RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 VPREB3Q9UKI3 123 aa7.93□□□□□ -1.14
SPG11-212ENST00000558790 SIGLEC7Q9Y286 467 aa7.93□□□□□ -1.14
SPG11-212ENST00000558790 DSCAML1Q8TD84 2053 aa7.93□□□□□ -1.14
SPG11-212ENST00000558790 DNAH7Q8WXX0 4024 aa7.93□□□□□ -1.14
SPG11-212ENST00000558790 IGLV1-36A0A0B4J1U3 117 aa7.92□□□□□ -1.14
SPG11-212ENST00000558790 A0A1B0GW55 424 aa7.92□□□□□ -1.14
SPG11-212ENST00000558790 C5orf63A6NC05 138 aa7.92□□□□□ -1.14
SPG11-212ENST00000558790 OOEPA6NGQ2 149 aa7.92□□□□□ -1.14
SPG11-212ENST00000558790 BBIP1A8MTZ0 92 aa7.92□□□□□ -1.14
SPG11-212ENST00000558790 F5H5K5 113 aa7.92□□□□□ -1.14
SPG11-212ENST00000558790 PTBP3O95758 552 aaKnown RBP7.92□□□□□ -1.14
SPG11-212ENST00000558790 ZNF682O95780 498 aa7.92□□□□□ -1.14
SPG11-212ENST00000558790 CSF1P09603 554 aa7.92□□□□□ -1.14
SPG11-212ENST00000558790 DUX4L2P0CJ85 424 aa7.92□□□□□ -1.14
SPG11-212ENST00000558790 DUX4L3P0CJ86 424 aa7.92□□□□□ -1.14
SPG11-212ENST00000558790 DUX4L4P0CJ87 422 aa7.92□□□□□ -1.14
SPG11-212ENST00000558790 DUX4L5P0CJ88 424 aa7.92□□□□□ -1.14
SPG11-212ENST00000558790 DUX4L6P0CJ89 424 aa7.92□□□□□ -1.14
SPG11-212ENST00000558790 DUX4L7P0CJ90 424 aa7.92□□□□□ -1.14
SPG11-212ENST00000558790 ARF6P62330 175 aa7.92□□□□□ -1.14
SPG11-212ENST00000558790 PRB3Q04118 309 aaPredicted RBP7.92□□□□□ -1.14
SPG11-212ENST00000558790 TRAP1Q12931 704 aaKnown RBP7.92□□□□□ -1.14
SPG11-212ENST00000558790 SNAI3Q3KNW1 292 aa7.92□□□□□ -1.14
SPG11-212ENST00000558790 SLC18B1Q6NT16 456 aa7.92□□□□□ -1.14
SPG11-212ENST00000558790 DUX4L9Q6RFH8 374 aaPredicted RBP7.92□□□□□ -1.14
SPG11-212ENST00000558790 PGAP1Q75T13 922 aa7.92□□□□□ -1.14
SPG11-212ENST00000558790 BTN2A1Q7KYR7 527 aa7.92□□□□□ -1.14
SPG11-212ENST00000558790 MRPL21Q7Z2W9 205 aaKnown RBP7.92□□□□□ -1.14
SPG11-212ENST00000558790 VMO1Q7Z5L0 202 aa7.92□□□□□ -1.14
SPG11-212ENST00000558790 NAA40Q86UY6 237 aa7.92□□□□□ -1.14
SPG11-212ENST00000558790 PRR18Q8N4B5 295 aa7.92□□□□□ -1.14
SPG11-212ENST00000558790 SLC26A10Q8NG04 563 aa7.92□□□□□ -1.14
SPG11-212ENST00000558790 SLC7A13Q8TCU3 470 aa7.92□□□□□ -1.14
SPG11-212ENST00000558790 SPRYD4Q8WW59 207 aaPredicted RBP7.92□□□□□ -1.14
SPG11-212ENST00000558790 LRTOMTQ8WZ04 291 aa7.92□□□□□ -1.14
SPG11-212ENST00000558790 ST8SIA4Q92187 359 aa7.92□□□□□ -1.14
SPG11-212ENST00000558790 SLCO4A1Q96BD0 722 aa7.92□□□□□ -1.14
SPG11-212ENST00000558790 RSRC1Q96IZ7 334 aaKnown RBP7.92□□□□□ -1.14
SPG11-212ENST00000558790 ATP6V1G3Q96LB4 118 aa7.92□□□□□ -1.14
SPG11-212ENST00000558790 C8orf49Q96NF6 230 aa7.92□□□□□ -1.14
SPG11-212ENST00000558790 ATF6BQ99941 703 aa7.92□□□□□ -1.14
SPG11-212ENST00000558790 DPAGT1Q9H3H5 408 aa7.92□□□□□ -1.14
SPG11-212ENST00000558790 C16orf95Q9H693 158 aa7.92□□□□□ -1.14
SPG11-212ENST00000558790 PNRC2Q9NPJ4 139 aaKnown RBP7.92□□□□□ -1.14
SPG11-212ENST00000558790 TMEM140Q9NV12 185 aa7.92□□□□□ -1.14
SPG11-212ENST00000558790 DUX4Q9UBX2 424 aa7.92□□□□□ -1.14
SPG11-212ENST00000558790 TMEM5Q9Y2B1 443 aa7.92□□□□□ -1.14
SPG11-212ENST00000558790 IER3IP1Q9Y5U9 82 aa7.92□□□□□ -1.14
SPG11-212ENST00000558790 IGHV3OR15-7A0A075B7D8 119 aa7.91□□□□□ -1.14
SPG11-212ENST00000558790 TRAV38-1A0A0B4J264 116 aa7.91□□□□□ -1.14
SPG11-212ENST00000558790 ZNF816-ZNF321PA0A0X1KG74 233 aa7.91□□□□□ -1.14
SPG11-212ENST00000558790 DVL1O14640 695 aa7.91□□□□□ -1.14
SPG11-212ENST00000558790 PIN1P1O15428 100 aa7.91□□□□□ -1.14
SPG11-212ENST00000558790 EDF1O60869 148 aaKnown RBP7.91□□□□□ -1.14
SPG11-212ENST00000558790 PTP4A3O75365 173 aa7.91□□□□□ -1.14
SPG11-212ENST00000558790 TSPAN9O75954 239 aa7.91□□□□□ -1.14
SPG11-212ENST00000558790 PPP1R3DO95685 299 aa7.91□□□□□ -1.14
SPG11-212ENST00000558790 TXNDC12O95881 172 aa7.91□□□□□ -1.14
SPG11-212ENST00000558790 NPPAP01160 153 aa7.91□□□□□ -1.14
SPG11-212ENST00000558790 LCATP04180 440 aa7.91□□□□□ -1.14
SPG11-212ENST00000558790 FBP1P09467 338 aa7.91□□□□□ -1.14
SPG11-212ENST00000558790 DLX1P56177 255 aa7.91□□□□□ -1.14
SPG11-212ENST00000558790 ELF3P78545 371 aaPredicted RBP7.91□□□□□ -1.14
SPG11-212ENST00000558790 CDONQ4KMG0 1287 aa7.91□□□□□ -1.14
SPG11-212ENST00000558790 IFI44LQ53G44 452 aa7.91□□□□□ -1.14
SPG11-212ENST00000558790 KPRPQ5T749 579 aaPredicted RBP7.91□□□□□ -1.14
SPG11-212ENST00000558790 METTL21CQ5VZV1 264 aa7.91□□□□□ -1.14
SPG11-212ENST00000558790 DNM1P34Q6PK57 102 aa7.91□□□□□ -1.14
SPG11-212ENST00000558790 Q6ZSN1 163 aa7.91□□□□□ -1.14
SPG11-212ENST00000558790 ZNF826PQ6ZT77 177 aa7.91□□□□□ -1.14
SPG11-212ENST00000558790 TSEN54Q7Z6J9 526 aaKnown RBP7.91□□□□□ -1.14
SPG11-212ENST00000558790 GCSAMQ8N6F7 178 aa7.91□□□□□ -1.14
SPG11-212ENST00000558790 OR2AE1Q8NHA4 323 aa7.91□□□□□ -1.14
SPG11-212ENST00000558790 FANK1Q8TC84 345 aa7.91□□□□□ -1.14
SPG11-212ENST00000558790 CLPTM1LQ96KA5 538 aa7.91□□□□□ -1.14
SPG11-212ENST00000558790 PITX2Q99697 317 aa7.91□□□□□ -1.14
SPG11-212ENST00000558790 SIKE1Q9BRV8 207 aa7.91□□□□□ -1.14
SPG11-212ENST00000558790 TMEM120AQ9BXJ8 343 aa7.91□□□□□ -1.14
SPG11-212ENST00000558790 FN3KQ9H479 309 aa7.91□□□□□ -1.14
SPG11-212ENST00000558790 ANKRD19PQ9H560 264 aa7.91□□□□□ -1.14
SPG11-212ENST00000558790 TRIM36Q9NQ86 728 aa7.91□□□□□ -1.14
SPG11-212ENST00000558790 SIRT7Q9NRC8 400 aa7.91□□□□□ -1.14
SPG11-212ENST00000558790 INTS9Q9NV88 658 aaKnown RBP7.91□□□□□ -1.14
SPG11-212ENST00000558790 C1orf123Q9NWV4 160 aa7.91□□□□□ -1.14
SPG11-212ENST00000558790 ONECUT1Q9UBC0 465 aa7.91□□□□□ -1.14
SPG11-212ENST00000558790 RPUSD1Q9UJJ7 312 aaKnown RBP7.91□□□□□ -1.14
SPG11-212ENST00000558790 KPTNQ9Y664 436 aa7.91□□□□□ -1.14
SPG11-212ENST00000558790 A0A1B0GVI7 797 aa7.9□□□□□ -1.14
SPG11-212ENST00000558790 hCG_1807616A0A1W2PRN6 198 aa7.9□□□□□ -1.14
SPG11-212ENST00000558790 BTBD17A6NE02 478 aa7.9□□□□□ -1.14
SPG11-212ENST00000558790 A6NLC8 198 aa7.9□□□□□ -1.14
SPG11-212ENST00000558790 CD300LBA8K4G0 201 aa7.9□□□□□ -1.14
SPG11-212ENST00000558790 M0R135 149 aa7.9□□□□□ -1.14
SPG11-212ENST00000558790 OPN1MWP04001 364 aa7.9□□□□□ -1.14
SPG11-212ENST00000558790 OPN1MW2P0DN77 364 aa7.9□□□□□ -1.14
SPG11-212ENST00000558790 OPN1MW3P0DN78 364 aa7.9□□□□□ -1.14
SPG11-212ENST00000558790 CRABP1P29762 137 aa7.9□□□□□ -1.14
SPG11-212ENST00000558790 GGT2P36268 569 aa7.9□□□□□ -1.14
SPG11-212ENST00000558790 MDH1P40925 334 aaKnown RBP7.9□□□□□ -1.14
SPG11-212ENST00000558790 OMPP47874 163 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms