RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 UBAP1Q9NZ09 502 aa10.51□□□□□ -0.73
SLIRP-209ENST00000557342 NKX1-2Q9UD57 310 aaPredicted RBP10.51□□□□□ -0.73
SLIRP-209ENST00000557342 OR52A1Q9UKL2 312 aa10.51□□□□□ -0.73
SLIRP-209ENST00000557342 GTF2A1LQ9UNN4 478 aa10.51□□□□□ -0.73
SLIRP-209ENST00000557342 DOCK11Q5JSL3 2073 aa10.51□□□□□ -0.73
SLIRP-209ENST00000557342 PPIAL4EA0A075B759 164 aa10.5□□□□□ -0.73
SLIRP-209ENST00000557342 TRAV20A0A0B4J274 112 aa10.5□□□□□ -0.73
SLIRP-209ENST00000557342 IGHV3-64DA0A0J9YX35 117 aa10.5□□□□□ -0.73
SLIRP-209ENST00000557342 ZNF816-ZNF321PA0A0X1KG74 233 aa10.5□□□□□ -0.73
SLIRP-209ENST00000557342 DAPL1A0PJW8 107 aa10.5□□□□□ -0.73
SLIRP-209ENST00000557342 PPIAL4DF5H284 164 aa10.5□□□□□ -0.73
SLIRP-209ENST00000557342 CASQ2O14958 399 aaPredicted RBP10.5□□□□□ -0.73
SLIRP-209ENST00000557342 MAGEB4O15481 346 aaPredicted RBP10.5□□□□□ -0.73
SLIRP-209ENST00000557342 FAM20BO75063 409 aa10.5□□□□□ -0.73
SLIRP-209ENST00000557342 RPP14O95059 124 aaKnown RBP10.5□□□□□ -0.73
SLIRP-209ENST00000557342 PNPP00491 289 aa10.5□□□□□ -0.73
SLIRP-209ENST00000557342 IGLV3-1P01715 115 aa10.5□□□□□ -0.73
SLIRP-209ENST00000557342 TTRP02766 147 aa10.5□□□□□ -0.73
SLIRP-209ENST00000557342 GRPP07492 148 aa10.5□□□□□ -0.73
SLIRP-209ENST00000557342 PPIAL4FP0DN26 164 aa10.5□□□□□ -0.73
SLIRP-209ENST00000557342 ACKR3P25106 362 aa10.5□□□□□ -0.73
SLIRP-209ENST00000557342 PEX2P28328 305 aa10.5□□□□□ -0.73
SLIRP-209ENST00000557342 PMELP40967 661 aa10.5□□□□□ -0.73
SLIRP-209ENST00000557342 MFGE8Q08431 387 aaPredicted RBP10.5□□□□□ -0.73
SLIRP-209ENST00000557342 RIPPLY1Q0D2K3 151 aa10.5□□□□□ -0.73
SLIRP-209ENST00000557342 ZMYND11Q15326 602 aa10.5□□□□□ -0.73
SLIRP-209ENST00000557342 MPPED2Q15777 294 aa10.5□□□□□ -0.73
SLIRP-209ENST00000557342 LIPNQ5VXI9 398 aa10.5□□□□□ -0.73
SLIRP-209ENST00000557342 LPCAT4Q643R3 524 aa10.5□□□□□ -0.73
SLIRP-209ENST00000557342 KCTD20Q7Z5Y7 419 aa10.5□□□□□ -0.73
SLIRP-209ENST00000557342 THAP5Q7Z6K1 395 aa10.5□□□□□ -0.73
SLIRP-209ENST00000557342 ELMOD2Q8IZ81 293 aa10.5□□□□□ -0.73
SLIRP-209ENST00000557342 SEMA6DQ8NFY4 1073 aa10.5□□□□□ -0.73
SLIRP-209ENST00000557342 OR51E1Q8TCB6 317 aa10.5□□□□□ -0.73
SLIRP-209ENST00000557342 PIGCQ92535 297 aa10.5□□□□□ -0.73
SLIRP-209ENST00000557342 DVL3Q92997 716 aaPredicted RBP10.5□□□□□ -0.73
SLIRP-209ENST00000557342 TMEM186Q96B77 213 aa10.5□□□□□ -0.73
SLIRP-209ENST00000557342 HIST1H2AAQ96QV6 131 aa10.5□□□□□ -0.73
SLIRP-209ENST00000557342 RTL8AQ9BWD3 113 aa10.5□□□□□ -0.73
SLIRP-209ENST00000557342 BEX2Q9BXY8 128 aa10.5□□□□□ -0.73
SLIRP-209ENST00000557342 VCXQ9H320 206 aa10.5□□□□□ -0.73
SLIRP-209ENST00000557342 PATZ1Q9HBE1 687 aaKnown RBP10.5□□□□□ -0.73
SLIRP-209ENST00000557342 TRIM36Q9NQ86 728 aa10.5□□□□□ -0.73
SLIRP-209ENST00000557342 G6PC2Q9NQR9 355 aa10.5□□□□□ -0.73
SLIRP-209ENST00000557342 GPR84Q9NQS5 396 aa10.5□□□□□ -0.73
SLIRP-209ENST00000557342 RNF7Q9UBF6 113 aa10.5□□□□□ -0.73
SLIRP-209ENST00000557342 EXOGQ9Y2C4 368 aaKnown RBP10.5□□□□□ -0.73
SLIRP-209ENST00000557342 RHBDD3Q9Y3P4 386 aa10.5□□□□□ -0.73
SLIRP-209ENST00000557342 RPL36Q9Y3U8 105 aaKnown RBP10.5□□□□□ -0.73
SLIRP-209ENST00000557342 PPIAL4AQ9Y536 164 aa10.5□□□□□ -0.73
SLIRP-209ENST00000557342 ZANQ9Y493 2812 aa10.49□□□□□ -0.73
SLIRP-209ENST00000557342 A6NLC8 198 aa10.49□□□□□ -0.73
SLIRP-209ENST00000557342 TMEM210A6NLX4 147 aa10.49□□□□□ -0.73
SLIRP-209ENST00000557342 ZNF850A8MQ14 1090 aa10.49□□□□□ -0.73
SLIRP-209ENST00000557342 J3QRE1 110 aa10.49□□□□□ -0.73
SLIRP-209ENST00000557342 DLGAP1O14490 977 aa10.49□□□□□ -0.73
SLIRP-209ENST00000557342 FOXH1O75593 365 aa10.49□□□□□ -0.73
SLIRP-209ENST00000557342 DHRS3O75911 302 aa10.49□□□□□ -0.73
SLIRP-209ENST00000557342 DBTP11182 482 aaKnown RBP10.49□□□□□ -0.73
SLIRP-209ENST00000557342 ZNF85Q03923 595 aa10.49□□□□□ -0.73
SLIRP-209ENST00000557342 ZNF91Q05481 1191 aa10.49□□□□□ -0.73
SLIRP-209ENST00000557342 PRDX4Q13162 271 aa10.49□□□□□ -0.73
SLIRP-209ENST00000557342 KCNJ8Q15842 424 aa10.49□□□□□ -0.73
SLIRP-209ENST00000557342 ZNF684Q5T5D7 378 aa10.49□□□□□ -0.73
SLIRP-209ENST00000557342 OGFRL1Q5TC84 451 aaPredicted RBP10.49□□□□□ -0.73
SLIRP-209ENST00000557342 KRT74Q7RTS7 529 aa10.49□□□□□ -0.73
SLIRP-209ENST00000557342 ZDHHC23Q8IYP9 409 aa10.49□□□□□ -0.73
SLIRP-209ENST00000557342 DHRSXQ8N5I4 330 aa10.49□□□□□ -0.73
SLIRP-209ENST00000557342 ACBD7Q8N6N7 88 aa10.49□□□□□ -0.73
SLIRP-209ENST00000557342 SETD9Q8NE22 299 aa10.49□□□□□ -0.73
SLIRP-209ENST00000557342 FAM71F1Q96KD3 344 aaPredicted RBP10.49□□□□□ -0.73
SLIRP-209ENST00000557342 LPAR2Q9HBW0 351 aa10.49□□□□□ -0.73
SLIRP-209ENST00000557342 HIF1ANQ9NWT6 349 aa10.49□□□□□ -0.73
SLIRP-209ENST00000557342 C1orf123Q9NWV4 160 aa10.49□□□□□ -0.73
SLIRP-209ENST00000557342 MIOXQ9UGB7 285 aa10.49□□□□□ -0.73
SLIRP-209ENST00000557342 GNG8Q9UK08 70 aa10.49□□□□□ -0.73
SLIRP-209ENST00000557342 TLN2Q9Y4G6 2542 aa10.49□□□□□ -0.73
SLIRP-209ENST00000557342 FN1P02751 2386 aaKnown RBP10.48□□□□□ -0.73
SLIRP-209ENST00000557342 hCG_1807616A0A1W2PRN6 198 aa10.48□□□□□ -0.73
SLIRP-209ENST00000557342 DHRS7CA6NNS2 312 aa10.48□□□□□ -0.73
SLIRP-209ENST00000557342 PLPP2O43688 288 aa10.48□□□□□ -0.73
SLIRP-209ENST00000557342 FADS2O95864 444 aaKnown RBP10.48□□□□□ -0.73
SLIRP-209ENST00000557342 ACTA2P62736 377 aa10.48□□□□□ -0.73
SLIRP-209ENST00000557342 ACTG2P63267 376 aa10.48□□□□□ -0.73
SLIRP-209ENST00000557342 RAB40BQ12829 278 aa10.48□□□□□ -0.73
SLIRP-209ENST00000557342 HNRNPA0Q13151 305 aaKnown RBP10.48□□□□□ -0.73
SLIRP-209ENST00000557342 IL18R1Q13478 541 aa10.48□□□□□ -0.73
SLIRP-209ENST00000557342 CR1LQ2VPA4 569 aa10.48□□□□□ -0.73
SLIRP-209ENST00000557342 ZNF404Q494X3 552 aa10.48□□□□□ -0.73
SLIRP-209ENST00000557342 CDONQ4KMG0 1287 aa10.48□□□□□ -0.73
SLIRP-209ENST00000557342 TP53I3Q53FA7 332 aa10.48□□□□□ -0.73
SLIRP-209ENST00000557342 KLHL22Q53GT1 634 aa10.48□□□□□ -0.73
SLIRP-209ENST00000557342 FAM120AOSQ5T036 256 aa10.48□□□□□ -0.73
SLIRP-209ENST00000557342 ZNF691Q5VV52 312 aa10.48□□□□□ -0.73
SLIRP-209ENST00000557342 DOK3Q7L591 496 aa10.48□□□□□ -0.73
SLIRP-209ENST00000557342 CATSPERDQ86XM0 798 aa10.48□□□□□ -0.73
SLIRP-209ENST00000557342 EGFL6Q8IUX8 553 aa10.48□□□□□ -0.73
SLIRP-209ENST00000557342 CCDC54Q8NEL0 328 aa10.48□□□□□ -0.73
SLIRP-209ENST00000557342 OR1M1Q8NGA1 313 aa10.48□□□□□ -0.73
SLIRP-209ENST00000557342 CYGBQ8WWM9 190 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms