RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 RER1O15258 196 aa10.06□□□□□ -0.8
SRP54-213ENST00000556994 EFNA2O43921 213 aa10.06□□□□□ -0.8
SRP54-213ENST00000556994 SCGNO76038 276 aa10.06□□□□□ -0.8
SRP54-213ENST00000556994 GLAP06280 429 aa10.06□□□□□ -0.8
SRP54-213ENST00000556994 ZNF17P17021 662 aa10.06□□□□□ -0.8
SRP54-213ENST00000556994 EN2P19622 333 aaPredicted RBP10.06□□□□□ -0.8
SRP54-213ENST00000556994 SLC6A9P48067 706 aa10.06□□□□□ -0.8
SRP54-213ENST00000556994 OR1D5P58170 312 aa10.06□□□□□ -0.8
SRP54-213ENST00000556994 ZNF121P58317 390 aaPredicted RBP10.06□□□□□ -0.8
SRP54-213ENST00000556994 SNRPEP62304 92 aaKnown RBP10.06□□□□□ -0.8
SRP54-213ENST00000556994 CSNK2A1P68400 391 aaPredicted RBP10.06□□□□□ -0.8
SRP54-213ENST00000556994 ZP4Q12836 540 aa10.06□□□□□ -0.8
SRP54-213ENST00000556994 FOXF1Q12946 379 aa10.06□□□□□ -0.8
SRP54-213ENST00000556994 PEA15Q15121 130 aa10.06□□□□□ -0.8
SRP54-213ENST00000556994 VAX1Q5SQQ9 334 aa10.06□□□□□ -0.8
SRP54-213ENST00000556994 CLEC9AQ6UXN8 241 aa10.06□□□□□ -0.8
SRP54-213ENST00000556994 C1QL2Q7Z5L3 287 aa10.06□□□□□ -0.8
SRP54-213ENST00000556994 ARRDC1Q8N5I2 433 aa10.06□□□□□ -0.8
SRP54-213ENST00000556994 ZNF441Q8N8Z8 693 aa10.06□□□□□ -0.8
SRP54-213ENST00000556994 CSNK2A3Q8NEV1 391 aa10.06□□□□□ -0.8
SRP54-213ENST00000556994 MFSD8Q8NHS3 518 aa10.06□□□□□ -0.8
SRP54-213ENST00000556994 KCNG3Q8TAE7 436 aa10.06□□□□□ -0.8
SRP54-213ENST00000556994 SFT2D1Q8WV19 159 aa10.06□□□□□ -0.8
SRP54-213ENST00000556994 TMEM234Q8WY98 164 aa10.06□□□□□ -0.8
SRP54-213ENST00000556994 SMIM8Q96KF7 97 aa10.06□□□□□ -0.8
SRP54-213ENST00000556994 AQP10Q96PS8 301 aa10.06□□□□□ -0.8
SRP54-213ENST00000556994 CDC6Q99741 560 aa10.06□□□□□ -0.8
SRP54-213ENST00000556994 SMIM3Q9BZL3 60 aa10.06□□□□□ -0.8
SRP54-213ENST00000556994 NKX2-4Q9H2Z4 354 aa10.06□□□□□ -0.8
SRP54-213ENST00000556994 SERINC1Q9NRX5 453 aa10.06□□□□□ -0.8
SRP54-213ENST00000556994 EHFQ9NZC4 300 aa10.06□□□□□ -0.8
SRP54-213ENST00000556994 E9PLN8 166 aa10.06□□□□□ -0.8
SRP54-213ENST00000556994 GSTP1P09211 210 aaKnown RBP10.06□□□□□ -0.8
SRP54-213ENST00000556994 MYF5P13349 255 aa10.06□□□□□ -0.8
SRP54-213ENST00000556994 FOLR1P15328 257 aa10.06□□□□□ -0.8
SRP54-213ENST00000556994 CBR1P16152 277 aa10.06□□□□□ -0.8
SRP54-213ENST00000556994 FPR2P25090 351 aa10.06□□□□□ -0.8
SRP54-213ENST00000556994 LAP3P28838 519 aa10.06□□□□□ -0.8
SRP54-213ENST00000556994 GSK3AP49840 483 aa10.06□□□□□ -0.8
SRP54-213ENST00000556994 P2RY4P51582 365 aa10.06□□□□□ -0.8
SRP54-213ENST00000556994 CCR5P51681 352 aa10.06□□□□□ -0.8
SRP54-213ENST00000556994 F2RL1P55085 397 aa10.06□□□□□ -0.8
SRP54-213ENST00000556994 SNU13P55769 128 aaKnown RBP10.06□□□□□ -0.8
SRP54-213ENST00000556994 RSPO4Q2I0M5 234 aaPredicted RBP10.06□□□□□ -0.8
SRP54-213ENST00000556994 POC1AQ8NBT0 407 aa10.06□□□□□ -0.8
SRP54-213ENST00000556994 OR51T1Q8NGJ9 327 aa10.06□□□□□ -0.8
SRP54-213ENST00000556994 AKR1E2Q96JD6 320 aa10.06□□□□□ -0.8
SRP54-213ENST00000556994 C2orf50Q96LR7 162 aa10.06□□□□□ -0.8
SRP54-213ENST00000556994 CDCA3Q99618 268 aaPredicted RBP10.06□□□□□ -0.8
SRP54-213ENST00000556994 ASH2LQ9UBL3 628 aa10.06□□□□□ -0.8
SRP54-213ENST00000556994 PMS2P1A4D2B8 440 aa10.05□□□□□ -0.8
