RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 RPUSD1Q9UJJ7 312 aaKnown RBP13.13□□□□□ -0.31
TUBB3-213ENST00000557262 FAM183AA6NL82 134 aa13.12□□□□□ -0.31
TUBB3-213ENST00000557262 GLCEO94923 617 aa13.12□□□□□ -0.31
TUBB3-213ENST00000557262 GSK3AP49840 483 aa13.12□□□□□ -0.31
TUBB3-213ENST00000557262 ZNF121P58317 390 aaPredicted RBP13.12□□□□□ -0.31
TUBB3-213ENST00000557262 RPL15P61313 204 aaKnown RBP13.12□□□□□ -0.31
TUBB3-213ENST00000557262 GK3PQ14409 553 aa13.12□□□□□ -0.31
TUBB3-213ENST00000557262 SNCBQ16143 134 aa13.12□□□□□ -0.31
TUBB3-213ENST00000557262 OLFML2AQ68BL7 652 aa13.12□□□□□ -0.31
TUBB3-213ENST00000557262 WDR82Q6UXN9 313 aa13.12□□□□□ -0.31
TUBB3-213ENST00000557262 C17orf107Q6ZR85 190 aa13.12□□□□□ -0.31
TUBB3-213ENST00000557262 SLC36A1Q7Z2H8 476 aa13.12□□□□□ -0.31
TUBB3-213ENST00000557262 CSNK2A3Q8NEV1 391 aa13.12□□□□□ -0.31
TUBB3-213ENST00000557262 TEX47Q8TBZ9 253 aa13.12□□□□□ -0.31
TUBB3-213ENST00000557262 ST8SIA4Q92187 359 aa13.12□□□□□ -0.31
TUBB3-213ENST00000557262 OTULINQ96BN8 352 aa13.12□□□□□ -0.31
TUBB3-213ENST00000557262 DMRTB1Q96MA1 342 aa13.12□□□□□ -0.31
TUBB3-213ENST00000557262 CCL13Q99616 98 aa13.12□□□□□ -0.31
TUBB3-213ENST00000557262 NIPSNAP1Q9BPW8 284 aa13.12□□□□□ -0.31
TUBB3-213ENST00000557262 OR10A2Q9H208 303 aa13.12□□□□□ -0.31
TUBB3-213ENST00000557262 ZNF319Q9P2F9 582 aa13.12□□□□□ -0.31
TUBB3-213ENST00000557262 RHBDD3Q9Y3P4 386 aa13.12□□□□□ -0.31
TUBB3-213ENST00000557262 KPTNQ9Y664 436 aa13.12□□□□□ -0.31
TUBB3-213ENST00000557262 hCG_38984A0A1B0GV85 526 aa13.11□□□□□ -0.31
TUBB3-213ENST00000557262 CLPSL1A2RUU4 121 aa13.11□□□□□ -0.31
TUBB3-213ENST00000557262 GPR37O15354 613 aa13.11□□□□□ -0.31
TUBB3-213ENST00000557262 H2BFMP0C1H6 154 aa13.11□□□□□ -0.31
TUBB3-213ENST00000557262 GNALP38405 381 aa13.11□□□□□ -0.31
TUBB3-213ENST00000557262 OPRL1P41146 370 aa13.11□□□□□ -0.31
TUBB3-213ENST00000557262 RELBQ01201 579 aa13.11□□□□□ -0.31
TUBB3-213ENST00000557262 CDONQ4KMG0 1287 aa13.11□□□□□ -0.31
TUBB3-213ENST00000557262 KLHL12Q53G59 568 aa13.11□□□□□ -0.31
TUBB3-213ENST00000557262 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.11□□□□□ -0.31
TUBB3-213ENST00000557262 GALNT4Q8N4A0 578 aa13.11□□□□□ -0.31
TUBB3-213ENST00000557262 SCCPDHQ8NBX0 429 aa13.11□□□□□ -0.31
TUBB3-213ENST00000557262 LY6G5BQ8NDX9 201 aa13.11□□□□□ -0.31
TUBB3-213ENST00000557262 OR10G2Q8NGC3 310 aa13.11□□□□□ -0.31
TUBB3-213ENST00000557262 GIPC3Q8TF64 312 aa13.11□□□□□ -0.31
TUBB3-213ENST00000557262 DYRK2Q92630 601 aa13.11□□□□□ -0.31
TUBB3-213ENST00000557262 C12orf43Q96C57 262 aaKnown RBP13.11□□□□□ -0.31
TUBB3-213ENST00000557262 PGAM5Q96HS1 289 aa13.11□□□□□ -0.31
TUBB3-213ENST00000557262 FEVQ99581 238 aa13.11□□□□□ -0.31
TUBB3-213ENST00000557262 MICU1Q9BPX6 476 aa13.11□□□□□ -0.31
TUBB3-213ENST00000557262 RGCCQ9H4X1 137 aa13.11□□□□□ -0.31
TUBB3-213ENST00000557262 PPP1R3EQ9H7J1 279 aa13.11□□□□□ -0.31
TUBB3-213ENST00000557262 BRD7Q9NPI1 651 aa13.11□□□□□ -0.31
TUBB3-213ENST00000557262 DNAJC27Q9NZQ0 273 aa13.11□□□□□ -0.31
TUBB3-213ENST00000557262 A0A1B0GVI7 797 aa13.1□□□□□ -0.31
TUBB3-213ENST00000557262 ANXA2P2A6NMY6 339 aa13.1□□□□□ -0.31
TUBB3-213ENST00000557262 H3BN98 237 aa13.1□□□□□ -0.31
TUBB3-213ENST00000557262 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.1□□□□□ -0.31
TUBB3-213ENST00000557262 CDIPTO14735 213 aa13.1□□□□□ -0.31
TUBB3-213ENST00000557262 NDUFB3O43676 98 aa13.1□□□□□ -0.31
TUBB3-213ENST00000557262 RAP2AP10114 183 aa13.1□□□□□ -0.31
TUBB3-213ENST00000557262 PAICSP22234 425 aaKnown RBP13.1□□□□□ -0.31
TUBB3-213ENST00000557262 IER3P46695 156 aa13.1□□□□□ -0.31
TUBB3-213ENST00000557262 TGM4P49221 684 aa13.1□□□□□ -0.31
TUBB3-213ENST00000557262 CSNK2BP67870 215 aa13.1□□□□□ -0.31
TUBB3-213ENST00000557262 ELF3P78545 371 aaPredicted RBP13.1□□□□□ -0.31
TUBB3-213ENST00000557262 IL5RAQ01344 420 aa13.1□□□□□ -0.31
TUBB3-213ENST00000557262 SRSF4Q08170 494 aaKnown RBP13.1□□□□□ -0.31
TUBB3-213ENST00000557262 GFOD2Q3B7J2 385 aa13.1□□□□□ -0.31
TUBB3-213ENST00000557262 WDR38Q5JTN6 314 aa13.1□□□□□ -0.31
TUBB3-213ENST00000557262 ATPAF1Q5TC12 328 aaPredicted RBP13.1□□□□□ -0.31
TUBB3-213ENST00000557262 VMO1Q7Z5L0 202 aa13.1□□□□□ -0.31
TUBB3-213ENST00000557262 TIGD4Q8IY51 512 aa13.1□□□□□ -0.31
TUBB3-213ENST00000557262 FTMTQ8N4E7 242 aa13.1□□□□□ -0.31
TUBB3-213ENST00000557262 IQCF1Q8N6M8 205 aa13.1□□□□□ -0.31
TUBB3-213ENST00000557262 WFDC12Q8WWY7 111 aa13.1□□□□□ -0.31
TUBB3-213ENST00000557262 SEH1LQ96EE3 360 aa13.1□□□□□ -0.31
TUBB3-213ENST00000557262 AMELYQ99218 206 aa13.1□□□□□ -0.31
TUBB3-213ENST00000557262 PAPOLGQ9BWT3 736 aaKnown RBP13.1□□□□□ -0.31
TUBB3-213ENST00000557262 TLNRD1Q9H1K6 362 aa13.1□□□□□ -0.31
TUBB3-213ENST00000557262 OR51V1Q9H2C8 321 aa13.1□□□□□ -0.31
TUBB3-213ENST00000557262 PRPF19Q9UMS4 504 aaKnown RBP13.1□□□□□ -0.31
TUBB3-213ENST00000557262 MPC1Q9Y5U8 109 aa13.1□□□□□ -0.31
TUBB3-213ENST00000557262 CMYA5Q8N3K9 4069 aa13.1□□□□□ -0.31
TUBB3-213ENST00000557262 A0A0U1RQK1 487 aa13.09□□□□□ -0.31
TUBB3-213ENST00000557262 A0A1B0GW55 424 aa13.09□□□□□ -0.31
TUBB3-213ENST00000557262 CST1P01037 141 aa13.09□□□□□ -0.31
TUBB3-213ENST00000557262 DUX4L2P0CJ85 424 aa13.09□□□□□ -0.31
TUBB3-213ENST00000557262 DUX4L3P0CJ86 424 aa13.09□□□□□ -0.31
TUBB3-213ENST00000557262 DUX4L4P0CJ87 422 aa13.09□□□□□ -0.31
TUBB3-213ENST00000557262 DUX4L5P0CJ88 424 aa13.09□□□□□ -0.31
TUBB3-213ENST00000557262 DUX4L6P0CJ89 424 aa13.09□□□□□ -0.31
TUBB3-213ENST00000557262 DUX4L7P0CJ90 424 aa13.09□□□□□ -0.31
TUBB3-213ENST00000557262 OCLNQ16625 522 aa13.09□□□□□ -0.31
TUBB3-213ENST00000557262 DUX4L9Q6RFH8 374 aaPredicted RBP13.09□□□□□ -0.31
TUBB3-213ENST00000557262 LDLRAD3Q86YD5 345 aa13.09□□□□□ -0.31
TUBB3-213ENST00000557262 PDZD9Q8IXQ8 264 aa13.09□□□□□ -0.31
TUBB3-213ENST00000557262 FGFRL1Q8N441 504 aa13.09□□□□□ -0.31
TUBB3-213ENST00000557262 ZNF454Q8N9F8 522 aa13.09□□□□□ -0.31
TUBB3-213ENST00000557262 OR10Z1Q8NGY1 313 aa13.09□□□□□ -0.31
TUBB3-213ENST00000557262 OTOSQ8NHW6 89 aa13.09□□□□□ -0.31
TUBB3-213ENST00000557262 NPRL2Q8WTW4 380 aa13.09□□□□□ -0.31
TUBB3-213ENST00000557262 THEM6Q8WUY1 208 aa13.09□□□□□ -0.31
TUBB3-213ENST00000557262 ITPKCQ96DU7 683 aa13.09□□□□□ -0.31
TUBB3-213ENST00000557262 LRGUKQ96M69 825 aa13.09□□□□□ -0.31
TUBB3-213ENST00000557262 RTL8AQ9BWD3 113 aa13.09□□□□□ -0.31
TUBB3-213ENST00000557262 CHID1Q9BWS9 393 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms