RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 TLNRD1Q9H1K6 362 aa11.35□□□□□ -0.59
CDH1-204ENST00000562118 DUSP21Q9H596 190 aa11.35□□□□□ -0.59
CDH1-204ENST00000562118 GCM1Q9NP62 436 aa11.35□□□□□ -0.59
CDH1-204ENST00000562118 ABCB9Q9NP78 766 aa11.35□□□□□ -0.59
CDH1-204ENST00000562118 ZNF275Q9NSD4 429 aaPredicted RBP11.35□□□□□ -0.59
CDH1-204ENST00000562118 FRRS1LQ9P0K9 344 aa11.35□□□□□ -0.59
CDH1-204ENST00000562118 GNG8Q9UK08 70 aa11.35□□□□□ -0.59
CDH1-204ENST00000562118 SLC22A13Q9Y226 551 aa11.35□□□□□ -0.59
CDH1-204ENST00000562118 EXOSC1Q9Y3B2 195 aaKnown RBP11.35□□□□□ -0.59
CDH1-204ENST00000562118 TEP1Q99973 2627 aaKnown RBP11.34□□□□□ -0.59
CDH1-204ENST00000562118 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.34□□□□□ -0.59
CDH1-204ENST00000562118 LOC100289279A0A1B0GTE1 492 aa11.34□□□□□ -0.59
CDH1-204ENST00000562118 IFNL4K9M1U5 179 aa11.34□□□□□ -0.59
CDH1-204ENST00000562118 DENRO43583 198 aaKnown RBP11.34□□□□□ -0.59
CDH1-204ENST00000562118 UBCP0CG48 685 aaKnown RBP11.34□□□□□ -0.59
CDH1-204ENST00000562118 TNFRSF1AP19438 455 aa11.34□□□□□ -0.59
CDH1-204ENST00000562118 CA6P23280 308 aa11.34□□□□□ -0.59
CDH1-204ENST00000562118 TNFSF4P23510 183 aa11.34□□□□□ -0.59
CDH1-204ENST00000562118 KRTAP1-1Q07627 177 aa11.34□□□□□ -0.59
CDH1-204ENST00000562118 ST3GAL4Q11206 333 aa11.34□□□□□ -0.59
CDH1-204ENST00000562118 TSTQ16762 297 aaKnown RBP11.34□□□□□ -0.59
CDH1-204ENST00000562118 CCDC58Q4VC31 144 aa11.34□□□□□ -0.59
CDH1-204ENST00000562118 DOK3Q7L591 496 aa11.34□□□□□ -0.59
CDH1-204ENST00000562118 ZNF540Q8NDQ6 660 aa11.34□□□□□ -0.59
CDH1-204ENST00000562118 ITLN1Q8WWA0 313 aa11.34□□□□□ -0.59
CDH1-204ENST00000562118 HPSE2Q8WWQ2 592 aa11.34□□□□□ -0.59
CDH1-204ENST00000562118 C10orf35Q96D05 121 aa11.34□□□□□ -0.59
CDH1-204ENST00000562118 C1orf159Q96HA4 380 aa11.34□□□□□ -0.59
CDH1-204ENST00000562118 PIMREGQ9BSJ6 248 aa11.34□□□□□ -0.59
CDH1-204ENST00000562118 ADAT1Q9BUB4 502 aaKnown RBP11.34□□□□□ -0.59
CDH1-204ENST00000562118 CDCA4Q9BXL8 241 aa11.34□□□□□ -0.59
CDH1-204ENST00000562118 REG4Q9BYZ8 158 aa11.34□□□□□ -0.59
CDH1-204ENST00000562118 BPESC1Q9GZL8 116 aa11.34□□□□□ -0.59
CDH1-204ENST00000562118 DECR2Q9NUI1 292 aa11.34□□□□□ -0.59
CDH1-204ENST00000562118 PAK1IP1Q9NWT1 392 aaPredicted RBP11.34□□□□□ -0.59
CDH1-204ENST00000562118 RHBDD3Q9Y3P4 386 aa11.34□□□□□ -0.59
CDH1-204ENST00000562118 MPC1Q9Y5U8 109 aa11.34□□□□□ -0.59
CDH1-204ENST00000562118 CACNG2Q9Y698 323 aa11.34□□□□□ -0.59
CDH1-204ENST00000562118 SVEP1Q4LDE5 3571 aa11.34□□□□□ -0.59
CDH1-204ENST00000562118 ZNF816-ZNF321PA0A0X1KG74 233 aa11.33□□□□□ -0.6
CDH1-204ENST00000562118 E9PI62 339 aa11.33□□□□□ -0.6
CDH1-204ENST00000562118 F5H5P2 479 aa11.33□□□□□ -0.6
CDH1-204ENST00000562118 LYNX1G3V0Z9 82 aa11.33□□□□□ -0.6
CDH1-204ENST00000562118 MTRF1O75570 445 aaKnown RBP11.33□□□□□ -0.6
CDH1-204ENST00000562118 RPP14O95059 124 aaKnown RBP11.33□□□□□ -0.6
CDH1-204ENST00000562118 HLA-DPB1P04440 258 aa11.33□□□□□ -0.6
CDH1-204ENST00000562118 LYNX1P0DP58 116 aa11.33□□□□□ -0.6
CDH1-204ENST00000562118 MAP2K3P46734 347 aa11.33□□□□□ -0.6
CDH1-204ENST00000562118 SRP9P49458 86 aaKnown RBP11.33□□□□□ -0.6
CDH1-204ENST00000562118 ALKBH1Q13686 389 aaKnown RBP11.33□□□□□ -0.6
CDH1-204ENST00000562118 DOC2BQ14184 412 aa11.33□□□□□ -0.6
CDH1-204ENST00000562118 IRF3Q14653 427 aa11.33□□□□□ -0.6
CDH1-204ENST00000562118 WDR86Q86TI4 376 aa11.33□□□□□ -0.6
CDH1-204ENST00000562118 FTMTQ8N4E7 242 aa11.33□□□□□ -0.6
CDH1-204ENST00000562118 SEMA6DQ8NFY4 1073 aa11.33□□□□□ -0.6
CDH1-204ENST00000562118 OR5P3Q8WZ94 311 aa11.33□□□□□ -0.6
CDH1-204ENST00000562118 C18orf12Q96KH6 178 aa11.33□□□□□ -0.6
CDH1-204ENST00000562118 CLEC2DQ9UHP7 191 aa11.33□□□□□ -0.6
CDH1-204ENST00000562118 PCDHGB5Q9Y5G0 923 aa11.33□□□□□ -0.6
CDH1-204ENST00000562118 N6AMT1Q9Y5N5 214 aa11.33□□□□□ -0.6
CDH1-204ENST00000562118 MTORP42345 2549 aa11.32□□□□□ -0.6
CDH1-204ENST00000562118 ANKRD30BLA7E2S9 258 aa11.32□□□□□ -0.6
CDH1-204ENST00000562118 H7C1Q1 480 aa11.32□□□□□ -0.6
CDH1-204ENST00000562118 J3QLW9 94 aa11.32□□□□□ -0.6
CDH1-204ENST00000562118 CDK1P06493 297 aa11.32□□□□□ -0.6
CDH1-204ENST00000562118 RPSAP08865 295 aaKnown RBP11.32□□□□□ -0.6
CDH1-204ENST00000562118 HTR1AP08908 422 aa11.32□□□□□ -0.6
CDH1-204ENST00000562118 ZNF19P17023 458 aa11.32□□□□□ -0.6
CDH1-204ENST00000562118 CRHBPP24387 322 aa11.32□□□□□ -0.6
CDH1-204ENST00000562118 C21orf33P30042 268 aaPredicted RBP11.32□□□□□ -0.6
CDH1-204ENST00000562118 CFHR2P36980 270 aa11.32□□□□□ -0.6
CDH1-204ENST00000562118 PSMB10P40306 273 aa11.32□□□□□ -0.6
CDH1-204ENST00000562118 PMELP40967 661 aa11.32□□□□□ -0.6
CDH1-204ENST00000562118 OR8G1Q15617 311 aa11.32□□□□□ -0.6
CDH1-204ENST00000562118 TMEM244Q5VVB8 128 aa11.32□□□□□ -0.6
CDH1-204ENST00000562118 C11orf53Q8IXP5 236 aa11.32□□□□□ -0.6
CDH1-204ENST00000562118 BPIFB6Q8NFQ5 453 aa11.32□□□□□ -0.6
CDH1-204ENST00000562118 PPP1R3EQ9H7J1 279 aa11.32□□□□□ -0.6
CDH1-204ENST00000562118 TMEM106BQ9NUM4 274 aa11.32□□□□□ -0.6
CDH1-204ENST00000562118 LSM2Q9Y333 95 aaKnown RBP11.32□□□□□ -0.6
CDH1-204ENST00000562118 TLN2Q9Y4G6 2542 aa11.32□□□□□ -0.6
CDH1-204ENST00000562118 IGHV4-61A0A0C4DH41 118 aa11.31□□□□□ -0.6
CDH1-204ENST00000562118 LOC107986453A0A1B0GWG9 222 aa11.31□□□□□ -0.6
CDH1-204ENST00000562118 TMEM212A6NML5 194 aa11.31□□□□□ -0.6
CDH1-204ENST00000562118 RNF223E7ERA6 249 aa11.31□□□□□ -0.6
CDH1-204ENST00000562118 TMEM178BH3BS89 294 aa11.31□□□□□ -0.6
CDH1-204ENST00000562118 P2RY10O00398 339 aa11.31□□□□□ -0.6
CDH1-204ENST00000562118 OGG1O15527 345 aa11.31□□□□□ -0.6
CDH1-204ENST00000562118 ZFPL1O95159 310 aa11.31□□□□□ -0.6
CDH1-204ENST00000562118 LALBAP00709 142 aa11.31□□□□□ -0.6
CDH1-204ENST00000562118 IGHV2-70P01814 119 aa11.31□□□□□ -0.6
CDH1-204ENST00000562118 CD1AP06126 327 aa11.31□□□□□ -0.6
CDH1-204ENST00000562118 CD99P14209 185 aa11.31□□□□□ -0.6
CDH1-204ENST00000562118 ZNF12P17014 697 aa11.31□□□□□ -0.6
CDH1-204ENST00000562118 MYL12AP19105 171 aa11.31□□□□□ -0.6
CDH1-204ENST00000562118 SLC3A1Q07837 685 aa11.31□□□□□ -0.6
CDH1-204ENST00000562118 MZT1Q08AG7 82 aa11.31□□□□□ -0.6
CDH1-204ENST00000562118 ACSM1Q08AH1 577 aa11.31□□□□□ -0.6
CDH1-204ENST00000562118 RIPPLY1Q0D2K3 151 aa11.31□□□□□ -0.6
CDH1-204ENST00000562118 PRDX4Q13162 271 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms