RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 SPTSSAQ969W0 71 aa9.51□□□□□ -0.89
NSMCE1-202ENST00000561960 DUS3LQ96G46 650 aaKnown RBP9.51□□□□□ -0.89
NSMCE1-202ENST00000561960 AJUBAQ96IF1 538 aa9.51□□□□□ -0.89
NSMCE1-202ENST00000561960 GAFA1Q96PS6 74 aa9.51□□□□□ -0.89
NSMCE1-202ENST00000561960 CITED2Q99967 270 aaPredicted RBP9.51□□□□□ -0.89
NSMCE1-202ENST00000561960 DCTN5Q9BTE1 182 aa9.51□□□□□ -0.89
NSMCE1-202ENST00000561960 NECAP2Q9NVZ3 263 aa9.51□□□□□ -0.89
NSMCE1-202ENST00000561960 GID8Q9NWU2 228 aa9.51□□□□□ -0.89
NSMCE1-202ENST00000561960 MRPL15Q9P015 296 aaKnown RBP9.51□□□□□ -0.89
NSMCE1-202ENST00000561960 NDUFAF4Q9P032 175 aa9.51□□□□□ -0.89
NSMCE1-202ENST00000561960 CAB39Q9Y376 341 aaPredicted RBP9.51□□□□□ -0.89
NSMCE1-202ENST00000561960 RHBDD3Q9Y3P4 386 aa9.51□□□□□ -0.89
NSMCE1-202ENST00000561960 HTR3EA5X5Y0 456 aa9.5□□□□□ -0.89
NSMCE1-202ENST00000561960 ANKRD30BLA7E2S9 258 aa9.5□□□□□ -0.89
NSMCE1-202ENST00000561960 NDUFA2O43678 99 aa9.5□□□□□ -0.89
NSMCE1-202ENST00000561960 FBXO24O75426 580 aa9.5□□□□□ -0.89
NSMCE1-202ENST00000561960 CLUP10909 449 aa9.5□□□□□ -0.89
NSMCE1-202ENST00000561960 ZNF823P16415 610 aa9.5□□□□□ -0.89
NSMCE1-202ENST00000561960 GABRA2P47869 451 aa9.5□□□□□ -0.89
NSMCE1-202ENST00000561960 SPIBQ01892 262 aa9.5□□□□□ -0.89
NSMCE1-202ENST00000561960 GUCA2AQ02747 115 aa9.5□□□□□ -0.89
NSMCE1-202ENST00000561960 SLC36A3Q495N2 470 aa9.5□□□□□ -0.89
NSMCE1-202ENST00000561960 LRRC10Q5BKY1 277 aa9.5□□□□□ -0.89
NSMCE1-202ENST00000561960 VAX1Q5SQQ9 334 aa9.5□□□□□ -0.89
NSMCE1-202ENST00000561960 STUMQ69YW2 141 aa9.5□□□□□ -0.89
NSMCE1-202ENST00000561960 PGM2L1Q6PCE3 622 aa9.5□□□□□ -0.89
NSMCE1-202ENST00000561960 Q6ZS46 218 aa9.5□□□□□ -0.89
NSMCE1-202ENST00000561960 SLC16A9Q7RTY1 509 aa9.5□□□□□ -0.89
NSMCE1-202ENST00000561960 MKXQ8IYA7 352 aa9.5□□□□□ -0.89
NSMCE1-202ENST00000561960 GALNT4Q8N4A0 578 aa9.5□□□□□ -0.89
NSMCE1-202ENST00000561960 RNF148Q8N7C7 305 aa9.5□□□□□ -0.89
NSMCE1-202ENST00000561960 ZNF511Q8NB15 262 aa9.5□□□□□ -0.89
NSMCE1-202ENST00000561960 OR5R1Q8NH85 324 aa9.5□□□□□ -0.89
NSMCE1-202ENST00000561960 CFHR4Q92496 578 aa9.5□□□□□ -0.89
NSMCE1-202ENST00000561960 SLAMF6Q96DU3 332 aa9.5□□□□□ -0.89
NSMCE1-202ENST00000561960 REEP6Q96HR9 211 aa9.5□□□□□ -0.89
NSMCE1-202ENST00000561960 PAPOLGQ9BWT3 736 aaKnown RBP9.5□□□□□ -0.89
NSMCE1-202ENST00000561960 FGF23Q9GZV9 251 aaPredicted RBP9.5□□□□□ -0.89
NSMCE1-202ENST00000561960 TRIM36Q9NQ86 728 aa9.5□□□□□ -0.89
NSMCE1-202ENST00000561960 FGFR1OP2Q9NVK5 253 aa9.5□□□□□ -0.89
NSMCE1-202ENST00000561960 C14orf119Q9NWQ9 140 aa9.5□□□□□ -0.89
NSMCE1-202ENST00000561960 KAAG1Q9UBP8 84 aa9.5□□□□□ -0.89
NSMCE1-202ENST00000561960 SLC25A10Q9UBX3 287 aaPredicted RBP9.5□□□□□ -0.89
NSMCE1-202ENST00000561960 FAM32AQ9Y421 112 aaKnown RBP9.5□□□□□ -0.89
NSMCE1-202ENST00000561960 A0A1W2PRQ8 180 aa9.49□□□□□ -0.89
NSMCE1-202ENST00000561960 BBIP1A8MTZ0 92 aa9.49□□□□□ -0.89
NSMCE1-202ENST00000561960 ADARB2-AS1A8MUL3 147 aa9.49□□□□□ -0.89
NSMCE1-202ENST00000561960 H0YAE9 185 aa9.49□□□□□ -0.89
NSMCE1-202ENST00000561960 K7EIL1 84 aa9.49□□□□□ -0.89
NSMCE1-202ENST00000561960 SLC6A6P31641 620 aa9.49□□□□□ -0.89
NSMCE1-202ENST00000561960 CX3CR1P49238 355 aa9.49□□□□□ -0.89
NSMCE1-202ENST00000561960 CEBPDP49716 269 aaPredicted RBP9.49□□□□□ -0.89
NSMCE1-202ENST00000561960 FAM3AP98173 230 aa9.49□□□□□ -0.89
NSMCE1-202ENST00000561960 DGCR6Q14129 220 aa9.49□□□□□ -0.89
NSMCE1-202ENST00000561960 TIGD6Q17RP2 521 aa9.49□□□□□ -0.89
NSMCE1-202ENST00000561960 LRRC75BQ2VPJ9 315 aa9.49□□□□□ -0.89
NSMCE1-202ENST00000561960 KLHL12Q53G59 568 aa9.49□□□□□ -0.89
NSMCE1-202ENST00000561960 DEFB121Q5J5C9 76 aa9.49□□□□□ -0.89
NSMCE1-202ENST00000561960 FAM57BQ71RH2 274 aa9.49□□□□□ -0.89
NSMCE1-202ENST00000561960 SLC36A1Q7Z2H8 476 aa9.49□□□□□ -0.89
NSMCE1-202ENST00000561960 REC114Q7Z4M0 266 aa9.49□□□□□ -0.89
NSMCE1-202ENST00000561960 LHFPL4Q7Z7J7 247 aa9.49□□□□□ -0.89
NSMCE1-202ENST00000561960 ZBTB46Q86UZ6 589 aa9.49□□□□□ -0.89
NSMCE1-202ENST00000561960 ZDHHC21Q8IVQ6 265 aa9.49□□□□□ -0.89
NSMCE1-202ENST00000561960 DYNAPQ8N1N2 210 aa9.49□□□□□ -0.89
NSMCE1-202ENST00000561960 ZNRF1Q8ND25 227 aa9.49□□□□□ -0.89
NSMCE1-202ENST00000561960 BEND2Q8NDZ0 799 aa9.49□□□□□ -0.89
NSMCE1-202ENST00000561960 TMEM185AQ8NFB2 350 aa9.49□□□□□ -0.89
NSMCE1-202ENST00000561960 KCTD14Q9BQ13 255 aaPredicted RBP9.49□□□□□ -0.89
NSMCE1-202ENST00000561960 SLC22A4Q9H015 551 aa9.49□□□□□ -0.89
NSMCE1-202ENST00000561960 ZNF702PQ9H963 129 aa9.49□□□□□ -0.89
NSMCE1-202ENST00000561960 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.49□□□□□ -0.89
NSMCE1-202ENST00000561960 HAO2Q9NYQ3 351 aa9.49□□□□□ -0.89
NSMCE1-202ENST00000561960 ZNF319Q9P2F9 582 aa9.49□□□□□ -0.89
NSMCE1-202ENST00000561960 COMMD3-BMI1R4GMX3 469 aa9.49□□□□□ -0.89
NSMCE1-202ENST00000561960 DSCAML1Q8TD84 2053 aa9.49□□□□□ -0.89
NSMCE1-202ENST00000561960 NKX6-3A6NJ46 265 aa9.48□□□□□ -0.89
NSMCE1-202ENST00000561960 ZNF850A8MQ14 1090 aa9.48□□□□□ -0.89
NSMCE1-202ENST00000561960 RHBDL1O75783 438 aa9.48□□□□□ -0.89
NSMCE1-202ENST00000561960 MUC1P15941 1255 aaPredicted RBP9.48□□□□□ -0.89
NSMCE1-202ENST00000561960 MSX2P35548 267 aaPredicted RBP9.48□□□□□ -0.89
NSMCE1-202ENST00000561960 UBE2E1P51965 193 aa9.48□□□□□ -0.89
NSMCE1-202ENST00000561960 CAPZA1P52907 286 aa9.48□□□□□ -0.89
NSMCE1-202ENST00000561960 ARSJQ5FYB0 599 aaPredicted RBP9.48□□□□□ -0.89
NSMCE1-202ENST00000561960 CRIP3Q6Q6R5 217 aa9.48□□□□□ -0.89
NSMCE1-202ENST00000561960 METAP1DQ6UB28 335 aaPredicted RBP9.48□□□□□ -0.89
NSMCE1-202ENST00000561960 ZNF782Q6ZMW2 699 aaPredicted RBP9.48□□□□□ -0.89
NSMCE1-202ENST00000561960 OR4M1Q8NGD0 313 aa9.48□□□□□ -0.89
NSMCE1-202ENST00000561960 SGK3Q96BR1 496 aa9.48□□□□□ -0.89
NSMCE1-202ENST00000561960 AMELYQ99218 206 aa9.48□□□□□ -0.89
NSMCE1-202ENST00000561960 FUZQ9BT04 418 aa9.48□□□□□ -0.89
NSMCE1-202ENST00000561960 MED20Q9H944 212 aa9.48□□□□□ -0.89
NSMCE1-202ENST00000561960 C19orf12Q9NSK7 152 aa9.48□□□□□ -0.89
NSMCE1-202ENST00000561960 NOP16Q9Y3C1 178 aaKnown RBP9.48□□□□□ -0.89
NSMCE1-202ENST00000561960 MAB21L2Q9Y586 359 aa9.48□□□□□ -0.89
NSMCE1-202ENST00000561960 RYR2Q92736 4967 aa9.47□□□□□ -0.89
NSMCE1-202ENST00000561960 EPPK1P58107 5090 aaKnown RBP9.47□□□□□ -0.89
NSMCE1-202ENST00000561960 WI2-2373I1.2A0A1W2PRP0 233 aa9.47□□□□□ -0.89
NSMCE1-202ENST00000561960 ZNF593O00488 134 aaPredicted RBP9.47□□□□□ -0.89
NSMCE1-202ENST00000561960 CCL3L1P16619 93 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms