST00000563343 C19orf12Q9NSK7 152 aa6.13□□□□□ -1.43
HERPUD1-206ENST00000563343 SCOCQ9UIL1 159 aa6.13□□□□□ -1.43
HERPUD1-206ENST00000563343 ZNF222Q9UK12 451 aa6.13□□□□□ -1.43
HERPUD1-206ENST00000563343 A4GNTQ9UNA3 340 aa6.13□□□□□ -1.43
HERPUD1-206ENST00000563343 SH3GLB1Q9Y371 365 aa6.13□□□□□ -1.43
HERPUD1-206ENST00000563343 TBL2Q9Y4P3 447 aaKnown RBP6.13□□□□□ -1.43
HERPUD1-206ENST00000563343 IGKV1D-17A0A075B6S4 117 aa6.12□□□□□ -1.43
HERPUD1-206ENST00000563343 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.12□□□□□ -1.43
HERPUD1-206ENST00000563343 EVPLLA8MZ36 301 aa6.12□□□□□ -1.43
HERPUD1-206ENST00000563343 M0R135 149 aa6.12□□□□□ -1.43
HERPUD1-206ENST00000563343 XKRYO14609 159 aa6.12□□□□□ -1.43
HERPUD1-206ENST00000563343 CDIPTO14735 213 aa6.12□□□□□ -1.43
HERPUD1-206ENST00000563343 AMY1AP04745 511 aa6.12□□□□□ -1.43
HERPUD1-206ENST00000563343 AMY2AP04746 511 aa6.12□□□□□ -1.43
HERPUD1-206ENST00000563343 VIMP08670 466 aaKnown RBP6.12□□□□□ -1.43
HERPUD1-206ENST00000563343 CCL3L1P16619 93 aa6.12□□□□□ -1.43
HERPUD1-206ENST00000563343 NAA10P41227 235 aaPredicted RBP6.12□□□□□ -1.43
HERPUD1-206ENST00000563343 CDKN2AP42771 156 aaKnown RBP6.12□□□□□ -1.43
HERPUD1-206ENST00000563343 SLC9A3P48764 834 aa6.12□□□□□ -1.43
HERPUD1-206ENST00000563343 GZMMP51124 257 aa6.12□□□□□ -1.43
HERPUD1-206ENST00000563343 DLX6P56179 175 aa6.12□□□□□ -1.43
HERPUD1-206ENST00000563343 LGALS4P56470 323 aa6.12□□□□□ -1.43
HERPUD1-206ENST00000563343 RPL23AP62750 156 aaKnown RBP6.12□□□□□ -1.43
HERPUD1-206ENST00000563343 SPIBQ01892 262 aa6.12□□□□□ -1.43
HERPUD1-206ENST00000563343 MZT1Q08AG7 82 aa6.12□□□□□ -1.43
HERPUD1-206ENST00000563343 NFYCQ13952 458 aa6.12□□□□□ -1.43
HERPUD1-206ENST00000563343 SSX2Q16385 188 aa6.12□□□□□ -1.43
HERPUD1-206ENST00000563343 RFX4Q33E94 735 aa6.12□□□□□ -1.43
HERPUD1-206ENST00000563343 KHDC1LQ5JSQ8 128 aa6.12□□□□□ -1.43
HERPUD1-206ENST00000563343 ZNF626Q68DY1 528 aa6.12□□□□□ -1.43
HERPUD1-206ENST00000563343 PGM2L1Q6PCE3 622 aa6.12□□□□□ -1.43
HERPUD1-206ENST00000563343 LYPD4Q6UWN0 246 aa6.12□□□□□ -1.43
HERPUD1-206ENST00000563343 NRMQ8IXM6 262 aa6.12□□□□□ -1.43
HERPUD1-206ENST00000563343 FAM185AQ8N0U4 392 aa6.12□□□□□ -1.43
HERPUD1-206ENST00000563343 ZNRF1Q8ND25 227 aa6.12□□□□□ -1.43
HERPUD1-206ENST00000563343 OR10Z1Q8NGY1 313 aa6.12□□□□□ -1.43
HERPUD1-206ENST00000563343 FOXRED1Q96CU9 486 aaPredicted RBP6.12□□□□□ -1.43
HERPUD1-206ENST00000563343 ZNF799Q96GE5 643 aa6.12□□□□□ -1.43
HERPUD1-206ENST00000563343 C16orf45Q96MC5 204 aaPredicted RBP6.12□□□□□ -1.43
HERPUD1-206ENST00000563343 TSSK2Q96PF2 358 aa6.12□□□□□ -1.43
HERPUD1-206ENST00000563343 NRIP3Q9NQ35 241 aa6.12□□□□□ -1.43
HERPUD1-206ENST00000563343 ABCB10Q9NRK6 738 aa6.12□□□□□ -1.43
HERPUD1-206ENST00000563343 CYB5R1Q9UHQ9 305 aa6.12□□□□□ -1.43
HERPUD1-206ENST00000563343 POLR1DQ9Y2S0 133 aa6.12□□□□□ -1.43
HERPUD1-206ENST00000563343 LRP12Q9Y561 859 aa6.12□□□□□ -1.43
HERPUD1-206ENST00000563343 EFCAB9A8MZ26 197 aa6.11□□□□□ -1.43
HERPUD1-206ENST00000563343 TIPRLO75663 272 aa6.11□□□□□ -1.43
HERPUD1-206ENST00000563343 GLCEO94923 617 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms