RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 UGT2B28Q9BY64 529 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 TRIM4Q9C037 500 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 OR51B5Q9H339 312 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 XKR8Q9H6D3 395 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 RPF2Q9H7B2 306 aaKnown RBP2.41□□□□□ -2.02
VRK1-207ENST00000557352 YY1AP1Q9H869 796 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 TPT1P8Q9HAU6 139 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 BCL2L10Q9HD36 194 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 EXOSC3Q9NQT5 275 aaKnown RBP2.41□□□□□ -2.02
VRK1-207ENST00000557352 POLE3Q9NRF9 147 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 AGPAT4Q9NRZ5 378 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 STARD5Q9NSY2 213 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 DCAF13Q9NV06 445 aaKnown RBP2.41□□□□□ -2.02
VRK1-207ENST00000557352 HRASLS2Q9NWW9 162 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 ADA2Q9NZK5 511 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 CNOT2Q9NZN8 540 aaKnown RBP2.41□□□□□ -2.02
VRK1-207ENST00000557352 RIMS3Q9UJD0 308 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 SAMD4AQ9UPU9 718 aaKnown RBP2.41□□□□□ -2.02
VRK1-207ENST00000557352 MRPS33Q9Y291 106 aaKnown RBP2.41□□□□□ -2.02
VRK1-207ENST00000557352 MMACHCQ9Y4U1 282 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 LRRC42Q9Y546 428 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 U3KQA8 63 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 SPACA6W5XKT8 324 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 PIEZO1Q92508 2521 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 DMXL1Q9Y485 3027 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 DSPPQ9NZW4 1301 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 MYO15AQ9UKN7 3530 aa2.4□□□□□ -2.02
VRK1-207ENST00000557352 SVILO95425 2214 aa2.4□□□□□ -2.03
VRK1-207ENST00000557352 MAP1BP46821 2468 aaKnown RBP2.4□□□□□ -2.03
VRK1-207ENST00000557352 IGLV3-12A0A075B6K2 115 aa2.4□□□□□ -2.03
VRK1-207ENST00000557352 ARRDC5A6NEK1 342 aa2.4□□□□□ -2.03
VRK1-207ENST00000557352 A8MUI8 341 aa2.4□□□□□ -2.03
VRK1-207ENST00000557352 TMX2-CTNND1H3BSU7 103 aa2.4□□□□□ -2.03
VRK1-207ENST00000557352 CXCR6O00574 342 aa2.4□□□□□ -2.03
VRK1-207ENST00000557352 CASC3O15234 703 aaKnown RBP2.4□□□□□ -2.03
VRK1-207ENST00000557352 ANP32DO95626 131 aa2.4□□□□□ -2.03
VRK1-207ENST00000557352 GPR75O95800 540 aa2.4□□□□□ -2.03
VRK1-207ENST00000557352 AIFM1O95831 613 aa2.4□□□□□ -2.03
VRK1-207ENST00000557352 IFNA14P01570 189 aa2.4□□□□□ -2.03
VRK1-207ENST00000557352 HBQ1P09105 142 aa2.4□□□□□ -2.03
VRK1-207ENST00000557352 RNH1P13489 461 aaKnown RBP2.4□□□□□ -2.03
VRK1-207ENST00000557352 CPMP14384 443 aa2.4□□□□□ -2.03
VRK1-207ENST00000557352 CSNK2A2P19784 350 aaPredicted RBP2.4□□□□□ -2.03
VRK1-207ENST00000557352 ATP6V1B2P21281 511 aa2.4□□□□□ -2.03
VRK1-207ENST00000557352 CD1CP29017 333 aa2.4□□□□□ -2.03
VRK1-207ENST00000557352 LCN1P31025 176 aa2.4□□□□□ -2.03
VRK1-207ENST00000557352 KDELR2P33947 212 aa2.4□□□□□ -2.03
VRK1-207ENST00000557352 MAP3K8P41279 467 aa2.4□□□□□ -2.03
VRK1-207ENST00000557352 CDKN2CP42773 168 aa2.4□□□□□ -2.03
VRK1-207ENST00000557352 POU3F4P49335 361 aa2.4□□□□□ -2.03
VRK1-207ENST00000557352 DHPSP49366 369 aaPredicted RBP2.4□□□□□ -2.03
VRK1-207ENST00000557352 EMDP50402 254 aa2.4□□□□□ -2.03
VRK1-207ENST00000557352 PLA2G16P53816 162 aa2.4□□□□□ -2.03
VRK1-207ENST00000557352 LIM2P55344 173 aa2.4□□□□□ -2.03
VRK1-207ENST00000557352 HSD17B7P56937 341 aa2.4□□□□□ -2.03
VRK1-207ENST00000557352 OR4D2P58180 307 aa2.4□□□□□ -2.03
VRK1-207ENST00000557352 MTPNP58546 118 aa2.4□□□□□ -2.03
VRK1-207ENST00000557352 MRPS22P82650 360 aaKnown RBP2.4□□□□□ -2.03
VRK1-207ENST00000557352 CSTF1Q05048 431 aaKnown RBP2.4□□□□□ -2.03
VRK1-207ENST00000557352 C2orf80Q0P641 193 aa2.4□□□□□ -2.03
VRK1-207ENST00000557352 SLAMF1Q13291 335 aa2.4□□□□□ -2.03
VRK1-207ENST00000557352 SELPLGQ14242 412 aa2.4□□□□□ -2.03
VRK1-207ENST00000557352 ANGPT1Q15389 498 aa2.4□□□□□ -2.03
VRK1-207ENST00000557352 ATP6AP1Q15904 470 aa2.4□□□□□ -2.03
VRK1-207ENST00000557352 CYP51A1Q16850 503 aa2.4□□□□□ -2.03
VRK1-207ENST00000557352 ZSWIM7Q19AV6 140 aa2.4□□□□□ -2.03
VRK1-207ENST00000557352 DEFB133Q30KQ1 61 aa2.4□□□□□ -2.03
VRK1-207ENST00000557352 RFX4Q33E94 735 aa2.4□□□□□ -2.03
VRK1-207ENST00000557352 GLYATQ6IB77 296 aa2.4□□□□□ -2.03
VRK1-207ENST00000557352 REEP3Q6NUK4 255 aa2.4□□□□□ -2.03
VRK1-207ENST00000557352 LRRC74BQ6ZQY2 392 aa2.4□□□□□ -2.03
VRK1-207ENST00000557352 EIF3MQ7L2H7 374 aaKnown RBP2.4□□□□□ -2.03
VRK1-207ENST00000557352 ZGRF1Q86YA3 2104 aa2.4□□□□□ -2.03
VRK1-207ENST00000557352 MED12LQ86YW9 2145 aa2.4□□□□□ -2.03
VRK1-207ENST00000557352 ST13P4Q8IZP2 240 aaPredicted RBP2.4□□□□□ -2.03
VRK1-207ENST00000557352 OR2L13Q8N349 312 aa2.4□□□□□ -2.03
VRK1-207ENST00000557352 LRRC25Q8N386 305 aaPredicted RBP2.4□□□□□ -2.03
VRK1-207ENST00000557352 SVOPLQ8N434 492 aa2.4□□□□□ -2.03
VRK1-207ENST00000557352 RNF148Q8N7C7 305 aa2.4□□□□□ -2.03
VRK1-207ENST00000557352 ANKFN1Q8N957 763 aa2.4□□□□□ -2.03
VRK1-207ENST00000557352 FAM71CQ8NEG0 241 aa2.4□□□□□ -2.03
VRK1-207ENST00000557352 OR4K14Q8NGD5 310 aa2.4□□□□□ -2.03
VRK1-207ENST00000557352 OR4A15Q8NGL6 344 aa2.4□□□□□ -2.03
VRK1-207ENST00000557352 OR10A6Q8NH74 314 aa2.4□□□□□ -2.03
VRK1-207ENST00000557352 CLHC1Q8NHS4 586 aa2.4□□□□□ -2.03
VRK1-207ENST00000557352 FBXO30Q8TB52 745 aa2.4□□□□□ -2.03
VRK1-207ENST00000557352 GIPC3Q8TF64 312 aa2.4□□□□□ -2.03
VRK1-207ENST00000557352 CANT1Q8WVQ1 401 aa2.4□□□□□ -2.03
VRK1-207ENST00000557352 DNAJC9Q8WXX5 260 aa2.4□□□□□ -2.03
VRK1-207ENST00000557352 CCDC124Q96CT7 223 aaKnown RBP2.4□□□□□ -2.03
VRK1-207ENST00000557352 C14orf79Q96F83 325 aa2.4□□□□□ -2.03
VRK1-207ENST00000557352 CENPNQ96H22 339 aaPredicted RBP2.4□□□□□ -2.03
VRK1-207ENST00000557352 MS4A4EQ96PG1 132 aa2.4□□□□□ -2.03
VRK1-207ENST00000557352 STACQ99469 402 aa2.4□□□□□ -2.03
VRK1-207ENST00000557352 SLC39A3Q9BRY0 314 aa2.4□□□□□ -2.03
VRK1-207ENST00000557352 SLC35A5Q9BS91 424 aa2.4□□□□□ -2.03
VRK1-207ENST00000557352 TM2D1Q9BX74 207 aa2.4□□□□□ -2.03
VRK1-207ENST00000557352 POLR2J2Q9GZM3 115 aaKnown RBP2.4□□□□□ -2.03
VRK1-207ENST00000557352 POLR2J3Q9H1A7 115 aaKnown RBP2.4□□□□□ -2.03
VRK1-207ENST00000557352 VCXQ9H320 206 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 570.1 ms