SRP54-213ENST00000556994 LILRA5A6NI73 299 aa10.05□□□□□ -0.8
SRP54-213ENST00000556994 COLCA2A8K830 154 aa10.05□□□□□ -0.8
SRP54-213ENST00000556994 NUDT19A8MXV4 375 aa10.05□□□□□ -0.8
SRP54-213ENST00000556994 C10orf142B7Z368 130 aa10.05□□□□□ -0.8
SRP54-213ENST00000556994 EIF3GO75821 320 aaKnown RBP eCLIP10.05□□□□□ -0.8
SRP54-213ENST00000556994 LYL1P12980 280 aa10.05□□□□□ -0.8
SRP54-213ENST00000556994 PTGFRP43088 359 aa10.05□□□□□ -0.8
SRP54-213ENST00000556994 CLRN1P58418 232 aa10.05□□□□□ -0.8
SRP54-213ENST00000556994 RNF4P78317 190 aa10.05□□□□□ -0.8
SRP54-213ENST00000556994 SPEM2Q0P670 501 aa10.05□□□□□ -0.8
SRP54-213ENST00000556994 SWI5Q1ZZU3 235 aa10.05□□□□□ -0.8
SRP54-213ENST00000556994 DHRS11Q6UWP2 260 aa10.05□□□□□ -0.8
SRP54-213ENST00000556994 FAM57BQ71RH2 274 aa10.05□□□□□ -0.8
SRP54-213ENST00000556994 OR2AJ1Q8NGZ0 328 aa10.05□□□□□ -0.8
SRP54-213ENST00000556994 ZDHHC12Q96GR4 267 aa10.05□□□□□ -0.8
SRP54-213ENST00000556994 LIN37Q96GY3 246 aaPredicted RBP10.05□□□□□ -0.8
SRP54-213ENST00000556994 SULT4A1Q9BR01 284 aa10.05□□□□□ -0.8
SRP54-213ENST00000556994 B3GAT1Q9P2W7 334 aa10.05□□□□□ -0.8
SRP54-213ENST00000556994 ASCC3Q8N3C0 2202 aaKnown RBP10.05□□□□□ -0.8
SRP54-213ENST00000556994 IGKV1-9A0A0C4DH69 117 aa10.05□□□□□ -0.8
SRP54-213ENST00000556994 PQLC2LA1A4F0 135 aa10.05□□□□□ -0.8
SRP54-213ENST00000556994 LIPT2A6NK58 231 aa10.05□□□□□ -0.8
SRP54-213ENST00000556994 MFNGO00587 321 aa10.05□□□□□ -0.8
SRP54-213ENST00000556994 OR8U9P0C7N5 309 aa10.05□□□□□ -0.8
SRP54-213ENST00000556994 HKR1P10072 659 aa10.05□□□□□ -0.8
SRP54-213ENST00000556994 RPS2P15880 293 aaKnown RBP10.05□□□□□ -0.8
SRP54-213ENST00000556994 SHHQ15465 462 aa10.05□□□□□ -0.8
SRP54-213ENST00000556994 TGIF1Q15583 401 aa10.05□□□□□ -0.8
SRP54-213ENST00000556994 FAM76BQ5HYJ3 339 aa10.05□□□□□ -0.8
SRP54-213ENST00000556994 LCN10Q6JVE6 187 aa10.05□□□□□ -0.8
SRP54-213ENST00000556994 PEG10Q86TG7 708 aaKnown RBP10.05□□□□□ -0.8
SRP54-213ENST00000556994 OR8U1Q8NH10 309 aa10.05□□□□□ -0.8
SRP54-213ENST00000556994 LILRB1Q8NHL6 650 aaPredicted RBP10.05□□□□□ -0.8
SRP54-213ENST00000556994 DDIT4LQ96D03 193 aa10.05□□□□□ -0.8
SRP54-213ENST00000556994 FBXO17Q96EF6 278 aa10.05□□□□□ -0.8
SRP54-213ENST00000556994 CLCC1Q96S66 551 aa10.05□□□□□ -0.8
SRP54-213ENST00000556994 OCSTAMPQ9BR26 566 aa10.05□□□□□ -0.8
SRP54-213ENST00000556994 FBLN5Q9UBX5 448 aa10.05□□□□□ -0.8
SRP54-213ENST00000556994 WIF1Q9Y5W5 379 aa10.05□□□□□ -0.8
SRP54-213ENST00000556994 RALGAPA1Q6GYQ0 2036 aa10.04□□□□□ -0.8
SRP54-213ENST00000556994 IGKV1D-8A0A087WSZ0 117 aa10.04□□□□□ -0.8
SRP54-213ENST00000556994 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.04□□□□□ -0.8
SRP54-213ENST00000556994 A0A1W2PNR3 127 aa10.04□□□□□ -0.8
SRP54-213ENST00000556994 ANKUB1A6NFN9 424 aa10.04□□□□□ -0.8
SRP54-213ENST00000556994 RHPN2P1A8MT19 583 aa10.04□□□□□ -0.8
SRP54-213ENST00000556994 ZNF878C9JN71 531 aa10.04□□□□□ -0.8
SRP54-213ENST00000556994 KLK2P20151 261 aa10.04□□□□□ -0.8
SRP54-213ENST00000556994 BLVRBP30043 206 aaPredicted RBP10.04□□□□□ -0.8
SRP54-213ENST00000556994 APOBEC1P41238 236 aaKnown RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms