RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 ASPHD2Q6ICH7 369 aa13.74□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 CYP2R1Q6VVX0 501 aa13.74□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 DPY19L4Q7Z388 723 aa13.74□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 DEFB107AQ8IZN7 70 aa13.74□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 SEMA6AQ9H2E6 1030 aa13.74□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 MMP27Q9H306 513 aa13.74□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 ARL8BQ9NVJ2 186 aa13.74□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 ARMC1Q9NVT9 282 aa13.74□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 VNN3Q9NY84 501 aa13.74□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 ONECUT1Q9UBC0 465 aa13.74□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 M0QZ24 198 aa13.73□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 ACOT8O14734 319 aa13.73□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 HSD11B1P28845 292 aa13.73□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 SLC15A1P46059 708 aa13.73□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 DLX1P56177 255 aa13.73□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 PRB3Q04118 309 aaPredicted RBP13.73□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 FAM57BQ71RH2 274 aa13.73□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 OR2T33Q8NG76 320 aa13.73□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 RNF133Q8WVZ7 376 aa13.73□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 AMELYQ99218 206 aa13.73□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 RBM4BQ9BQ04 359 aaKnown RBP13.73□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 TLNRD1Q9H1K6 362 aa13.73□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 DNAJC27Q9NZQ0 273 aa13.73□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 TAGLN3Q9UI15 199 aa13.73□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 BAIAP2Q9UQB8 552 aa13.73□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 RHBDD3Q9Y3P4 386 aa13.73□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 NOTCH1P46531 2555 aa13.73□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 TCRBV5S2A0A599 114 aa13.72□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 CDIPTO14735 213 aa13.72□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 TIMM23O14925 209 aa13.72□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 TIPRLO75663 272 aa13.72□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 SELLP14151 372 aa13.72□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 GSK3AP49840 483 aa13.72□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 ZNF121P58317 390 aaPredicted RBP13.72□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 IKZF1Q13422 519 aa13.72□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 GFOD2Q3B7J2 385 aa13.72□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 SPATS1Q496A3 300 aa13.72□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 STUMQ69YW2 141 aa13.72□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 METAP1DQ6UB28 335 aaPredicted RBP13.72□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 Q6ZSV7 163 aa13.72□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 SLC36A1Q7Z2H8 476 aa13.72□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 Q8N7P7 452 aa13.72□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 ZSCAN4Q8NAM6 433 aaPredicted RBP13.72□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 OR6N2Q8NGY6 317 aa13.72□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 C12orf43Q96C57 262 aaKnown RBP13.72□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 ITPKCQ96DU7 683 aa13.72□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 ABHD6Q9BV23 337 aa13.72□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 DPAGT1Q9H3H5 408 aa13.72□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 TOR3AQ9H497 397 aa13.72□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 MED20Q9H944 212 aa13.72□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 SIRT7Q9NRC8 400 aa13.72□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 ZNRD1Q9P1U0 126 aa13.72□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 PRPF19Q9UMS4 504 aaKnown RBP13.72□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 U3KQV3 271 aa13.72□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 FAM183AA6NL82 134 aa13.71□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 RNASEK-C17orf49H0YIS7 233 aa13.71□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 TGM4P49221 684 aa13.71□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 BLVRAP53004 296 aa13.71□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 C16orf89Q6UX73 402 aa13.71□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 ERI1Q8IV48 349 aaKnown RBP13.71□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 OR5T2Q8NGG2 359 aa13.71□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 INTS14Q96SY0 518 aa13.71□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 DCTN5Q9BTE1 182 aa13.71□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 PAPOLGQ9BWT3 736 aaKnown RBP13.71□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 DGCR6LQ9BY27 220 aa13.71□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 WDR13Q9H1Z4 485 aa13.71□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 BRD7Q9NPI1 651 aa13.71□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 CMC2Q9NRP2 79 aa13.71□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 ACTR3BQ9P1U1 418 aa13.71□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 DNAJB11Q9UBS4 358 aa13.71□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 FAM96BQ9Y3D0 163 aa13.71□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 RIIAD1A6NNX1 92 aa13.7□□□□□ -0.22
VPS9D1-AS1-201ENST00000562298 NDUFB3O43676 98 aa13.7□□□□□ -0.22
VPS9D1-AS1-201ENST00000562298 IFNGP01579 166 aa13.7□□□□□ -0.22
VPS9D1-AS1-201ENST00000562298 TFF1P04155 84 aa13.7□□□□□ -0.22
VPS9D1-AS1-201ENST00000562298 FBP1P09467 338 aa13.7□□□□□ -0.22
VPS9D1-AS1-201ENST00000562298 ZNF3P17036 446 aa13.7□□□□□ -0.22
VPS9D1-AS1-201ENST00000562298 CFL1P23528 166 aaKnown RBP13.7□□□□□ -0.22
VPS9D1-AS1-201ENST00000562298 ACKR3P25106 362 aa13.7□□□□□ -0.22
VPS9D1-AS1-201ENST00000562298 GNALP38405 381 aa13.7□□□□□ -0.22
VPS9D1-AS1-201ENST00000562298 OPRL1P41146 370 aa13.7□□□□□ -0.22
VPS9D1-AS1-201ENST00000562298 NAA10P41227 235 aaPredicted RBP13.7□□□□□ -0.22
VPS9D1-AS1-201ENST00000562298 GMFBP60983 142 aa13.7□□□□□ -0.22
VPS9D1-AS1-201ENST00000562298 KLRD1Q13241 179 aa13.7□□□□□ -0.22
VPS9D1-AS1-201ENST00000562298 MICAQ29983 383 aa13.7□□□□□ -0.22
VPS9D1-AS1-201ENST00000562298 ATPAF1Q5TC12 328 aaPredicted RBP13.7□□□□□ -0.22
VPS9D1-AS1-201ENST00000562298 GDPGP1Q6ZNW5 385 aa13.7□□□□□ -0.22
VPS9D1-AS1-201ENST00000562298 CPLX4Q7Z7G2 160 aa13.7□□□□□ -0.22
VPS9D1-AS1-201ENST00000562298 GALNT4Q8N4A0 578 aa13.7□□□□□ -0.22
VPS9D1-AS1-201ENST00000562298 IQCF1Q8N6M8 205 aa13.7□□□□□ -0.22
VPS9D1-AS1-201ENST00000562298 OR52H1Q8NGJ2 320 aa13.7□□□□□ -0.22
VPS9D1-AS1-201ENST00000562298 TNFRSF14Q92956 283 aa13.7□□□□□ -0.22
VPS9D1-AS1-201ENST00000562298 DMRTB1Q96MA1 342 aa13.7□□□□□ -0.22
VPS9D1-AS1-201ENST00000562298 NIPSNAP1Q9BPW8 284 aa13.7□□□□□ -0.22
VPS9D1-AS1-201ENST00000562298 FGF23Q9GZV9 251 aaPredicted RBP13.7□□□□□ -0.22
VPS9D1-AS1-201ENST00000562298 OR10A2Q9H208 303 aa13.7□□□□□ -0.22
VPS9D1-AS1-201ENST00000562298 SP140LQ9H930 580 aa13.7□□□□□ -0.22
VPS9D1-AS1-201ENST00000562298 NDE1Q9NXR1 346 aa13.7□□□□□ -0.22
VPS9D1-AS1-201ENST00000562298 VPREB3Q9UKI3 123 aa13.7□□□□□ -0.22
VPS9D1-AS1-201ENST00000562298 SAMHD1Q9Y3Z3 626 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms