RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 A0A0U1RQV5 110 aa11.91□□□□□ -0.5
PKNOX1-209ENST00000560448 TMEM269A0A1B0GVZ9 245 aa11.91□□□□□ -0.5
PKNOX1-209ENST00000560448 IFNL4K9M1U5 179 aa11.91□□□□□ -0.5
PKNOX1-209ENST00000560448 IGHV1-46P01743 117 aa11.91□□□□□ -0.5
PKNOX1-209ENST00000560448 TACSTD2P09758 323 aa11.91□□□□□ -0.5
PKNOX1-209ENST00000560448 CD99P14209 185 aa11.91□□□□□ -0.5
PKNOX1-209ENST00000560448 SLC3A1Q07837 685 aa11.91□□□□□ -0.5
PKNOX1-209ENST00000560448 MRPL28Q13084 256 aaKnown RBP11.91□□□□□ -0.5
PKNOX1-209ENST00000560448 DGUOKQ16854 277 aa11.91□□□□□ -0.5
PKNOX1-209ENST00000560448 USP43Q70EL4 1123 aa11.91□□□□□ -0.5
PKNOX1-209ENST00000560448 SPATC1Q76KD6 591 aa11.91□□□□□ -0.5
PKNOX1-209ENST00000560448 FAM220AQ7Z4H9 259 aa11.91□□□□□ -0.5
PKNOX1-209ENST00000560448 CELF2-AS1Q8N7Q2 184 aa11.91□□□□□ -0.5
PKNOX1-209ENST00000560448 SPERTQ8NA61 448 aa11.91□□□□□ -0.5
PKNOX1-209ENST00000560448 CSNK2A3Q8NEV1 391 aa11.91□□□□□ -0.5
PKNOX1-209ENST00000560448 OR10H4Q8NGA5 316 aa11.91□□□□□ -0.5
PKNOX1-209ENST00000560448 SPRYD4Q8WW59 207 aaPredicted RBP11.91□□□□□ -0.5
PKNOX1-209ENST00000560448 ELMOD3Q96FG2 381 aa11.91□□□□□ -0.5
PKNOX1-209ENST00000560448 PGAM5Q96HS1 289 aa11.91□□□□□ -0.5
PKNOX1-209ENST00000560448 SLC30A2Q9BRI3 323 aa11.91□□□□□ -0.5
PKNOX1-209ENST00000560448 SLIRPQ9GZT3 109 aaKnown RBP11.91□□□□□ -0.5
PKNOX1-209ENST00000560448 TPK1Q9H3S4 243 aa11.91□□□□□ -0.5
PKNOX1-209ENST00000560448 POFUT1Q9H488 388 aa11.91□□□□□ -0.5
PKNOX1-209ENST00000560448 RNF167Q9H6Y7 350 aa11.91□□□□□ -0.5
PKNOX1-209ENST00000560448 ABCB9Q9NP78 766 aa11.91□□□□□ -0.5
PKNOX1-209ENST00000560448 TMEM100Q9NV29 134 aa11.91□□□□□ -0.5
PKNOX1-209ENST00000560448 NUFIP1Q9UHK0 495 aaKnown RBP11.91□□□□□ -0.5
PKNOX1-209ENST00000560448 AKAP9Q99996 3911 aa11.91□□□□□ -0.5
PKNOX1-209ENST00000560448 LOC100506127A0A0U1RQW1 187 aa11.9□□□□□ -0.5
PKNOX1-209ENST00000560448 A0A1W2PQL4 384 aaPredicted RBP11.9□□□□□ -0.5
PKNOX1-209ENST00000560448 GGT3PA6NGU5 568 aa11.9□□□□□ -0.5
PKNOX1-209ENST00000560448 CD300LBA8K4G0 201 aa11.9□□□□□ -0.5
PKNOX1-209ENST00000560448 TBX1O43435 398 aa11.9□□□□□ -0.5
PKNOX1-209ENST00000560448 GMDSO60547 372 aa11.9□□□□□ -0.5
PKNOX1-209ENST00000560448 TMEM33P57088 247 aa11.9□□□□□ -0.5
PKNOX1-209ENST00000560448 ZNF85Q03923 595 aa11.9□□□□□ -0.5
PKNOX1-209ENST00000560448 ZNF92Q03936 586 aa11.9□□□□□ -0.5
PKNOX1-209ENST00000560448 GALEQ14376 348 aa11.9□□□□□ -0.5
PKNOX1-209ENST00000560448 HLXQ14774 488 aaPredicted RBP11.9□□□□□ -0.5
PKNOX1-209ENST00000560448 GLYATL3Q5SZD4 288 aa11.9□□□□□ -0.5
PKNOX1-209ENST00000560448 LIPKQ5VXJ0 399 aa11.9□□□□□ -0.5
PKNOX1-209ENST00000560448 OR2T2Q6IF00 324 aa11.9□□□□□ -0.5
PKNOX1-209ENST00000560448 FAM57BQ71RH2 274 aa11.9□□□□□ -0.5
PKNOX1-209ENST00000560448 ZNF525Q8N782 197 aa11.9□□□□□ -0.5
PKNOX1-209ENST00000560448 CCDC54Q8NEL0 328 aa11.9□□□□□ -0.5
PKNOX1-209ENST00000560448 C10orf105Q8TEF2 133 aa11.9□□□□□ -0.5
PKNOX1-209ENST00000560448 REEP6Q96HR9 211 aa11.9□□□□□ -0.5
PKNOX1-209ENST00000560448 C18orf12Q96KH6 178 aa11.9□□□□□ -0.5
PKNOX1-209ENST00000560448 FAM206AQ9NX38 181 aa11.9□□□□□ -0.5
PKNOX1-209ENST00000560448 STUB1Q9UNE7 303 aa11.9□□□□□ -0.5
PKNOX1-209ENST00000560448 R4GMQ9 66 aa11.9□□□□□ -0.5
PKNOX1-209ENST00000560448 hCG_38984A0A1B0GV85 526 aa11.89□□□□□ -0.51
PKNOX1-209ENST00000560448 METTL15A6NJ78 407 aa11.89□□□□□ -0.51
PKNOX1-209ENST00000560448 ZSCAN5BA6NJL1 495 aa11.89□□□□□ -0.51
PKNOX1-209ENST00000560448 TPD52L2O43399 206 aaKnown RBP11.89□□□□□ -0.51
PKNOX1-209ENST00000560448 SPRY3O43610 288 aa11.89□□□□□ -0.51
PKNOX1-209ENST00000560448 MTRF1O75570 445 aaKnown RBP11.89□□□□□ -0.51
PKNOX1-209ENST00000560448 SLC2A1P11166 492 aa11.89□□□□□ -0.51
PKNOX1-209ENST00000560448 PSMA1P25786 263 aaKnown RBP11.89□□□□□ -0.51
PKNOX1-209ENST00000560448 SRP9P49458 86 aaKnown RBP11.89□□□□□ -0.51
PKNOX1-209ENST00000560448 HCCSP53701 268 aa11.89□□□□□ -0.51
PKNOX1-209ENST00000560448 CCL8P80075 99 aa11.89□□□□□ -0.51
PKNOX1-209ENST00000560448 TNFAIP6P98066 277 aaPredicted RBP11.89□□□□□ -0.51
PKNOX1-209ENST00000560448 BDH1Q02338 343 aa11.89□□□□□ -0.51
PKNOX1-209ENST00000560448 OR8B8Q15620 311 aa11.89□□□□□ -0.51
PKNOX1-209ENST00000560448 HFEQ30201 348 aa11.89□□□□□ -0.51
PKNOX1-209ENST00000560448 TMEM255AQ5JRV8 349 aa11.89□□□□□ -0.51
PKNOX1-209ENST00000560448 ZNF684Q5T5D7 378 aa11.89□□□□□ -0.51
PKNOX1-209ENST00000560448 ZCCHC24Q8N2G6 241 aaKnown RBP11.89□□□□□ -0.51
PKNOX1-209ENST00000560448 PLPP7Q8NBV4 271 aa11.89□□□□□ -0.51
PKNOX1-209ENST00000560448 UFD1Q92890 307 aa11.89□□□□□ -0.51
PKNOX1-209ENST00000560448 ERGIC1Q969X5 290 aa11.89□□□□□ -0.51
PKNOX1-209ENST00000560448 COX4I2Q96KJ9 171 aa11.89□□□□□ -0.51
PKNOX1-209ENST00000560448 ALG8Q9BVK2 526 aa11.89□□□□□ -0.51
PKNOX1-209ENST00000560448 NXF2Q9GZY0 626 aaKnown RBP11.89□□□□□ -0.51
PKNOX1-209ENST00000560448 ISG20L2Q9H9L3 353 aaKnown RBP11.89□□□□□ -0.51
PKNOX1-209ENST00000560448 CCDC59Q9P031 241 aaKnown RBP11.89□□□□□ -0.51
PKNOX1-209ENST00000560448 IGHV1-69-2A0A0G2JMI3 117 aa11.88□□□□□ -0.51
PKNOX1-209ENST00000560448 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.88□□□□□ -0.51
PKNOX1-209ENST00000560448 DAPL1A0PJW8 107 aa11.88□□□□□ -0.51
PKNOX1-209ENST00000560448 DHRS7CA6NNS2 312 aa11.88□□□□□ -0.51
PKNOX1-209ENST00000560448 ANKRD30BLA7E2S9 258 aa11.88□□□□□ -0.51
PKNOX1-209ENST00000560448 VWC2LB2RUY7 222 aa11.88□□□□□ -0.51
PKNOX1-209ENST00000560448 LOC110117498-PIK3R3F6TDL0 507 aa11.88□□□□□ -0.51
PKNOX1-209ENST00000560448 HPXP02790 462 aa11.88□□□□□ -0.51
PKNOX1-209ENST00000560448 MAGEB1P43366 347 aa11.88□□□□□ -0.51
PKNOX1-209ENST00000560448 RPS25P62851 125 aaKnown RBP11.88□□□□□ -0.51
PKNOX1-209ENST00000560448 FAM3AP98173 230 aa11.88□□□□□ -0.51
PKNOX1-209ENST00000560448 TNK1Q13470 666 aa11.88□□□□□ -0.51
PKNOX1-209ENST00000560448 ALKBH6Q3KRA9 238 aa11.88□□□□□ -0.51
PKNOX1-209ENST00000560448 CDONQ4KMG0 1287 aa11.88□□□□□ -0.51
PKNOX1-209ENST00000560448 ZBTB37Q5TC79 503 aa11.88□□□□□ -0.51
PKNOX1-209ENST00000560448 CD200R1LQ6Q8B3 271 aa11.88□□□□□ -0.51
PKNOX1-209ENST00000560448 TMPRSS11AQ6ZMR5 421 aa11.88□□□□□ -0.51
PKNOX1-209ENST00000560448 KRT74Q7RTS7 529 aa11.88□□□□□ -0.51
PKNOX1-209ENST00000560448 SYS1Q8N2H4 156 aa11.88□□□□□ -0.51
PKNOX1-209ENST00000560448 OR2Z1Q8NG97 314 aa11.88□□□□□ -0.51
PKNOX1-209ENST00000560448 OR2AE1Q8NHA4 323 aa11.88□□□□□ -0.51
PKNOX1-209ENST00000560448 SGK3Q96BR1 496 aa11.88□□□□□ -0.51
PKNOX1-209ENST00000560448 MSL2Q9HCI7 577 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms