RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 GCSAMQ8N6F7 178 aa4.18□□□□□ -1.74
HERC1-213ENST00000561359 CCDC63Q8NA47 563 aa4.18□□□□□ -1.74
HERC1-213ENST00000561359 AGR3Q8TD06 166 aa4.18□□□□□ -1.74
HERC1-213ENST00000561359 SLC38A5Q8WUX1 472 aa4.18□□□□□ -1.74
HERC1-213ENST00000561359 SPRYD4Q8WW59 207 aaPredicted RBP4.18□□□□□ -1.74
HERC1-213ENST00000561359 ASB10Q8WXI3 467 aa4.18□□□□□ -1.74
HERC1-213ENST00000561359 APOBEC3DQ96AK3 386 aaPredicted RBP4.18□□□□□ -1.74
HERC1-213ENST00000561359 AKR1E2Q96JD6 320 aa4.18□□□□□ -1.74
HERC1-213ENST00000561359 RBP7Q96R05 134 aa4.18□□□□□ -1.74
HERC1-213ENST00000561359 PANX1Q96RD7 426 aa4.18□□□□□ -1.74
HERC1-213ENST00000561359 CDRT15Q96T59 188 aa4.18□□□□□ -1.74
HERC1-213ENST00000561359 TSC22D3Q99576 134 aa4.18□□□□□ -1.74
HERC1-213ENST00000561359 SEPHS2Q99611 448 aa4.18□□□□□ -1.74
HERC1-213ENST00000561359 TMEM43Q9BTV4 400 aa4.18□□□□□ -1.74
HERC1-213ENST00000561359 SMURF2Q9HAU4 748 aa4.18□□□□□ -1.74
HERC1-213ENST00000561359 ZFP57Q9NU63 452 aa4.18□□□□□ -1.74
HERC1-213ENST00000561359 NINJ2Q9NZG7 142 aa4.18□□□□□ -1.74
HERC1-213ENST00000561359 STX18Q9P2W9 335 aaKnown RBP4.18□□□□□ -1.74
HERC1-213ENST00000561359 ZNF180Q9UJW8 692 aa4.18□□□□□ -1.74
HERC1-213ENST00000561359 ANGPT4Q9Y264 503 aa4.18□□□□□ -1.74
HERC1-213ENST00000561359 UTP11Q9Y3A2 253 aaKnown RBP4.18□□□□□ -1.74
HERC1-213ENST00000561359 NOP16Q9Y3C1 178 aaKnown RBP4.18□□□□□ -1.74
HERC1-213ENST00000561359 LYVE1Q9Y5Y7 322 aa4.18□□□□□ -1.74
HERC1-213ENST00000561359 IGLV1-36A0A0B4J1U3 117 aa4.17□□□□□ -1.74
HERC1-213ENST00000561359 A0A0B4J2E0 115 aa4.17□□□□□ -1.74
HERC1-213ENST00000561359 A0A1B0GX12 115 aa4.17□□□□□ -1.74
HERC1-213ENST00000561359 TRIM64CA6NLI5 447 aa4.17□□□□□ -1.74
HERC1-213ENST00000561359 KPNA4O00629 521 aaPredicted RBP4.17□□□□□ -1.74
HERC1-213ENST00000561359 ACOT8O14734 319 aa4.17□□□□□ -1.74
HERC1-213ENST00000561359 ATP6V1G1O75348 118 aa4.17□□□□□ -1.74
HERC1-213ENST00000561359 RHBDL1O75783 438 aa4.17□□□□□ -1.74
HERC1-213ENST00000561359 KRT75O95678 551 aa4.17□□□□□ -1.74
HERC1-213ENST00000561359 VIMP08670 466 aaKnown RBP4.17□□□□□ -1.74
HERC1-213ENST00000561359 ETS2P15036 469 aa4.17□□□□□ -1.74
HERC1-213ENST00000561359 BGNP21810 368 aa4.17□□□□□ -1.74
HERC1-213ENST00000561359 AZGP1P25311 298 aaKnown RBP4.17□□□□□ -1.74
HERC1-213ENST00000561359 S100A3P33764 101 aa4.17□□□□□ -1.74
HERC1-213ENST00000561359 TGM4P49221 684 aa4.17□□□□□ -1.74
HERC1-213ENST00000561359 CDH12P55289 794 aa4.17□□□□□ -1.74
HERC1-213ENST00000561359 DSTNP60981 165 aa4.17□□□□□ -1.74
HERC1-213ENST00000561359 GMFBP60983 142 aa4.17□□□□□ -1.74
HERC1-213ENST00000561359 MAD2L1Q13257 205 aaPredicted RBP4.17□□□□□ -1.74
HERC1-213ENST00000561359 OR1Q1Q15612 314 aa4.17□□□□□ -1.74
HERC1-213ENST00000561359 ZNF74Q16587 644 aa4.17□□□□□ -1.74
HERC1-213ENST00000561359 PCK2Q16822 640 aa4.17□□□□□ -1.74
HERC1-213ENST00000561359 DEFB136Q30KP8 78 aa4.17□□□□□ -1.74
HERC1-213ENST00000561359 UGT3A2Q3SY77 523 aa4.17□□□□□ -1.74
HERC1-213ENST00000561359 SPANXN4Q5MJ08 99 aa4.17□□□□□ -1.74
HERC1-213ENST00000561359 PLBD1Q6P4A8 553 aa4.17□□□□□ -1.74
HERC1-213ENST00000561359 SLC25A47Q6Q0C1 308 aa4.17□□□□□ -1.74
HERC1-213ENST00000561359 ZDHHC24Q6UX98 284 aa4.17□□□□□ -1.74
HERC1-213ENST00000561359 TIFABQ6ZNK6 161 aa4.17□□□□□ -1.74
HERC1-213ENST00000561359 ANKRD13BQ86YJ7 626 aa4.17□□□□□ -1.74
HERC1-213ENST00000561359 C10orf107Q8IVU9 208 aa4.17□□□□□ -1.74
HERC1-213ENST00000561359 FAM185AQ8N0U4 392 aa4.17□□□□□ -1.74
HERC1-213ENST00000561359 OR5T2Q8NGG2 359 aa4.17□□□□□ -1.74
HERC1-213ENST00000561359 OR4Q3Q8NH05 313 aa4.17□□□□□ -1.74
HERC1-213ENST00000561359 BCAS4Q8TDM0 211 aa4.17□□□□□ -1.74
HERC1-213ENST00000561359 LRRC29Q8WV35 223 aa4.17□□□□□ -1.74
HERC1-213ENST00000561359 HDAC2Q92769 488 aaKnown RBP4.17□□□□□ -1.74
HERC1-213ENST00000561359 NMD3Q96D46 503 aaKnown RBP4.17□□□□□ -1.74
HERC1-213ENST00000561359 TMEM19Q96HH6 336 aa4.17□□□□□ -1.74
HERC1-213ENST00000561359 ATF6BQ99941 703 aa4.17□□□□□ -1.74
HERC1-213ENST00000561359 ADAT1Q9BUB4 502 aaKnown RBP4.17□□□□□ -1.74
HERC1-213ENST00000561359 EMC7Q9NPA0 242 aa4.17□□□□□ -1.74
HERC1-213ENST00000561359 INIPQ9NRY2 104 aa4.17□□□□□ -1.74
HERC1-213ENST00000561359 VNN3Q9NY84 501 aa4.17□□□□□ -1.74
HERC1-213ENST00000561359 SLC25A10Q9UBX3 287 aaPredicted RBP4.17□□□□□ -1.74
HERC1-213ENST00000561359 ZNF391Q9UJN7 358 aa4.17□□□□□ -1.74
HERC1-213ENST00000561359 ZNF229Q9UJW7 825 aa4.17□□□□□ -1.74
HERC1-213ENST00000561359 SLC13A4Q9UKG4 626 aa4.17□□□□□ -1.74
HERC1-213ENST00000561359 NDUFAF1Q9Y375 327 aa4.17□□□□□ -1.74
HERC1-213ENST00000561359 UBR4Q5T4S7 5183 aa4.17□□□□□ -1.74
HERC1-213ENST00000561359 hCG_1809904A0A1W2PP81 198 aa4.16□□□□□ -1.74
HERC1-213ENST00000561359 A0A1W2PPE2 198 aa4.16□□□□□ -1.74
HERC1-213ENST00000561359 A0A1W2PR64 198 aa4.16□□□□□ -1.74
HERC1-213ENST00000561359 A0A1W2PRV1 198 aa4.16□□□□□ -1.74
HERC1-213ENST00000561359 OR6C6A6NF89 314 aa4.16□□□□□ -1.74
HERC1-213ENST00000561359 FAM90A8PA6NJQ4 464 aa4.16□□□□□ -1.74
HERC1-213ENST00000561359 SH2D7A6NKC9 451 aaPredicted RBP4.16□□□□□ -1.74
HERC1-213ENST00000561359 GMDSO60547 372 aa4.16□□□□□ -1.74
HERC1-213ENST00000561359 TPPPO94811 219 aa4.16□□□□□ -1.74
HERC1-213ENST00000561359 ARG1P05089 322 aa4.16□□□□□ -1.74
HERC1-213ENST00000561359 CHRNGP07510 517 aa4.16□□□□□ -1.74
HERC1-213ENST00000561359 ASAH2BP0C7U1 165 aa4.16□□□□□ -1.74
HERC1-213ENST00000561359 IGHV4-30-4P0DP06 118 aa4.16□□□□□ -1.74
HERC1-213ENST00000561359 CPA3P15088 417 aa4.16□□□□□ -1.74
HERC1-213ENST00000561359 ALDH3A1P30838 453 aa4.16□□□□□ -1.74
HERC1-213ENST00000561359 CDKN2CP42773 168 aa4.16□□□□□ -1.74
HERC1-213ENST00000561359 OR3A4PP47883 348 aa4.16□□□□□ -1.74
HERC1-213ENST00000561359 INSL3P51460 131 aa4.16□□□□□ -1.74
HERC1-213ENST00000561359 UGT2B15P54855 530 aa4.16□□□□□ -1.74
HERC1-213ENST00000561359 RGS8P57771 180 aaPredicted RBP4.16□□□□□ -1.74
HERC1-213ENST00000561359 OR12D2P58182 307 aa4.16□□□□□ -1.74
HERC1-213ENST00000561359 SLC34A1Q06495 639 aa4.16□□□□□ -1.74
HERC1-213ENST00000561359 RPL18Q07020 188 aaKnown RBP4.16□□□□□ -1.74
HERC1-213ENST00000561359 GK2Q14410 553 aaPredicted RBP4.16□□□□□ -1.74
HERC1-213ENST00000561359 KRT72Q14CN4 511 aa4.16□□□□□ -1.74
HERC1-213ENST00000561359 SRSF7Q16629 238 aaKnown RBP eCLIP4.16□□□□□ -1.74
HERC1-213ENST00000561359 PGAP1Q75T13 922 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms