RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 IMPAD1Q9NX62 359 aa6.86□□□□□ -1.31
SNX1-207ENST00000559401 ZNF319Q9P2F9 582 aa6.86□□□□□ -1.31
SNX1-207ENST00000559401 CLN8Q9UBY8 286 aa6.86□□□□□ -1.31
SNX1-207ENST00000559401 COPS3Q9UNS2 423 aa6.86□□□□□ -1.31
SNX1-207ENST00000559401 RHBDD3Q9Y3P4 386 aa6.86□□□□□ -1.31
SNX1-207ENST00000559401 AUP1Q9Y679 476 aa6.86□□□□□ -1.31
SNX1-207ENST00000559401 MXRA5Q9NR99 2828 aa6.86□□□□□ -1.31
SNX1-207ENST00000559401 IGHV3OR15-7A0A075B7D8 119 aa6.85□□□□□ -1.31
SNX1-207ENST00000559401 TRAV38-1A0A0B4J264 116 aa6.85□□□□□ -1.31
SNX1-207ENST00000559401 OOEPA6NGQ2 149 aa6.85□□□□□ -1.31
SNX1-207ENST00000559401 ZNF850A8MQ14 1090 aa6.85□□□□□ -1.31
SNX1-207ENST00000559401 A8MXK9 166 aa6.85□□□□□ -1.31
SNX1-207ENST00000559401 LOC110117498-PIK3R3F6TDL0 507 aa6.85□□□□□ -1.31
SNX1-207ENST00000559401 TRAPPC2LH3BP13 241 aa6.85□□□□□ -1.31
SNX1-207ENST00000559401 EI24O14681 340 aa6.85□□□□□ -1.31
SNX1-207ENST00000559401 ADAM20O43506 726 aa6.85□□□□□ -1.31
SNX1-207ENST00000559401 ZNF254O75437 659 aa6.85□□□□□ -1.31
SNX1-207ENST00000559401 APOL3O95236 402 aa6.85□□□□□ -1.31
SNX1-207ENST00000559401 GYPAP02724 150 aa6.85□□□□□ -1.31
SNX1-207ENST00000559401 ZNF12P17014 697 aa6.85□□□□□ -1.31
SNX1-207ENST00000559401 POLR2IP36954 125 aaKnown RBP6.85□□□□□ -1.31
SNX1-207ENST00000559401 MAP2K3P46734 347 aa6.85□□□□□ -1.31
SNX1-207ENST00000559401 CDC42P60953 191 aa6.85□□□□□ -1.31
SNX1-207ENST00000559401 GMFBP60983 142 aa6.85□□□□□ -1.31
SNX1-207ENST00000559401 CSNK2BP67870 215 aa6.85□□□□□ -1.31
SNX1-207ENST00000559401 IL5RAQ01344 420 aa6.85□□□□□ -1.31
SNX1-207ENST00000559401 ZNF154Q13106 437 aa6.85□□□□□ -1.31
SNX1-207ENST00000559401 AADACL4Q5VUY2 407 aa6.85□□□□□ -1.31
SNX1-207ENST00000559401 ZFP1Q6P2D0 407 aa6.85□□□□□ -1.31
SNX1-207ENST00000559401 DEGS2Q6QHC5 323 aa6.85□□□□□ -1.31
SNX1-207ENST00000559401 ZNF322Q6U7Q0 402 aaPredicted RBP6.85□□□□□ -1.31
SNX1-207ENST00000559401 PLEKHG7Q6ZR37 379 aa6.85□□□□□ -1.31
SNX1-207ENST00000559401 C1orf229Q6ZS94 237 aaPredicted RBP6.85□□□□□ -1.31
SNX1-207ENST00000559401 C10orf67Q8IYJ2 551 aa6.85□□□□□ -1.31
SNX1-207ENST00000559401 ZDHHC23Q8IYP9 409 aa6.85□□□□□ -1.31
SNX1-207ENST00000559401 ZNF679Q8IYX0 411 aa6.85□□□□□ -1.31
SNX1-207ENST00000559401 PLPP7Q8NBV4 271 aa6.85□□□□□ -1.31
SNX1-207ENST00000559401 C22orf15Q8WYQ4 148 aa6.85□□□□□ -1.31
SNX1-207ENST00000559401 FAM71F1Q96KD3 344 aaPredicted RBP6.85□□□□□ -1.31
SNX1-207ENST00000559401 RAB3IPQ96QF0 476 aaPredicted RBP6.85□□□□□ -1.31
SNX1-207ENST00000559401 APOL4Q9BPW4 351 aa6.85□□□□□ -1.31
SNX1-207ENST00000559401 C19orf24Q9BVV8 132 aa6.85□□□□□ -1.31
SNX1-207ENST00000559401 OSBPL10Q9BXB5 764 aa6.85□□□□□ -1.31
SNX1-207ENST00000559401 GABARAPL3Q9BY60 117 aa6.85□□□□□ -1.31
SNX1-207ENST00000559401 PBOV1Q9GZY1 135 aa6.85□□□□□ -1.31
SNX1-207ENST00000559401 PPP1R3EQ9H7J1 279 aa6.85□□□□□ -1.31
SNX1-207ENST00000559401 ABCB9Q9NP78 766 aa6.85□□□□□ -1.31
SNX1-207ENST00000559401 TRIM36Q9NQ86 728 aa6.85□□□□□ -1.31
SNX1-207ENST00000559401 ERVK-18Q9QC07 812 aa6.85□□□□□ -1.31
SNX1-207ENST00000559401 ZNF391Q9UJN7 358 aa6.85□□□□□ -1.31
SNX1-207ENST00000559401 INSIG2Q9Y5U4 225 aa6.85□□□□□ -1.31
SNX1-207ENST00000559401 MPC1Q9Y5U8 109 aa6.85□□□□□ -1.31
SNX1-207ENST00000559401 DOCK11Q5JSL3 2073 aa6.85□□□□□ -1.31
SNX1-207ENST00000559401 COL6A5A8TX70 2615 aa6.84□□□□□ -1.31
SNX1-207ENST00000559401 PPIAL4CA0A0B4J2A2 164 aa6.84□□□□□ -1.31
SNX1-207ENST00000559401 IGHV2-70DA0A0C4DH43 119 aa6.84□□□□□ -1.31
SNX1-207ENST00000559401 ZNF816-ZNF321PA0A0X1KG74 233 aa6.84□□□□□ -1.31
SNX1-207ENST00000559401 PRR32B1ATL7 298 aa6.84□□□□□ -1.31
SNX1-207ENST00000559401 MAGEB4O15481 346 aaPredicted RBP6.84□□□□□ -1.31
SNX1-207ENST00000559401 RPP14O95059 124 aaKnown RBP6.84□□□□□ -1.31
SNX1-207ENST00000559401 PTBP3O95758 552 aaKnown RBP6.84□□□□□ -1.31
SNX1-207ENST00000559401 KRT8P05787 483 aa6.84□□□□□ -1.31
SNX1-207ENST00000559401 EGR1P18146 543 aa6.84□□□□□ -1.31
SNX1-207ENST00000559401 CPT2P23786 658 aa6.84□□□□□ -1.31
SNX1-207ENST00000559401 FPR2P25090 351 aa6.84□□□□□ -1.31
SNX1-207ENST00000559401 ACKR3P25106 362 aa6.84□□□□□ -1.31
SNX1-207ENST00000559401 ROM1Q03395 351 aa6.84□□□□□ -1.31
SNX1-207ENST00000559401 MFGE8Q08431 387 aaPredicted RBP6.84□□□□□ -1.31
SNX1-207ENST00000559401 POU4F2Q12837 409 aa6.84□□□□□ -1.31
SNX1-207ENST00000559401 ZIK1Q3SY52 487 aaPredicted RBP6.84□□□□□ -1.31
SNX1-207ENST00000559401 BCL2L15Q5TBC7 163 aa6.84□□□□□ -1.31
SNX1-207ENST00000559401 WDR25Q64LD2 544 aaPredicted RBP6.84□□□□□ -1.31
SNX1-207ENST00000559401 WDR86Q86TI4 376 aa6.84□□□□□ -1.31
SNX1-207ENST00000559401 GCSAMQ8N6F7 178 aa6.84□□□□□ -1.31
SNX1-207ENST00000559401 YIPF7Q8N8F6 280 aa6.84□□□□□ -1.31
SNX1-207ENST00000559401 SEMA6DQ8NFY4 1073 aa6.84□□□□□ -1.31
SNX1-207ENST00000559401 OR1M1Q8NGA1 313 aa6.84□□□□□ -1.31
SNX1-207ENST00000559401 OR10H4Q8NGA5 316 aa6.84□□□□□ -1.31
SNX1-207ENST00000559401 OR8J1Q8NGP2 316 aa6.84□□□□□ -1.31
SNX1-207ENST00000559401 SPATA3Q8NHX4 192 aa6.84□□□□□ -1.31
SNX1-207ENST00000559401 OR51E1Q8TCB6 317 aa6.84□□□□□ -1.31
SNX1-207ENST00000559401 RFKQ969G6 155 aa6.84□□□□□ -1.31
SNX1-207ENST00000559401 ITPKCQ96DU7 683 aa6.84□□□□□ -1.31
SNX1-207ENST00000559401 RNF170Q96K19 258 aa6.84□□□□□ -1.31
SNX1-207ENST00000559401 LYZL4Q96KX0 146 aa6.84□□□□□ -1.31
SNX1-207ENST00000559401 MNTQ99583 582 aa6.84□□□□□ -1.31
SNX1-207ENST00000559401 SLC6A7Q99884 636 aa6.84□□□□□ -1.31
SNX1-207ENST00000559401 NUDT16L1Q9BRJ7 211 aaKnown RBP6.84□□□□□ -1.31
SNX1-207ENST00000559401 SUCNR1Q9BXA5 334 aa6.84□□□□□ -1.31
SNX1-207ENST00000559401 ADGRL4Q9HBW9 690 aa6.84□□□□□ -1.31
SNX1-207ENST00000559401 GPR84Q9NQS5 396 aa6.84□□□□□ -1.31
SNX1-207ENST00000559401 CLN6Q9NWW5 311 aa6.84□□□□□ -1.31
SNX1-207ENST00000559401 FAM206AQ9NX38 181 aa6.84□□□□□ -1.31
SNX1-207ENST00000559401 DNAJB11Q9UBS4 358 aa6.84□□□□□ -1.31
SNX1-207ENST00000559401 WARS2Q9UGM6 360 aaKnown RBP6.84□□□□□ -1.31
SNX1-207ENST00000559401 OPN4Q9UHM6 478 aa6.84□□□□□ -1.31
SNX1-207ENST00000559401 ANK3Q12955 4377 aaKnown RBP6.83□□□□□ -1.32
SNX1-207ENST00000559401 IGHV3OR16-10A0A075B7F0 116 aa6.83□□□□□ -1.32
SNX1-207ENST00000559401 A0A0A6YYJ9 748 aa6.83□□□□□ -1.32
SNX1-207ENST00000559401 TRAV40A0A0B4J280 105 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms