RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 LGALS14Q8TCE9 139 aa14.29□□□□□ -0.12
TPM1-219ENST00000559397 ADAT3Q96EY9 351 aaPredicted RBP14.29□□□□□ -0.12
TPM1-219ENST00000559397 LYZL4Q96KX0 146 aa14.29□□□□□ -0.12
TPM1-219ENST00000559397 SOX7Q9BT81 388 aa14.29□□□□□ -0.12
TPM1-219ENST00000559397 CRIM1Q9NZV1 1036 aa14.29□□□□□ -0.12
TPM1-219ENST00000559397 N6AMT1Q9Y5N5 214 aa14.29□□□□□ -0.12
TPM1-219ENST00000559397 A0A1B0GVG6 124 aa14.28□□□□□ -0.12
TPM1-219ENST00000559397 FAM25AB3EWG3 89 aa14.28□□□□□ -0.12
TPM1-219ENST00000559397 FAM25CB3EWG5 89 aa14.28□□□□□ -0.12
TPM1-219ENST00000559397 FAM25GB3EWG6 89 aa14.28□□□□□ -0.12
TPM1-219ENST00000559397 CECR9P0C854 216 aa14.28□□□□□ -0.12
TPM1-219ENST00000559397 SLC6A9P48067 706 aa14.28□□□□□ -0.12
TPM1-219ENST00000559397 HGFACQ04756 655 aa14.28□□□□□ -0.12
TPM1-219ENST00000559397 PLP2Q04941 152 aa14.28□□□□□ -0.12
TPM1-219ENST00000559397 OR4M1Q8NGD0 313 aa14.28□□□□□ -0.12
TPM1-219ENST00000559397 OR14K1Q8NGZ2 314 aa14.28□□□□□ -0.12
TPM1-219ENST00000559397 LIN7BQ9HAP6 207 aa14.28□□□□□ -0.12
TPM1-219ENST00000559397 EXTL2Q9UBQ6 330 aa14.28□□□□□ -0.12
TPM1-219ENST00000559397 OR5V1Q9UGF6 321 aa14.28□□□□□ -0.12
TPM1-219ENST00000559397 STEAP1Q9UHE8 339 aa14.28□□□□□ -0.12
TPM1-219ENST00000559397 GCN1Q92616 2671 aaKnown RBP14.28□□□□□ -0.12
TPM1-219ENST00000559397 ANKHD1Q8IWZ3 2542 aaKnown RBP14.28□□□□□ -0.12
TPM1-219ENST00000559397 LOC100509620A0A075B734 347 aa14.27□□□□□ -0.12
TPM1-219ENST00000559397 LOC390937A0A1W2PQ73 354 aa14.27□□□□□ -0.12
TPM1-219ENST00000559397 A1L4Q6 167 aa14.27□□□□□ -0.12
TPM1-219ENST00000559397 M0R1B8 84 aa14.27□□□□□ -0.12
TPM1-219ENST00000559397 SLC17A2O00624 439 aa14.27□□□□□ -0.12
TPM1-219ENST00000559397 STOMP27105 288 aa14.27□□□□□ -0.12
TPM1-219ENST00000559397 P2RY14Q15391 338 aa14.27□□□□□ -0.12
TPM1-219ENST00000559397 GLT8D1Q68CQ7 371 aa14.27□□□□□ -0.12
TPM1-219ENST00000559397 OR51A2Q8NGJ7 313 aa14.27□□□□□ -0.12
TPM1-219ENST00000559397 POM121L2Q96KW2 1035 aa14.27□□□□□ -0.12
TPM1-219ENST00000559397 OR10A2Q9H208 303 aa14.27□□□□□ -0.12
TPM1-219ENST00000559397 SP140LQ9H930 580 aa14.27□□□□□ -0.12
TPM1-219ENST00000559397 ETV7Q9Y603 341 aa14.27□□□□□ -0.12
TPM1-219ENST00000559397 V9GYS6 101 aa14.27□□□□□ -0.12
TPM1-219ENST00000559397 DPRXA6NFQ7 191 aa14.26□□□□□ -0.13
TPM1-219ENST00000559397 CLDN12P56749 244 aa14.26□□□□□ -0.13
TPM1-219ENST00000559397 BAK1Q16611 211 aa14.26□□□□□ -0.13
TPM1-219ENST00000559397 SNAI3Q3KNW1 292 aa14.26□□□□□ -0.13
TPM1-219ENST00000559397 UBE2NLQ5JXB2 153 aa14.26□□□□□ -0.13
TPM1-219ENST00000559397 MEX3BQ6ZN04 569 aaKnown RBP14.26□□□□□ -0.13
TPM1-219ENST00000559397 Q6ZNX1 250 aa14.26□□□□□ -0.13
TPM1-219ENST00000559397 NKAIN3Q8N8D7 197 aa14.26□□□□□ -0.13
TPM1-219ENST00000559397 SLC30A7Q8NEW0 376 aa14.26□□□□□ -0.13
TPM1-219ENST00000559397 OR5D14Q8NGL3 314 aa14.26□□□□□ -0.13
TPM1-219ENST00000559397 FAM222BQ8WU58 562 aa14.26□□□□□ -0.13
TPM1-219ENST00000559397 SLC25A28Q96A46 364 aa14.26□□□□□ -0.13
TPM1-219ENST00000559397 SGK3Q96BR1 496 aa14.26□□□□□ -0.13
TPM1-219ENST00000559397 FAM71F1Q96KD3 344 aaPredicted RBP14.26□□□□□ -0.13
TPM1-219ENST00000559397 SPOCK3Q9BQ16 436 aa14.26□□□□□ -0.13
TPM1-219ENST00000559397 NGBQ9NPG2 151 aa14.26□□□□□ -0.13
TPM1-219ENST00000559397 RHBDD3Q9Y3P4 386 aa14.26□□□□□ -0.13
TPM1-219ENST00000559397 UTP20O75691 2785 aaKnown RBP14.26□□□□□ -0.13
TPM1-219ENST00000559397 NBPF19A0A087WUL8 3843 aa14.26□□□□□ -0.13
TPM1-219ENST00000559397 SIAH2O43255 324 aa14.26□□□□□ -0.13
TPM1-219ENST00000559397 CCL2P13500 99 aa14.26□□□□□ -0.13
TPM1-219ENST00000559397 AZGP1P25311 298 aaKnown RBP14.26□□□□□ -0.13
TPM1-219ENST00000559397 CD40P25942 277 aa14.26□□□□□ -0.13
TPM1-219ENST00000559397 APLNRP35414 380 aa14.26□□□□□ -0.13
TPM1-219ENST00000559397 TALDO1P37837 337 aa14.26□□□□□ -0.13
TPM1-219ENST00000559397 OXA1LQ15070 435 aa14.26□□□□□ -0.13
TPM1-219ENST00000559397 PYDC2Q56P42 97 aa14.26□□□□□ -0.13
TPM1-219ENST00000559397 C1orf100Q5SVJ3 147 aa14.26□□□□□ -0.13
TPM1-219ENST00000559397 DCDC5Q6ZRR9 648 aa14.26□□□□□ -0.13
TPM1-219ENST00000559397 COMMD2Q86X83 199 aa14.26□□□□□ -0.13
TPM1-219ENST00000559397 OR8H2Q8N162 312 aa14.26□□□□□ -0.13
TPM1-219ENST00000559397 CENPSQ8N2Z9 138 aa14.26□□□□□ -0.13
TPM1-219ENST00000559397 PAQR4Q8N4S7 273 aaPredicted RBP14.26□□□□□ -0.13
TPM1-219ENST00000559397 OR1M1Q8NGA1 313 aa14.26□□□□□ -0.13
TPM1-219ENST00000559397 SLC25A38Q96DW6 304 aa14.26□□□□□ -0.13
TPM1-219ENST00000559397 ABCG5Q9H222 651 aa14.26□□□□□ -0.13
TPM1-219ENST00000559397 C14orf119Q9NWQ9 140 aa14.26□□□□□ -0.13
TPM1-219ENST00000559397 DHRS3O75911 302 aa14.25□□□□□ -0.13
TPM1-219ENST00000559397 CSF3P09919 207 aa14.25□□□□□ -0.13
TPM1-219ENST00000559397 IL7P13232 177 aa14.25□□□□□ -0.13
TPM1-219ENST00000559397 ZNF35P13682 527 aa14.25□□□□□ -0.13
TPM1-219ENST00000559397 ZNF20P17024 532 aa14.25□□□□□ -0.13
TPM1-219ENST00000559397 PTAFRP25105 342 aa14.25□□□□□ -0.13
TPM1-219ENST00000559397 BDKRB2P30411 391 aa14.25□□□□□ -0.13
TPM1-219ENST00000559397 NAAAQ02083 359 aa14.25□□□□□ -0.13
TPM1-219ENST00000559397 SPOCK1Q08629 439 aa14.25□□□□□ -0.13
TPM1-219ENST00000559397 IL18Q14116 193 aa14.25□□□□□ -0.13
TPM1-219ENST00000559397 RAB11BQ15907 218 aa14.25□□□□□ -0.13
TPM1-219ENST00000559397 COLCA1Q6ZS62 124 aa14.25□□□□□ -0.13
TPM1-219ENST00000559397 PGAP1Q75T13 922 aa14.25□□□□□ -0.13
TPM1-219ENST00000559397 CMTM4Q8IZR5 234 aa14.25□□□□□ -0.13
TPM1-219ENST00000559397 FOXRED1Q96CU9 486 aaPredicted RBP14.25□□□□□ -0.13
TPM1-219ENST00000559397 C10orf35Q96D05 121 aa14.25□□□□□ -0.13
TPM1-219ENST00000559397 PSMG3-AS1Q96PY0 264 aa14.25□□□□□ -0.13
TPM1-219ENST00000559397 TMEM138Q9NPI0 162 aa14.25□□□□□ -0.13
TPM1-219ENST00000559397 ZNF391Q9UJN7 358 aa14.25□□□□□ -0.13
TPM1-219ENST00000559397 A0A0G2JMP0 313 aa14.24□□□□□ -0.13
TPM1-219ENST00000559397 A0A0X1KG70 313 aa14.24□□□□□ -0.13
TPM1-219ENST00000559397 C5orf49A4QMS7 147 aa14.24□□□□□ -0.13
TPM1-219ENST00000559397 DHRS7CA6NNS2 312 aa14.24□□□□□ -0.13
TPM1-219ENST00000559397 DEFB108AA8MXU0 73 aa14.24□□□□□ -0.13
TPM1-219ENST00000559397 LOXP28300 417 aaPredicted RBP14.24□□□□□ -0.13
TPM1-219ENST00000559397 CALCRP30988 508 aa14.24□□□□□ -0.13
TPM1-219ENST00000559397 GNALP38405 381 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms