RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 METTL8Q9H825 291 aaKnown RBP2.87□□□□□ -1.95
HERC1-211ENST00000560983 ELOVL3Q9HB03 270 aa2.87□□□□□ -1.95
HERC1-211ENST00000560983 TUBG2Q9NRH3 451 aa2.87□□□□□ -1.95
HERC1-211ENST00000560983 PRDM4Q9UKN5 801 aa2.87□□□□□ -1.95
HERC1-211ENST00000560983 PRPF19Q9UMS4 504 aaKnown RBP2.87□□□□□ -1.95
HERC1-211ENST00000560983 WDR45Q9Y484 360 aa2.87□□□□□ -1.95
HERC1-211ENST00000560983 TANC2Q9HCD6 1990 aa2.87□□□□□ -1.95
HERC1-211ENST00000560983 A0A096LPI6 279 aa2.86□□□□□ -1.95
HERC1-211ENST00000560983 A0A0A0MQY5 61 aa2.86□□□□□ -1.95
HERC1-211ENST00000560983 TRAV38-1A0A0B4J264 116 aa2.86□□□□□ -1.95
HERC1-211ENST00000560983 TCRBV9S1A1TA0A576 114 aa2.86□□□□□ -1.95
HERC1-211ENST00000560983 SH2D7A6NKC9 451 aaPredicted RBP2.86□□□□□ -1.95
HERC1-211ENST00000560983 E7ESA3 106 aa2.86□□□□□ -1.95
HERC1-211ENST00000560983 G3V2L1 256 aa2.86□□□□□ -1.95
HERC1-211ENST00000560983 PLPP3O14495 311 aa2.86□□□□□ -1.95
HERC1-211ENST00000560983 HSPB6O14558 160 aa2.86□□□□□ -1.95
HERC1-211ENST00000560983 ENTPD5O75356 428 aa2.86□□□□□ -1.95
HERC1-211ENST00000560983 PTBP3O95758 552 aaKnown RBP2.86□□□□□ -1.95
HERC1-211ENST00000560983 C6orf47O95873 294 aa2.86□□□□□ -1.95
HERC1-211ENST00000560983 C1QCP02747 245 aa2.86□□□□□ -1.95
HERC1-211ENST00000560983 PGA4P0DJD7 388 aa2.86□□□□□ -1.95
HERC1-211ENST00000560983 PGA3P0DJD8 388 aa2.86□□□□□ -1.95
HERC1-211ENST00000560983 LAMP1P11279 417 aa2.86□□□□□ -1.95
HERC1-211ENST00000560983 SDC1P18827 310 aa2.86□□□□□ -1.95
HERC1-211ENST00000560983 GSTM3P21266 225 aa2.86□□□□□ -1.95
HERC1-211ENST00000560983 RPS4Y1P22090 263 aaKnown RBP2.86□□□□□ -1.95
HERC1-211ENST00000560983 PAICSP22234 425 aaKnown RBP2.86□□□□□ -1.95
HERC1-211ENST00000560983 CDAP32320 146 aa2.86□□□□□ -1.95
HERC1-211ENST00000560983 TGM4P49221 684 aa2.86□□□□□ -1.95
HERC1-211ENST00000560983 DYNLT3P51808 116 aa2.86□□□□□ -1.95
HERC1-211ENST00000560983 BIDP55957 195 aa2.86□□□□□ -1.95
HERC1-211ENST00000560983 EWSR1Q01844 656 aaKnown RBP eCLIP2.86□□□□□ -1.95
HERC1-211ENST00000560983 PDIA2Q13087 525 aaKnown RBP2.86□□□□□ -1.95
HERC1-211ENST00000560983 TAF11Q15544 211 aa2.86□□□□□ -1.95
HERC1-211ENST00000560983 OR8B8Q15620 311 aa2.86□□□□□ -1.95
HERC1-211ENST00000560983 MRPL2Q5T653 305 aaKnown RBP2.86□□□□□ -1.95
HERC1-211ENST00000560983 HHATQ5VTY9 493 aa2.86□□□□□ -1.95
HERC1-211ENST00000560983 PRAMEF6Q5VXH4 476 aa2.86□□□□□ -1.95
HERC1-211ENST00000560983 TEX36Q5VZQ5 186 aa2.86□□□□□ -1.95
HERC1-211ENST00000560983 OR2T2Q6IF00 324 aa2.86□□□□□ -1.95
HERC1-211ENST00000560983 PLBD1Q6P4A8 553 aa2.86□□□□□ -1.95
HERC1-211ENST00000560983 LINC00322Q6ZN03 302 aaPredicted RBP2.86□□□□□ -1.95
HERC1-211ENST00000560983 GPRIN3Q6ZVF9 776 aa2.86□□□□□ -1.95
HERC1-211ENST00000560983 NET1Q7Z628 596 aaPredicted RBP2.86□□□□□ -1.95
HERC1-211ENST00000560983 PIGWQ7Z7B1 504 aa2.86□□□□□ -1.95
HERC1-211ENST00000560983 CADM2Q8N3J6 435 aa2.86□□□□□ -1.95
HERC1-211ENST00000560983 KLHL30-AS1Q8NEE0 82 aa2.86□□□□□ -1.95
HERC1-211ENST00000560983 OR7A2PQ8NGA2 310 aa2.86□□□□□ -1.95
HERC1-211ENST00000560983 OR6X1Q8NH79 312 aa2.86□□□□□ -1.95
HERC1-211ENST00000560983 OR5AK3PQ8NH89 298 aa2.86□□□□□ -1.95
HERC1-211ENST00000560983 CLHC1Q8NHS4 586 aa2.86□□□□□ -1.95
HERC1-211ENST00000560983 MIPOL1Q8TD10 442 aa2.86□□□□□ -1.95
HERC1-211ENST00000560983 NABP1Q96AH0 204 aa2.86□□□□□ -1.95
HERC1-211ENST00000560983 ROPN1LQ96C74 230 aa2.86□□□□□ -1.95
HERC1-211ENST00000560983 DUS3LQ96G46 650 aaKnown RBP2.86□□□□□ -1.95
HERC1-211ENST00000560983 FCRL1Q96LA6 429 aa2.86□□□□□ -1.95
HERC1-211ENST00000560983 CCL13Q99616 98 aa2.86□□□□□ -1.95
HERC1-211ENST00000560983 OR2H1Q9GZK4 316 aa2.86□□□□□ -1.95
HERC1-211ENST00000560983 DCLRE1BQ9H816 532 aa2.86□□□□□ -1.95
HERC1-211ENST00000560983 SIAEQ9HAT2 523 aa2.86□□□□□ -1.95
HERC1-211ENST00000560983 SDF2L1Q9HCN8 221 aa2.86□□□□□ -1.95
HERC1-211ENST00000560983 POLE3Q9NRF9 147 aa2.86□□□□□ -1.95
HERC1-211ENST00000560983 UFSP2Q9NUQ7 469 aa2.86□□□□□ -1.95
HERC1-211ENST00000560983 ATP6V1HQ9UI12 483 aa2.86□□□□□ -1.95
HERC1-211ENST00000560983 PITPNC1Q9UKF7 332 aa2.86□□□□□ -1.95
HERC1-211ENST00000560983 RAP2CQ9Y3L5 183 aa2.86□□□□□ -1.95
HERC1-211ENST00000560983 UGT2A1Q9Y4X1 527 aa2.86□□□□□ -1.95
HERC1-211ENST00000560983 IGHV3OR15-7A0A075B7D8 119 aa2.85□□□□□ -1.95
HERC1-211ENST00000560983 IGKV1D-43A0A0B4J1Z2 117 aa2.85□□□□□ -1.95
HERC1-211ENST00000560983 PSMB11A5LHX3 300 aa2.85□□□□□ -1.95
HERC1-211ENST00000560983 TMEM247A6NEH6 219 aa2.85□□□□□ -1.95
HERC1-211ENST00000560983 NUPR2A6NF83 97 aa2.85□□□□□ -1.95
HERC1-211ENST00000560983 NPIPB13A6NJU9 1138 aa2.85□□□□□ -1.95
HERC1-211ENST00000560983 NPIPB5A8MRT5 1133 aa2.85□□□□□ -1.95
HERC1-211ENST00000560983 A8MT66 165 aa2.85□□□□□ -1.95
HERC1-211ENST00000560983 NPIPB4C9JG80 1138 aa2.85□□□□□ -1.95
HERC1-211ENST00000560983 LRRN3E7EW58 273 aa2.85□□□□□ -1.95
HERC1-211ENST00000560983 BUB3O43684 328 aa2.85□□□□□ -1.95
HERC1-211ENST00000560983 OR2T1O43869 369 aa2.85□□□□□ -1.95
HERC1-211ENST00000560983 SEC22BO75396 215 aa2.85□□□□□ -1.95
HERC1-211ENST00000560983 BGLAPP02818 100 aa2.85□□□□□ -1.95
HERC1-211ENST00000560983 TPM3P06753 285 aa2.85□□□□□ -1.95
HERC1-211ENST00000560983 RBP1P09455 135 aa2.85□□□□□ -1.95
HERC1-211ENST00000560983 INAFM2P0DMQ5 153 aa2.85□□□□□ -1.95
HERC1-211ENST00000560983 HMOX2P30519 316 aa2.85□□□□□ -1.95
HERC1-211ENST00000560983 CD200P41217 278 aa2.85□□□□□ -1.95
HERC1-211ENST00000560983 MAGEA4P43358 317 aa2.85□□□□□ -1.95
HERC1-211ENST00000560983 OR3A4PP47883 348 aa2.85□□□□□ -1.95
HERC1-211ENST00000560983 GLIPR1P48060 266 aa2.85□□□□□ -1.95
HERC1-211ENST00000560983 ZNF133P52736 654 aaPredicted RBP2.85□□□□□ -1.95
HERC1-211ENST00000560983 CDH12P55289 794 aa2.85□□□□□ -1.95
HERC1-211ENST00000560983 ERVK-25P63136 954 aa2.85□□□□□ -1.95
HERC1-211ENST00000560983 TPM4P67936 248 aa2.85□□□□□ -1.95
HERC1-211ENST00000560983 HBA1P69905 142 aa2.85□□□□□ -1.95
HERC1-211ENST00000560983 PUDPQ08623 228 aa2.85□□□□□ -1.95
HERC1-211ENST00000560983 SSX2Q16385 188 aa2.85□□□□□ -1.95
HERC1-211ENST00000560983 ABCA11PQ4W5N1 156 aa2.85□□□□□ -1.95
HERC1-211ENST00000560983 RFTN2Q52LD8 501 aaPredicted RBP2.85□□□□□ -1.95
HERC1-211ENST00000560983 ZNF678Q5SXM1 525 aa2.85□□□□□ -1.95
HERC1-211ENST00000560983 FAM69AQ5T7M9 428 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms