RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 GTF3C1Q12789 2109 aa4.56□□□□□ -1.68
ATXN3-244ENST00000556898 TPBGQ13641 420 aa4.56□□□□□ -1.68
ATXN3-244ENST00000556898 PPA1Q15181 289 aa4.56□□□□□ -1.68
ATXN3-244ENST00000556898 SLC25A35Q3KQZ1 300 aa4.56□□□□□ -1.68
ATXN3-244ENST00000556898 NRN1LQ496H8 165 aa4.56□□□□□ -1.68
ATXN3-244ENST00000556898 DMRTC1Q5HYR2 192 aa4.56□□□□□ -1.68
ATXN3-244ENST00000556898 TMEM255AQ5JRV8 349 aa4.56□□□□□ -1.68
ATXN3-244ENST00000556898 PRR31Q5SQ13 230 aa4.56□□□□□ -1.68
ATXN3-244ENST00000556898 TIMM23BQ5SRD1 257 aa4.56□□□□□ -1.68
ATXN3-244ENST00000556898 GLYATL3Q5SZD4 288 aa4.56□□□□□ -1.68
ATXN3-244ENST00000556898 SPATA46Q5T0L3 261 aa4.56□□□□□ -1.68
ATXN3-244ENST00000556898 FAM27D1Q5T7N8 215 aa4.56□□□□□ -1.68
ATXN3-244ENST00000556898 GPR107Q5VW38 600 aa4.56□□□□□ -1.68
ATXN3-244ENST00000556898 CD276Q5ZPR3 534 aa4.56□□□□□ -1.68
ATXN3-244ENST00000556898 DMKNQ6E0U4 476 aaPredicted RBP4.56□□□□□ -1.68
ATXN3-244ENST00000556898 RPL22L1Q6P5R6 122 aaKnown RBP4.56□□□□□ -1.68
ATXN3-244ENST00000556898 RFPL4BQ6ZWI9 263 aa4.56□□□□□ -1.68
ATXN3-244ENST00000556898 GPR141Q7Z602 305 aa4.56□□□□□ -1.68
ATXN3-244ENST00000556898 THNSL2Q86YJ6 484 aa4.56□□□□□ -1.68
ATXN3-244ENST00000556898 CLVS1Q8IUQ0 354 aaPredicted RBP4.56□□□□□ -1.68
ATXN3-244ENST00000556898 PHC2Q8IXK0 858 aa4.56□□□□□ -1.68
ATXN3-244ENST00000556898 ZNF101Q8IZC7 436 aa4.56□□□□□ -1.68
ATXN3-244ENST00000556898 DTX3Q8N9I9 347 aa4.56□□□□□ -1.68
ATXN3-244ENST00000556898 C1orf162Q8NEQ5 155 aaPredicted RBP4.56□□□□□ -1.68
ATXN3-244ENST00000556898 SLC30A7Q8NEW0 376 aa4.56□□□□□ -1.68
ATXN3-244ENST00000556898 STEAP2Q8NFT2 490 aa4.56□□□□□ -1.68
ATXN3-244ENST00000556898 OR51A4Q8NGJ6 313 aa4.56□□□□□ -1.68
ATXN3-244ENST00000556898 OR2G2Q8NGZ5 317 aa4.56□□□□□ -1.68
ATXN3-244ENST00000556898 GHSRQ92847 366 aa4.56□□□□□ -1.68
ATXN3-244ENST00000556898 NEUROG1Q92886 237 aa4.56□□□□□ -1.68
ATXN3-244ENST00000556898 UFD1Q92890 307 aa4.56□□□□□ -1.68
ATXN3-244ENST00000556898 RNASE6Q93091 150 aaKnown RBP4.56□□□□□ -1.68
ATXN3-244ENST00000556898 SGK3Q96BR1 496 aa4.56□□□□□ -1.68
ATXN3-244ENST00000556898 ZNF799Q96GE5 643 aa4.56□□□□□ -1.68
ATXN3-244ENST00000556898 PGAM5Q96HS1 289 aa4.56□□□□□ -1.68
ATXN3-244ENST00000556898 BOD1Q96IK1 185 aa4.56□□□□□ -1.68
ATXN3-244ENST00000556898 C18orf12Q96KH6 178 aa4.56□□□□□ -1.68
ATXN3-244ENST00000556898 PGLYRP3Q96LB9 341 aa4.56□□□□□ -1.68
ATXN3-244ENST00000556898 FUNDC2Q9BWH2 189 aa4.56□□□□□ -1.68
ATXN3-244ENST00000556898 HDHD2Q9H0R4 259 aa4.56□□□□□ -1.68
ATXN3-244ENST00000556898 PPIL3Q9H2H8 161 aaKnown RBP4.56□□□□□ -1.68
ATXN3-244ENST00000556898 PPP1R3EQ9H7J1 279 aa4.56□□□□□ -1.68
ATXN3-244ENST00000556898 TRIM36Q9NQ86 728 aa4.56□□□□□ -1.68
ATXN3-244ENST00000556898 PTTG3PQ9NZH4 202 aa4.56□□□□□ -1.68
ATXN3-244ENST00000556898 FZR1Q9UM11 496 aa4.56□□□□□ -1.68
ATXN3-244ENST00000556898 AMDHD2Q9Y303 409 aa4.56□□□□□ -1.68
ATXN3-244ENST00000556898 STARD10Q9Y365 291 aa4.56□□□□□ -1.68
ATXN3-244ENST00000556898 CEPT1Q9Y6K0 416 aa4.56□□□□□ -1.68
ATXN3-244ENST00000556898 PHF3Q92576 2039 aaKnown RBP4.56□□□□□ -1.68
ATXN3-244ENST00000556898 PRRC2AP48634 2157 aaKnown RBP4.55□□□□□ -1.68
ATXN3-244ENST00000556898 LOC100506127A0A0U1RQW1 187 aa4.55□□□□□ -1.68
ATXN3-244ENST00000556898 IQCMA0A1B0GVH7 501 aa4.55□□□□□ -1.68
ATXN3-244ENST00000556898 SMIM30A4D0T7 59 aa4.55□□□□□ -1.68
ATXN3-244ENST00000556898 ACOD1A6NK06 481 aa4.55□□□□□ -1.68
ATXN3-244ENST00000556898 ATP6V1G2-DDX39BF2Z307 99 aa4.55□□□□□ -1.68
ATXN3-244ENST00000556898 CCRL2O00421 344 aa4.55□□□□□ -1.68
ATXN3-244ENST00000556898 PIN1P1O15428 100 aa4.55□□□□□ -1.68
ATXN3-244ENST00000556898 PLPP2O43688 288 aa4.55□□□□□ -1.68
ATXN3-244ENST00000556898 GPRIN2O60269 458 aa4.55□□□□□ -1.68
ATXN3-244ENST00000556898 ZNF254O75437 659 aa4.55□□□□□ -1.68
ATXN3-244ENST00000556898 CTAG2O75638 210 aa4.55□□□□□ -1.68
ATXN3-244ENST00000556898 IGKV3-15P01624 115 aa4.55□□□□□ -1.68
ATXN3-244ENST00000556898 IGLV1-44P01699 117 aa4.55□□□□□ -1.68
ATXN3-244ENST00000556898 SERPINA5P05154 406 aa4.55□□□□□ -1.68
ATXN3-244ENST00000556898 TACSTD2P09758 323 aa4.55□□□□□ -1.68
ATXN3-244ENST00000556898 CLEC2LP0C7M8 214 aa4.55□□□□□ -1.68
ATXN3-244ENST00000556898 ZNF35P13682 527 aa4.55□□□□□ -1.68
ATXN3-244ENST00000556898 OTX1P32242 354 aaPredicted RBP4.55□□□□□ -1.68
ATXN3-244ENST00000556898 APLNRP35414 380 aa4.55□□□□□ -1.68
ATXN3-244ENST00000556898 RBMXP38159 391 aaKnown RBP4.55□□□□□ -1.68
ATXN3-244ENST00000556898 CRYBB2P43320 205 aa4.55□□□□□ -1.68
ATXN3-244ENST00000556898 TGM4P49221 684 aa4.55□□□□□ -1.68
ATXN3-244ENST00000556898 TPTEP56180 551 aa4.55□□□□□ -1.68
ATXN3-244ENST00000556898 RPS11P62280 158 aaKnown RBP eCLIP4.55□□□□□ -1.68
ATXN3-244ENST00000556898 GRB2P62993 217 aaKnown RBP4.55□□□□□ -1.68
ATXN3-244ENST00000556898 ZNF92Q03936 586 aa4.55□□□□□ -1.68
ATXN3-244ENST00000556898 ACSM1Q08AH1 577 aa4.55□□□□□ -1.68
ATXN3-244ENST00000556898 HNRNPA0Q13151 305 aaKnown RBP4.55□□□□□ -1.68
ATXN3-244ENST00000556898 TNK1Q13470 666 aa4.55□□□□□ -1.68
ATXN3-244ENST00000556898 HLXQ14774 488 aaPredicted RBP4.55□□□□□ -1.68
ATXN3-244ENST00000556898 ZNF829Q3KNS6 432 aaPredicted RBP4.55□□□□□ -1.68
ATXN3-244ENST00000556898 ALKBH6Q3KRA9 238 aa4.55□□□□□ -1.68
ATXN3-244ENST00000556898 FBXL19-AS1Q494R0 122 aa4.55□□□□□ -1.68
ATXN3-244ENST00000556898 BCL2L15Q5TBC7 163 aa4.55□□□□□ -1.68
ATXN3-244ENST00000556898 ASPHD2Q6ICH7 369 aa4.55□□□□□ -1.68
ATXN3-244ENST00000556898 DEGS2Q6QHC5 323 aa4.55□□□□□ -1.68
ATXN3-244ENST00000556898 CLEC9AQ6UXN8 241 aa4.55□□□□□ -1.68
ATXN3-244ENST00000556898 TMEM91Q6ZNR0 172 aa4.55□□□□□ -1.68
ATXN3-244ENST00000556898 SLC16A12Q6ZSM3 486 aa4.55□□□□□ -1.68
ATXN3-244ENST00000556898 Q71RC1 249 aaPredicted RBP4.55□□□□□ -1.68
ATXN3-244ENST00000556898 RNF144BQ7Z419 303 aa4.55□□□□□ -1.68
ATXN3-244ENST00000556898 KCTD20Q7Z5Y7 419 aa4.55□□□□□ -1.68
ATXN3-244ENST00000556898 PRIMA1Q86XR5 153 aa4.55□□□□□ -1.68
ATXN3-244ENST00000556898 ELMOD2Q8IZ81 293 aa4.55□□□□□ -1.68
ATXN3-244ENST00000556898 C17orf78Q8N4C9 275 aa4.55□□□□□ -1.68
ATXN3-244ENST00000556898 ZNF676Q8N7Q3 588 aa4.55□□□□□ -1.68
ATXN3-244ENST00000556898 OR51E1Q8TCB6 317 aa4.55□□□□□ -1.68
ATXN3-244ENST00000556898 RPS4Y2Q8TD47 263 aa4.55□□□□□ -1.68
ATXN3-244ENST00000556898 FCGR1BQ92637 280 aa4.55□□□□□ -1.68
ATXN3-244ENST00000556898 DVL3Q92997 716 aaPredicted RBP4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms