RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 GSK3AP49840 483 aa8.82□□□□□ -1
LRRC28-216ENST00000559819 GRB2P62993 217 aaKnown RBP8.82□□□□□ -1
LRRC28-216ENST00000559819 ARFRP1Q13795 201 aa8.82□□□□□ -1
LRRC28-216ENST00000559819 UBE2V2Q15819 145 aa8.82□□□□□ -1
LRRC28-216ENST00000559819 ZNF239Q16600 458 aaKnown RBP8.82□□□□□ -1
LRRC28-216ENST00000559819 RSPO1Q2MKA7 263 aaPredicted RBP8.82□□□□□ -1
LRRC28-216ENST00000559819 ZNF468Q5VIY5 522 aaPredicted RBP8.82□□□□□ -1
LRRC28-216ENST00000559819 UNQ6126/PRO20091Q6UXV3 157 aa8.82□□□□□ -1
LRRC28-216ENST00000559819 SSC4DQ8WTU2 575 aa8.82□□□□□ -1
LRRC28-216ENST00000559819 PIGTQ969N2 578 aa8.82□□□□□ -1
LRRC28-216ENST00000559819 NABP1Q96AH0 204 aa8.82□□□□□ -1
LRRC28-216ENST00000559819 MRPS24Q96EL2 167 aaKnown RBP8.82□□□□□ -1
LRRC28-216ENST00000559819 PPA2Q9H2U2 334 aa8.82□□□□□ -1
LRRC28-216ENST00000559819 PILRBQ9UKJ0 227 aa8.82□□□□□ -1
LRRC28-216ENST00000559819 MPTX1A8MV57 137 aa8.82□□□□□ -1
LRRC28-216ENST00000559819 TNFSF11O14788 317 aa8.82□□□□□ -1
LRRC28-216ENST00000559819 NUPL2O15504 423 aaKnown RBP8.82□□□□□ -1
LRRC28-216ENST00000559819 TLX3O43711 291 aaPredicted RBP8.82□□□□□ -1
LRRC28-216ENST00000559819 ZIC3O60481 467 aa8.82□□□□□ -1
LRRC28-216ENST00000559819 ADAP1O75689 374 aa8.82□□□□□ -1
LRRC28-216ENST00000559819 OR2F2O95006 317 aa8.82□□□□□ -1
LRRC28-216ENST00000559819 GSTP1P09211 210 aaKnown RBP8.82□□□□□ -1
LRRC28-216ENST00000559819 HLA-GP17693 338 aa8.82□□□□□ -1
LRRC28-216ENST00000559819 H3F3AP84243 136 aa8.82□□□□□ -1
LRRC28-216ENST00000559819 OR2F1Q13607 317 aa8.82□□□□□ -1
LRRC28-216ENST00000559819 KISS1Q15726 138 aa8.82□□□□□ -1
LRRC28-216ENST00000559819 PMS2CLQ68D20 193 aa8.82□□□□□ -1
LRRC28-216ENST00000559819 ELP2Q6IA86 826 aa8.82□□□□□ -1
LRRC28-216ENST00000559819 ACOT7LQ6ZUV0 252 aa8.82□□□□□ -1
LRRC28-216ENST00000559819 BHLHE23Q8NDY6 225 aa8.82□□□□□ -1
LRRC28-216ENST00000559819 OR13G1Q8NGZ3 307 aa8.82□□□□□ -1
LRRC28-216ENST00000559819 TMEM54Q969K7 222 aa8.82□□□□□ -1
LRRC28-216ENST00000559819 IMMP1LQ96LU5 166 aa8.82□□□□□ -1
LRRC28-216ENST00000559819 NUDT16L1Q9BRJ7 211 aaKnown RBP8.82□□□□□ -1
LRRC28-216ENST00000559819 DKKL1Q9UK85 242 aa8.82□□□□□ -1
LRRC28-216ENST00000559819 ANAPC10Q9UM13 185 aa8.82□□□□□ -1
LRRC28-216ENST00000559819 HS3ST3B1Q9Y662 390 aa8.82□□□□□ -1
LRRC28-216ENST00000559819 TRIOBPQ9H2D6 2365 aa8.82□□□□□ -1
LRRC28-216ENST00000559819 LOC102723996A0A087X1L8 192 aa8.82□□□□□ -1
LRRC28-216ENST00000559819 NPIPA2E9PIF3 369 aa8.82□□□□□ -1
LRRC28-216ENST00000559819 NPIPA3F8WFD2 350 aa8.82□□□□□ -1
LRRC28-216ENST00000559819 DUS4LO95620 317 aaKnown RBP8.82□□□□□ -1
LRRC28-216ENST00000559819 PDGFBP01127 241 aaPredicted RBP8.82□□□□□ -1
LRRC28-216ENST00000559819 LIFP15018 202 aa8.82□□□□□ -1
LRRC28-216ENST00000559819 AMY2BP19961 511 aa8.82□□□□□ -1
LRRC28-216ENST00000559819 STARP49675 285 aa8.82□□□□□ -1
LRRC28-216ENST00000559819 ATRAIDQ6UW56 229 aa8.82□□□□□ -1
LRRC28-216ENST00000559819 HSD17B13Q7Z5P4 300 aaPredicted RBP8.82□□□□□ -1
LRRC28-216ENST00000559819 OR9K2Q8NGE7 335 aa8.82□□□□□ -1
LRRC28-216ENST00000559819 OR56B1Q8NGI3 324 aa8.82□□□□□ -1
LRRC28-216ENST00000559819 TERB2Q8NHR7 220 aa8.82□□□□□ -1
LRRC28-216ENST00000559819 THAP6Q8TBB0 222 aa8.82□□□□□ -1
LRRC28-216ENST00000559819 SRXN1Q9BYN0 137 aa8.82□□□□□ -1
LRRC28-216ENST00000559819 SHARPINQ9H0F6 387 aa8.82□□□□□ -1
LRRC28-216ENST00000559819 OR10A2Q9H208 303 aa8.82□□□□□ -1
LRRC28-216ENST00000559819 SLC25A32Q9H2D1 315 aa8.82□□□□□ -1
LRRC28-216ENST00000559819 NELFAQ9H3P2 528 aa8.82□□□□□ -1
LRRC28-216ENST00000559819 ELL3Q9HB65 397 aaPredicted RBP8.82□□□□□ -1
LRRC28-216ENST00000559819 BARX1Q9HBU1 254 aaPredicted RBP8.82□□□□□ -1
LRRC28-216ENST00000559819 GPR132Q9UNW8 380 aa8.82□□□□□ -1
LRRC28-216ENST00000559819 CSAG2Q9Y5P2 127 aa8.82□□□□□ -1
LRRC28-216ENST00000559819 RTTNQ86VV8 2226 aa8.81□□□□□ -1
LRRC28-216ENST00000559819 A0A0G2JMM0 328 aa8.81□□□□□ -1
LRRC28-216ENST00000559819 A0A0J9YW62 118 aa8.81□□□□□ -1
LRRC28-216ENST00000559819 A0A1W2PPB8 328 aa8.81□□□□□ -1
LRRC28-216ENST00000559819 A0A1W2PRS3 328 aa8.81□□□□□ -1
LRRC28-216ENST00000559819 DBX1A6NMT0 343 aa8.81□□□□□ -1
LRRC28-216ENST00000559819 KIR3DP1A8MWS1 328 aa8.81□□□□□ -1
LRRC28-216ENST00000559819 KRBOX1C9JBD0 128 aa8.81□□□□□ -1
LRRC28-216ENST00000559819 KLF7O75840 302 aaPredicted RBP8.81□□□□□ -1
LRRC28-216ENST00000559819 HPNP05981 417 aa8.81□□□□□ -1
LRRC28-216ENST00000559819 FCGR2AP12318 317 aa8.81□□□□□ -1
LRRC28-216ENST00000559819 ARHGDIBP52566 201 aa8.81□□□□□ -1
LRRC28-216ENST00000559819 ZNF345Q14585 488 aa8.81□□□□□ -1
LRRC28-216ENST00000559819 TMEM123Q8N131 208 aa8.81□□□□□ -1
LRRC28-216ENST00000559819 OR5H2Q8NGV7 314 aa8.81□□□□□ -1
LRRC28-216ENST00000559819 DCUN1D4Q92564 292 aa8.81□□□□□ -1
LRRC28-216ENST00000559819 ANGPTL4Q9BY76 406 aa8.81□□□□□ -1
LRRC28-216ENST00000559819 PIGLQ9Y2B2 252 aa8.81□□□□□ -1
LRRC28-216ENST00000559819 VPS13AQ96RL7 3174 aa8.81□□□□□ -1
LRRC28-216ENST00000559819 LOC102725191A0A1B0GVB3 256 aa8.81□□□□□ -1
LRRC28-216ENST00000559819 F5H0A9 414 aaPredicted RBP8.81□□□□□ -1
LRRC28-216ENST00000559819 H0YIZ8 118 aa8.81□□□□□ -1
LRRC28-216ENST00000559819 DHHO43323 396 aa8.81□□□□□ -1
LRRC28-216ENST00000559819 IGLV3-1P01715 115 aa8.81□□□□□ -1
LRRC28-216ENST00000559819 CRHP06850 196 aa8.81□□□□□ -1
LRRC28-216ENST00000559819 PRF1P14222 555 aa8.81□□□□□ -1
LRRC28-216ENST00000559819 PGAM2P15259 253 aa8.81□□□□□ -1
LRRC28-216ENST00000559819 TBPP20226 339 aa8.81□□□□□ -1
LRRC28-216ENST00000559819 BLVRBP30043 206 aaPredicted RBP8.81□□□□□ -1
LRRC28-216ENST00000559819 PTGFRP43088 359 aa8.81□□□□□ -1
LRRC28-216ENST00000559819 SSR4P51571 173 aa8.81□□□□□ -1
LRRC28-216ENST00000559819 LSM6P62312 80 aaKnown RBP8.81□□□□□ -1
LRRC28-216ENST00000559819 RIPPLY1Q0D2K3 151 aa8.81□□□□□ -1
LRRC28-216ENST00000559819 SNAI3Q3KNW1 292 aa8.81□□□□□ -1
LRRC28-216ENST00000559819 ANKRD55Q3KP44 614 aa8.81□□□□□ -1
LRRC28-216ENST00000559819 VAX1Q5SQQ9 334 aa8.81□□□□□ -1
LRRC28-216ENST00000559819 FAHD2BQ6P2I3 314 aaPredicted RBP8.81□□□□□ -1
LRRC28-216ENST00000559819 OPN5Q6U736 354 aa8.81□□□□□ -1
LRRC28-216ENST00000559819 CLEC18BQ6UXF7 455 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms