RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 MYCNOSP40205 109 aa1.25□□□□□ -2.21
CHD9-207ENST00000562806 TGM4P49221 684 aa1.25□□□□□ -2.21
CHD9-207ENST00000562806 NDUFA8P51970 172 aa1.25□□□□□ -2.21
CHD9-207ENST00000562806 PPP1CAP62136 330 aa1.25□□□□□ -2.21
CHD9-207ENST00000562806 MERTKQ12866 999 aa1.25□□□□□ -2.21
CHD9-207ENST00000562806 GCSAMLQ5JQS6 135 aa1.25□□□□□ -2.21
CHD9-207ENST00000562806 LRRC66Q68CR7 880 aa1.25□□□□□ -2.21
CHD9-207ENST00000562806 TWF2Q6IBS0 349 aaKnown RBP1.25□□□□□ -2.21
CHD9-207ENST00000562806 MORN3Q6PF18 240 aaPredicted RBP1.25□□□□□ -2.21
CHD9-207ENST00000562806 METAP1DQ6UB28 335 aaPredicted RBP1.25□□□□□ -2.21
CHD9-207ENST00000562806 LUZP2Q86TE4 346 aa1.25□□□□□ -2.21
CHD9-207ENST00000562806 CDH26Q8IXH8 852 aa1.25□□□□□ -2.21
CHD9-207ENST00000562806 VKORC1L1Q8N0U8 176 aa1.25□□□□□ -2.21
CHD9-207ENST00000562806 ZNF645Q8N7E2 425 aa1.25□□□□□ -2.21
CHD9-207ENST00000562806 RCN3Q96D15 328 aa1.25□□□□□ -2.21
CHD9-207ENST00000562806 UCK2Q9BZX2 261 aa1.25□□□□□ -2.21
CHD9-207ENST00000562806 API5Q9BZZ5 524 aaKnown RBP1.25□□□□□ -2.21
CHD9-207ENST00000562806 FAM192AQ9GZU8 254 aa1.25□□□□□ -2.21
CHD9-207ENST00000562806 ABCG5Q9H222 651 aa1.25□□□□□ -2.21
CHD9-207ENST00000562806 DUSP21Q9H596 190 aa1.25□□□□□ -2.21
CHD9-207ENST00000562806 ZNF442Q9H7R0 627 aa1.25□□□□□ -2.21
CHD9-207ENST00000562806 TRIM45Q9H8W5 580 aaPredicted RBP1.25□□□□□ -2.21
CHD9-207ENST00000562806 LINC00574Q9H8X3 128 aa1.25□□□□□ -2.21
CHD9-207ENST00000562806 INIPQ9NRY2 104 aa1.25□□□□□ -2.21
CHD9-207ENST00000562806 C20orf96Q9NUD7 363 aaPredicted RBP1.25□□□□□ -2.21
CHD9-207ENST00000562806 FARSAQ9Y285 508 aaKnown RBP1.25□□□□□ -2.21
CHD9-207ENST00000562806 M0R1X1 148 aa1.24□□□□□ -2.21
CHD9-207ENST00000562806 SLC9A3R1O14745 358 aaPredicted RBP1.24□□□□□ -2.21
CHD9-207ENST00000562806 CDH16O75309 829 aa1.24□□□□□ -2.21
CHD9-207ENST00000562806 UPK1BO75841 260 aa1.24□□□□□ -2.21
CHD9-207ENST00000562806 FSTL3O95633 263 aa1.24□□□□□ -2.21
CHD9-207ENST00000562806 TGM6O95932 706 aa1.24□□□□□ -2.21
CHD9-207ENST00000562806 ZNF35P13682 527 aa1.24□□□□□ -2.21
CHD9-207ENST00000562806 HRES1P13985 223 aa1.24□□□□□ -2.21
CHD9-207ENST00000562806 CTRB1P17538 263 aa1.24□□□□□ -2.21
CHD9-207ENST00000562806 RAB7AP51149 207 aa1.24□□□□□ -2.21
CHD9-207ENST00000562806 RAB9AP51151 201 aa1.24□□□□□ -2.21
CHD9-207ENST00000562806 RPS15P62841 145 aaKnown RBP1.24□□□□□ -2.21
CHD9-207ENST00000562806 TNFRSF9Q07011 255 aa1.24□□□□□ -2.21
CHD9-207ENST00000562806 KRTAP6-3Q3LI67 103 aa1.24□□□□□ -2.21
CHD9-207ENST00000562806 BZW1Q7L1Q6 419 aaKnown RBP1.24□□□□□ -2.21
CHD9-207ENST00000562806 DAZ4Q86SG3 579 aaKnown RBP1.24□□□□□ -2.21
CHD9-207ENST00000562806 UNC93AQ86WB7 457 aa1.24□□□□□ -2.21
CHD9-207ENST00000562806 ASZ1Q8WWH4 475 aa1.24□□□□□ -2.21
CHD9-207ENST00000562806 N4BP2L2Q92802 583 aaPredicted RBP1.24□□□□□ -2.21
CHD9-207ENST00000562806 TBL1XR1Q9BZK7 514 aa1.24□□□□□ -2.21
CHD9-207ENST00000562806 PLEKHF2Q9H8W4 249 aa1.24□□□□□ -2.21
CHD9-207ENST00000562806 FANCEQ9HB96 536 aa1.24□□□□□ -2.21
CHD9-207ENST00000562806 DAZ1Q9NQZ3 744 aaKnown RBP1.24□□□□□ -2.21
CHD9-207ENST00000562806 ZNF302Q9NR11 478 aa1.24□□□□□ -2.21
CHD9-207ENST00000562806 AGPAT4Q9NRZ5 378 aa1.24□□□□□ -2.21
CHD9-207ENST00000562806 ASF1BQ9NVP2 202 aa1.24□□□□□ -2.21
CHD9-207ENST00000562806 RWDD2AQ9UIY3 292 aa1.24□□□□□ -2.21
CHD9-207ENST00000562806 RCL1Q9Y2P8 373 aaKnown RBP1.24□□□□□ -2.21
CHD9-207ENST00000562806 SLC22A7Q9Y694 548 aa1.24□□□□□ -2.21
CHD9-207ENST00000562806 TRIP11Q15643 1979 aa1.23□□□□□ -2.21
CHD9-207ENST00000562806 A0A075B6Q4 140 aa1.23□□□□□ -2.21
CHD9-207ENST00000562806 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.23□□□□□ -2.21
CHD9-207ENST00000562806 GABRPO00591 440 aa1.23□□□□□ -2.21
CHD9-207ENST00000562806 EIF3HO15372 352 aaKnown RBP eCLIP1.23□□□□□ -2.211e-7■■■■■ 33.7
CHD9-207ENST00000562806 ERI3O43414 337 aaKnown RBP1.23□□□□□ -2.21
CHD9-207ENST00000562806 XRCC2O43543 280 aa1.23□□□□□ -2.21
CHD9-207ENST00000562806 ERCC1P07992 297 aaPredicted RBP1.23□□□□□ -2.21
CHD9-207ENST00000562806 TCP1P17987 556 aaKnown RBP1.23□□□□□ -2.21
CHD9-207ENST00000562806 RFC3P40938 356 aa1.23□□□□□ -2.21
CHD9-207ENST00000562806 NUDT2P50583 147 aa1.23□□□□□ -2.21
CHD9-207ENST00000562806 CMC4P56277 68 aaPredicted RBP1.23□□□□□ -2.21
CHD9-207ENST00000562806 OR2B8PP59922 312 aa1.23□□□□□ -2.21
CHD9-207ENST00000562806 TRMT5Q32P41 509 aaKnown RBP1.23□□□□□ -2.21
CHD9-207ENST00000562806 CCDC183Q5T5S1 534 aa1.23□□□□□ -2.21
CHD9-207ENST00000562806 CPTPQ5TA50 214 aa1.23□□□□□ -2.21
CHD9-207ENST00000562806 PRAMEF20Q5VT98 475 aa1.23□□□□□ -2.21
CHD9-207ENST00000562806 AMMECR1LQ6DCA0 310 aa1.23□□□□□ -2.21
CHD9-207ENST00000562806 SPNS3Q6ZMD2 512 aa1.23□□□□□ -2.21
CHD9-207ENST00000562806 PAGE2Q7Z2X7 111 aa1.23□□□□□ -2.21
CHD9-207ENST00000562806 APRG1Q8IVJ8 170 aa1.23□□□□□ -2.21
CHD9-207ENST00000562806 WDR31Q8NA23 367 aa1.23□□□□□ -2.21
CHD9-207ENST00000562806 ZNF420Q8TAQ5 688 aaPredicted RBP1.23□□□□□ -2.21
CHD9-207ENST00000562806 ITFG1Q8TB96 612 aa1.23□□□□□ -2.21
CHD9-207ENST00000562806 RAB1CQ92928 201 aa1.23□□□□□ -2.21
CHD9-207ENST00000562806 SMARCD1Q96GM5 515 aa1.23□□□□□ -2.21
CHD9-207ENST00000562806 C18orf15Q96N68 181 aa1.23□□□□□ -2.21
CHD9-207ENST00000562806 STACQ99469 402 aa1.23□□□□□ -2.21
CHD9-207ENST00000562806 ANKRA2Q9H9E1 313 aa1.23□□□□□ -2.21
CHD9-207ENST00000562806 MCUBQ9NWR8 336 aa1.23□□□□□ -2.21
CHD9-207ENST00000562806 NMRK1Q9NWW6 199 aa1.23□□□□□ -2.21
CHD9-207ENST00000562806 DCAF16Q9NXF7 216 aa1.23□□□□□ -2.21
CHD9-207ENST00000562806 ZNF492Q9P255 531 aa1.23□□□□□ -2.21
CHD9-207ENST00000562806 RAB22AQ9UL26 194 aa1.23□□□□□ -2.21
CHD9-207ENST00000562806 NPHP4O75161 1426 aaPredicted RBP1.23□□□□□ -2.21
CHD9-207ENST00000562806 NACADO15069 1562 aa1.22□□□□□ -2.21
CHD9-207ENST00000562806 A0A0A6YYD5 115 aa1.22□□□□□ -2.21
CHD9-207ENST00000562806 A0A1W2PRD5 423 aa1.22□□□□□ -2.21
CHD9-207ENST00000562806 CLDN34H7C241 214 aa1.22□□□□□ -2.21
CHD9-207ENST00000562806 KCNK2O95069 426 aa1.22□□□□□ -2.21
CHD9-207ENST00000562806 SNX4O95219 450 aa1.22□□□□□ -2.21
CHD9-207ENST00000562806 IGLV2-8P01709 118 aa1.22□□□□□ -2.21
CHD9-207ENST00000562806 TRBV12-3P01733 135 aa1.22□□□□□ -2.21
CHD9-207ENST00000562806 CD28P10747 220 aa1.22□□□□□ -2.21
CHD9-207ENST00000562806 GGT2P36268 569 aa1.22□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms