RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 ACP7Q6ZNF0 438 aa2.26□□□□□ -2.05
TRAV28-201ENST00000557548 RTL4Q6ZR62 310 aa2.26□□□□□ -2.05
TRAV28-201ENST00000557548 MRPL55Q7Z7F7 128 aaKnown RBP2.26□□□□□ -2.05
TRAV28-201ENST00000557548 UNC93AQ86WB7 457 aa2.26□□□□□ -2.05
TRAV28-201ENST00000557548 C10orf67Q8IYJ2 551 aa2.26□□□□□ -2.05
TRAV28-201ENST00000557548 FAM71AQ8IYT1 594 aa2.26□□□□□ -2.05
TRAV28-201ENST00000557548 GPD1LQ8N335 351 aa2.26□□□□□ -2.05
TRAV28-201ENST00000557548 MREGQ8N565 214 aa2.26□□□□□ -2.05
TRAV28-201ENST00000557548 CDRT4Q8N9R6 151 aa2.26□□□□□ -2.05
TRAV28-201ENST00000557548 C20orf203Q8NBC4 194 aa2.26□□□□□ -2.05
TRAV28-201ENST00000557548 ZNF485Q8NCK3 441 aa2.26□□□□□ -2.05
TRAV28-201ENST00000557548 CCDC54Q8NEL0 328 aa2.26□□□□□ -2.05
TRAV28-201ENST00000557548 OR52E2Q8NGJ4 325 aa2.26□□□□□ -2.05
TRAV28-201ENST00000557548 OR10G9Q8NGN4 311 aa2.26□□□□□ -2.05
TRAV28-201ENST00000557548 OR5AR1Q8NGP9 310 aa2.26□□□□□ -2.05
TRAV28-201ENST00000557548 OR6Q1Q8NGQ2 317 aa2.26□□□□□ -2.05
TRAV28-201ENST00000557548 LRRC29Q8WV35 223 aa2.26□□□□□ -2.05
TRAV28-201ENST00000557548 DYDC1Q8WWB3 177 aa2.26□□□□□ -2.05
TRAV28-201ENST00000557548 DNAJB3Q8WWF6 145 aa2.26□□□□□ -2.05
TRAV28-201ENST00000557548 LRRC58Q96CX6 371 aa2.26□□□□□ -2.05
TRAV28-201ENST00000557548 DNAJC19Q96DA6 116 aa2.26□□□□□ -2.05
TRAV28-201ENST00000557548 AURKBQ96GD4 344 aaPredicted RBP2.26□□□□□ -2.05
TRAV28-201ENST00000557548 TMEM101Q96IK0 257 aa2.26□□□□□ -2.05
TRAV28-201ENST00000557548 PPP1R36Q96LQ0 422 aa2.26□□□□□ -2.05
TRAV28-201ENST00000557548 RNF145Q96MT1 663 aa2.26□□□□□ -2.05
TRAV28-201ENST00000557548 SCGB3A2Q96PL1 93 aa2.26□□□□□ -2.05
TRAV28-201ENST00000557548 NRIP2Q9BQI9 281 aa2.26□□□□□ -2.05
TRAV28-201ENST00000557548 UTP23Q9BRU9 249 aaKnown RBP2.26□□□□□ -2.05
TRAV28-201ENST00000557548 COPS4Q9BT78 406 aa2.26□□□□□ -2.05
TRAV28-201ENST00000557548 CALN1Q9BXU9 219 aa2.26□□□□□ -2.05
TRAV28-201ENST00000557548 C6orf62Q9GZU0 229 aaPredicted RBP2.26□□□□□ -2.05
TRAV28-201ENST00000557548 ARMC7Q9H6L4 198 aa2.26□□□□□ -2.05
TRAV28-201ENST00000557548 HRASLSQ9HDD0 168 aa2.26□□□□□ -2.05
TRAV28-201ENST00000557548 SLC22A13Q9Y226 551 aa2.26□□□□□ -2.05
TRAV28-201ENST00000557548 TRAPPC4Q9Y296 219 aa2.26□□□□□ -2.05
TRAV28-201ENST00000557548 TBL2Q9Y4P3 447 aaKnown RBP2.26□□□□□ -2.05
TRAV28-201ENST00000557548 KCNE3Q9Y6H6 103 aa2.26□□□□□ -2.05
TRAV28-201ENST00000557548 KIAA0556O60303 1618 aa2.26□□□□□ -2.05
TRAV28-201ENST00000557548 COL22A1Q8NFW1 1626 aaPredicted RBP2.26□□□□□ -2.05
TRAV28-201ENST00000557548 MADDQ8WXG6 1647 aa2.26□□□□□ -2.05
TRAV28-201ENST00000557548 GLI2P10070 1586 aa2.26□□□□□ -2.05
TRAV28-201ENST00000557548 RAI1Q7Z5J4 1906 aaPredicted RBP2.26□□□□□ -2.05
TRAV28-201ENST00000557548 ABCC10Q5T3U5 1492 aa2.26□□□□□ -2.05
TRAV28-201ENST00000557548 NCOA3Q9Y6Q9 1424 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 SUPT6HQ7KZ85 1726 aaKnown RBP2.25□□□□□ -2.05
TRAV28-201ENST00000557548 CDC42BPBQ9Y5S2 1711 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 TNRQ92752 1358 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 PLEKHG1Q9ULL1 1385 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 ELP1O95163 1332 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 IQGAP2Q13576 1575 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 LOC105371267A0A1B0GV96 52 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 HACD1B0YJ81 288 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 H7C1H1 209 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 M0QXV9 152 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 M0R036 132 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 SULT1C2O00338 296 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 PEX7O00628 323 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 XKRYO14609 159 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 SLC16A4O15374 487 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 SGCEO43556 437 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 RCBTB2O95199 551 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 ACTL6AO96019 429 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 HPRT1P00492 218 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 IFNA5P01569 189 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 APOEP02649 317 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 HMGN1P05114 100 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 GP1BAP07359 652 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 RHOCP08134 193 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 RPS17P08708 135 aaKnown RBP2.25□□□□□ -2.05
TRAV28-201ENST00000557548 GNAO1P09471 354 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 OR4E1P0C645 316 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 HSPD1P10809 573 aaKnown RBP2.25□□□□□ -2.05
TRAV28-201ENST00000557548 TDGF1P13385 188 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 NQO1P15559 274 aaKnown RBP2.25□□□□□ -2.05
TRAV28-201ENST00000557548 ZNF30P17039 623 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 TCP1P17987 556 aaKnown RBP2.25□□□□□ -2.05
TRAV28-201ENST00000557548 USF1P22415 310 aaPredicted RBP2.25□□□□□ -2.05
TRAV28-201ENST00000557548 F2RP25116 425 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 G0S2P27469 103 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 PSMB5P28074 263 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 HTR1EP28566 365 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 ALDH3A1P30838 453 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 GTF2H1P32780 548 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 RANBP1P43487 201 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 VEGFCP49767 419 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 RPL14P50914 215 aaKnown RBP2.25□□□□□ -2.05
TRAV28-201ENST00000557548 FABP6P51161 128 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 TDGF1P3P51864 188 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 NKX2-5P52952 324 aaPredicted RBP2.25□□□□□ -2.05
TRAV28-201ENST00000557548 OR2B8PP59922 312 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 KRTAP10-5P60370 271 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 CXCR4P61073 352 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 PAFAH1B2P68402 229 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 MGAT3Q09327 533 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 BNIP2Q12982 314 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 UNC119Q13432 240 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 TFDP2Q14188 446 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 PRPSAP1Q14558 356 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 ZNHIT3Q15649 155 aaPredicted RBP2.25□□□□□ -2.05
TRAV28-201ENST00000557548 GUK1Q16774 197 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms