RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 SLC26A1Q9H2B4 701 aa16.59■□□□□ 0.25
RAB40C-206ENST00000561781 ARV1Q9H2C2 271 aa16.59■□□□□ 0.25
RAB40C-206ENST00000561781 C19orf67A6NJJ6 358 aa16.59■□□□□ 0.25
RAB40C-206ENST00000561781 BRS3P32247 399 aa16.59■□□□□ 0.25
RAB40C-206ENST00000561781 RUNX3Q13761 415 aa16.59■□□□□ 0.25
RAB40C-206ENST00000561781 ASTLQ6HA08 431 aaPredicted RBP16.59■□□□□ 0.25
RAB40C-206ENST00000561781 OR13C9Q8NGT0 318 aa16.59■□□□□ 0.25
RAB40C-206ENST00000561781 IRF7Q92985 503 aa16.59■□□□□ 0.25
RAB40C-206ENST00000561781 ZMAT3Q9HA38 289 aaKnown RBP16.59■□□□□ 0.25
RAB40C-206ENST00000561781 CHST11Q9NPF2 352 aa16.59■□□□□ 0.25
RAB40C-206ENST00000561781 ATG2BQ96BY7 2078 aa16.59■□□□□ 0.25
RAB40C-206ENST00000561781 LEFTY1O75610 366 aa16.58■□□□□ 0.25
RAB40C-206ENST00000561781 UPK3AO75631 287 aa16.58■□□□□ 0.25
RAB40C-206ENST00000561781 CBR3O75828 277 aa16.58■□□□□ 0.25
RAB40C-206ENST00000561781 SCAF4O95104 1147 aaKnown RBP16.58■□□□□ 0.25
RAB40C-206ENST00000561781 PRH1P02810 166 aa16.58■□□□□ 0.25
RAB40C-206ENST00000561781 FOLR1P15328 257 aa16.58■□□□□ 0.25
RAB40C-206ENST00000561781 FCGR2CP31995 323 aa16.58■□□□□ 0.25
RAB40C-206ENST00000561781 RAP1BP61224 184 aa16.58■□□□□ 0.25
RAB40C-206ENST00000561781 PMPCAQ10713 525 aa16.58■□□□□ 0.25
RAB40C-206ENST00000561781 ENPP2Q13822 863 aa16.58■□□□□ 0.25
RAB40C-206ENST00000561781 GXYLT1Q4G148 440 aa16.58■□□□□ 0.25
RAB40C-206ENST00000561781 COA6Q5JTJ3 125 aaKnown RBP16.58■□□□□ 0.25
RAB40C-206ENST00000561781 C9orf40Q8IXQ3 194 aa16.58■□□□□ 0.25
RAB40C-206ENST00000561781 POC1AQ8NBT0 407 aa16.58■□□□□ 0.25
RAB40C-206ENST00000561781 MCHR2Q969V1 340 aa16.58■□□□□ 0.25
RAB40C-206ENST00000561781 CES1P1Q9UKY3 287 aa16.58■□□□□ 0.25
RAB40C-206ENST00000561781 ZFP30Q9Y2G7 519 aa16.58■□□□□ 0.25
RAB40C-206ENST00000561781 NPIPA5A0A0B4J1W7 369 aa16.58■□□□□ 0.24
RAB40C-206ENST00000561781 DHRS7CA6NNS2 312 aa16.58■□□□□ 0.24
RAB40C-206ENST00000561781 B4DEV8 164 aa16.58■□□□□ 0.24
RAB40C-206ENST00000561781 B4E171 279 aa16.58■□□□□ 0.24
RAB40C-206ENST00000561781 FTCDNL1E5RQL4 147 aa16.58■□□□□ 0.24
RAB40C-206ENST00000561781 NPIPA7E9PJI5 369 aa16.58■□□□□ 0.24
RAB40C-206ENST00000561781 CIDEAO60543 219 aa16.58■□□□□ 0.24
RAB40C-206ENST00000561781 NPIPA8P0DM63 369 aa16.58■□□□□ 0.24
RAB40C-206ENST00000561781 ADH5P11766 374 aa16.58■□□□□ 0.24
RAB40C-206ENST00000561781 IDH3GP51553 393 aaPredicted RBP16.58■□□□□ 0.24
RAB40C-206ENST00000561781 EGR3Q06889 387 aa16.58■□□□□ 0.24
RAB40C-206ENST00000561781 POM121L1PQ3SYA9 428 aa16.58■□□□□ 0.24
RAB40C-206ENST00000561781 MFSD12Q6NUT3 480 aa16.58■□□□□ 0.24
RAB40C-206ENST00000561781 SSX7Q7RTT5 188 aa16.58■□□□□ 0.24
RAB40C-206ENST00000561781 GALNTL5Q7Z4T8 443 aa16.58■□□□□ 0.24
RAB40C-206ENST00000561781 LMF1Q96S06 567 aa16.58■□□□□ 0.24
RAB40C-206ENST00000561781 MENTQ9BUN1 341 aa16.58■□□□□ 0.24
RAB40C-206ENST00000561781 METTL8Q9H825 291 aaKnown RBP16.58■□□□□ 0.24
RAB40C-206ENST00000561781 DNAJC4Q9NNZ3 241 aa16.58■□□□□ 0.24
RAB40C-206ENST00000561781 ADAP2Q9NPF8 381 aa16.58■□□□□ 0.24
RAB40C-206ENST00000561781 OBP2AQ9NY56 170 aa16.58■□□□□ 0.24
RAB40C-206ENST00000561781 FOXD3Q9UJU5 478 aaPredicted RBP16.58■□□□□ 0.24
RAB40C-206ENST00000561781 FRYLO94915 3013 aa16.58■□□□□ 0.24
RAB40C-206ENST00000561781 KIAA1549LQ6ZVL6 1849 aa16.57■□□□□ 0.24
RAB40C-206ENST00000561781 HSD17B6O14756 317 aa16.57■□□□□ 0.24
RAB40C-206ENST00000561781 NXPH2O95156 264 aa16.57■□□□□ 0.24
RAB40C-206ENST00000561781 IFNA6P05013 189 aa16.57■□□□□ 0.24
RAB40C-206ENST00000561781 NGFRP08138 427 aa16.57■□□□□ 0.24
RAB40C-206ENST00000561781 TMEM33P57088 247 aa16.57■□□□□ 0.24
RAB40C-206ENST00000561781 IL15RAQ13261 267 aa16.57■□□□□ 0.24
RAB40C-206ENST00000561781 FAM166AQ6J272 317 aa16.57■□□□□ 0.24
RAB40C-206ENST00000561781 SLC48A1Q6P1K1 146 aa16.57■□□□□ 0.24
RAB40C-206ENST00000561781 SLC25A26Q70HW3 274 aa16.57■□□□□ 0.24
RAB40C-206ENST00000561781 ZNF676Q8N7Q3 588 aa16.57■□□□□ 0.24
RAB40C-206ENST00000561781 C5orf34Q96MH7 638 aa16.57■□□□□ 0.24
RAB40C-206ENST00000561781 ULBP3Q9BZM4 244 aa16.57■□□□□ 0.24
RAB40C-206ENST00000561781 WDR87Q6ZQQ6 2873 aa16.57■□□□□ 0.24
RAB40C-206ENST00000561781 A0A1W2PN81 502 aa16.57■□□□□ 0.24
RAB40C-206ENST00000561781 SFT2D2O95562 160 aa16.57■□□□□ 0.24
RAB40C-206ENST00000561781 IL6RP08887 468 aaPredicted RBP16.57■□□□□ 0.24
RAB40C-206ENST00000561781 CHRNA7P36544 502 aa16.57■□□□□ 0.24
RAB40C-206ENST00000561781 OR5I1Q13606 314 aa16.57■□□□□ 0.24
RAB40C-206ENST00000561781 ARHGAP11BQ3KRB8 267 aa16.57■□□□□ 0.24
RAB40C-206ENST00000561781 CHRFAM7AQ494W8 412 aa16.57■□□□□ 0.24
RAB40C-206ENST00000561781 LEMD1Q68G75 181 aa16.57■□□□□ 0.24
RAB40C-206ENST00000561781 ZNF705AQ6ZN79 300 aaPredicted RBP16.57■□□□□ 0.24
RAB40C-206ENST00000561781 ZNF429Q86V71 674 aa16.57■□□□□ 0.24
RAB40C-206ENST00000561781 ZNF547Q8IVP9 402 aa16.57■□□□□ 0.24
RAB40C-206ENST00000561781 EXTL1Q92935 676 aa16.57■□□□□ 0.24
RAB40C-206ENST00000561781 MRM2Q9UI43 246 aaKnown RBP16.57■□□□□ 0.24
RAB40C-206ENST00000561781 GTF2A1LQ9UNN4 478 aa16.57■□□□□ 0.24
RAB40C-206ENST00000561781 HEATR5BQ9P2D3 2071 aa16.57■□□□□ 0.24
RAB40C-206ENST00000561781 GOLGA4Q13439 2230 aaKnown RBP16.56■□□□□ 0.24
RAB40C-206ENST00000561781 ZDBF2Q9HCK1 2354 aa16.56■□□□□ 0.24
RAB40C-206ENST00000561781 SHISA7A6NL88 538 aa16.56■□□□□ 0.24
RAB40C-206ENST00000561781 TMEM212A6NML5 194 aa16.56■□□□□ 0.24
RAB40C-206ENST00000561781 ERI3O43414 337 aaKnown RBP16.56■□□□□ 0.24
RAB40C-206ENST00000561781 MMP7P09237 267 aaPredicted RBP16.56■□□□□ 0.24
RAB40C-206ENST00000561781 CCKARP32238 428 aa16.56■□□□□ 0.24
RAB40C-206ENST00000561781 BTNL3Q6UXE8 466 aa16.56■□□□□ 0.24
RAB40C-206ENST00000561781 SLC35E3Q7Z769 313 aa16.56■□□□□ 0.24
RAB40C-206ENST00000561781 NPEPL1Q8NDH3 523 aa16.56■□□□□ 0.24
RAB40C-206ENST00000561781 OR51A2Q8NGJ7 313 aa16.56■□□□□ 0.24
RAB40C-206ENST00000561781 FAM174AQ8TBP5 190 aa16.56■□□□□ 0.24
RAB40C-206ENST00000561781 OR10C1Q96KK4 312 aa16.56■□□□□ 0.24
RAB40C-206ENST00000561781 SDF2Q99470 211 aa16.56■□□□□ 0.24
RAB40C-206ENST00000561781 NIPSNAP3BQ9BS92 247 aa16.56■□□□□ 0.24
RAB40C-206ENST00000561781 CDH20Q9HBT6 801 aa16.56■□□□□ 0.24
RAB40C-206ENST00000561781 KLHDC2Q9Y2U9 406 aa16.56■□□□□ 0.24
RAB40C-206ENST00000561781 BORCS7-ASMTA0A0B4J1R7 106 aa16.56■□□□□ 0.24
RAB40C-206ENST00000561781 TSPAN2O60636 221 aa16.56■□□□□ 0.24
RAB40C-206ENST00000561781 IRF2P14316 349 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms