RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 THRAP10827 490 aa2.34□□□□□ -2.03
SCFD1-221ENST00000556534 TCN2P20062 427 aa2.34□□□□□ -2.03
SCFD1-221ENST00000556534 PRKACBP22694 351 aa2.34□□□□□ -2.03
SCFD1-221ENST00000556534 CD70P32970 193 aa2.34□□□□□ -2.03
SCFD1-221ENST00000556534 NDUFA8P51970 172 aa2.34□□□□□ -2.03
SCFD1-221ENST00000556534 OR2B8PP59922 312 aa2.34□□□□□ -2.03
SCFD1-221ENST00000556534 TNNC1P63316 161 aa2.34□□□□□ -2.03
SCFD1-221ENST00000556534 RPL18AQ02543 176 aaKnown RBP2.34□□□□□ -2.03
SCFD1-221ENST00000556534 XRCC4Q13426 336 aa2.34□□□□□ -2.03
SCFD1-221ENST00000556534 GPR176Q14439 515 aa2.34□□□□□ -2.03
SCFD1-221ENST00000556534 VAMP3Q15836 100 aa2.34□□□□□ -2.03
SCFD1-221ENST00000556534 PRSS8Q16651 343 aa2.34□□□□□ -2.03
SCFD1-221ENST00000556534 ATP6V1FQ16864 119 aa2.34□□□□□ -2.03
SCFD1-221ENST00000556534 TMEM205Q6UW68 189 aa2.34□□□□□ -2.03
SCFD1-221ENST00000556534 TMPRSS11AQ6ZMR5 421 aa2.34□□□□□ -2.03
SCFD1-221ENST00000556534 NDUFAF7Q7L592 441 aa2.34□□□□□ -2.03
SCFD1-221ENST00000556534 RAB43Q86YS6 212 aa2.34□□□□□ -2.03
SCFD1-221ENST00000556534 DAW1Q8N136 415 aa2.34□□□□□ -2.03
SCFD1-221ENST00000556534 METTL13Q8N6R0 699 aa2.34□□□□□ -2.03
SCFD1-221ENST00000556534 COX18Q8N8Q8 333 aa2.34□□□□□ -2.03
SCFD1-221ENST00000556534 OR11H7Q8NGC8 314 aa2.34□□□□□ -2.03
SCFD1-221ENST00000556534 OR52P1PQ8NH57 321 aa2.34□□□□□ -2.03
SCFD1-221ENST00000556534 RMI2Q96E14 147 aa2.34□□□□□ -2.03
SCFD1-221ENST00000556534 ZBED3Q96IU2 234 aaPredicted RBP2.34□□□□□ -2.03
SCFD1-221ENST00000556534 BTN2A3PQ96KV6 586 aa2.34□□□□□ -2.03
SCFD1-221ENST00000556534 GABRG3Q99928 467 aa2.34□□□□□ -2.03
SCFD1-221ENST00000556534 OSBPL11Q9BXB4 747 aa2.34□□□□□ -2.03
SCFD1-221ENST00000556534 SAMD10Q9BYL1 202 aa2.34□□□□□ -2.03
SCFD1-221ENST00000556534 ULBP2Q9BZM5 246 aa2.34□□□□□ -2.03
SCFD1-221ENST00000556534 SPNS1Q9H2V7 528 aa2.34□□□□□ -2.03
SCFD1-221ENST00000556534 CLEC2DQ9UHP7 191 aa2.34□□□□□ -2.03
SCFD1-221ENST00000556534 CES1P1Q9UKY3 287 aa2.34□□□□□ -2.03
SCFD1-221ENST00000556534 POFUT2Q9Y2G5 429 aa2.34□□□□□ -2.03
SCFD1-221ENST00000556534 OR51B2Q9Y5P1 312 aa2.34□□□□□ -2.03
SCFD1-221ENST00000556534 V9GYY9 64 aa2.34□□□□□ -2.03
SCFD1-221ENST00000556534 PALLDQ8WX93 1383 aa2.34□□□□□ -2.04
SCFD1-221ENST00000556534 GPATCH8Q9UKJ3 1502 aaKnown RBP2.33□□□□□ -2.04
SCFD1-221ENST00000556534 IGLV1-50A0A075B6I6 118 aa2.33□□□□□ -2.04
SCFD1-221ENST00000556534 SMIM26A0A096LP01 95 aa2.33□□□□□ -2.04
SCFD1-221ENST00000556534 A0A0A6YYD5 115 aa2.33□□□□□ -2.04
SCFD1-221ENST00000556534 IGHV3OR16-9A0A0B4J2B5 98 aa2.33□□□□□ -2.04
SCFD1-221ENST00000556534 PDZK1P1A8MUH7 402 aa2.33□□□□□ -2.04
SCFD1-221ENST00000556534 ZMPSTE24O75844 475 aa2.33□□□□□ -2.04
SCFD1-221ENST00000556534 PTTG1O95997 202 aa2.33□□□□□ -2.04
SCFD1-221ENST00000556534 GLAP06280 429 aa2.33□□□□□ -2.04
SCFD1-221ENST00000556534 BGNP21810 368 aa2.33□□□□□ -2.04
SCFD1-221ENST00000556534 GNRHRP30968 328 aa2.33□□□□□ -2.04
SCFD1-221ENST00000556534 HCAR3P49019 387 aa2.33□□□□□ -2.04
SCFD1-221ENST00000556534 HCCSP53701 268 aa2.33□□□□□ -2.04
SCFD1-221ENST00000556534 AP1S2P56377 157 aa2.33□□□□□ -2.04
SCFD1-221ENST00000556534 UBE2NP61088 152 aaKnown RBP2.33□□□□□ -2.04
SCFD1-221ENST00000556534 SLC35B1P78383 322 aa2.33□□□□□ -2.04
SCFD1-221ENST00000556534 ARG2P78540 354 aa2.33□□□□□ -2.04
SCFD1-221ENST00000556534 MAD2L1BPQ15013 274 aaPredicted RBP2.33□□□□□ -2.04
SCFD1-221ENST00000556534 TNXAQ16473 311 aa2.33□□□□□ -2.04
SCFD1-221ENST00000556534 KPRPQ5T749 579 aaPredicted RBP2.33□□□□□ -2.04
SCFD1-221ENST00000556534 EPGNQ6UW88 154 aa2.33□□□□□ -2.04
SCFD1-221ENST00000556534 CD300LGQ6UXG3 332 aa2.33□□□□□ -2.04
SCFD1-221ENST00000556534 COPS6Q7L5N1 327 aa2.33□□□□□ -2.04
SCFD1-221ENST00000556534 NEGR1Q7Z3B1 354 aa2.33□□□□□ -2.04
SCFD1-221ENST00000556534 SNX20Q7Z614 316 aa2.33□□□□□ -2.04
SCFD1-221ENST00000556534 CDKL3Q8IVW4 592 aaPredicted RBP2.33□□□□□ -2.04
SCFD1-221ENST00000556534 LGI3Q8N145 548 aa2.33□□□□□ -2.04
SCFD1-221ENST00000556534 OR6K6Q8NGW6 343 aa2.33□□□□□ -2.04
SCFD1-221ENST00000556534 PIFOQ8TCI5 191 aa2.33□□□□□ -2.04
SCFD1-221ENST00000556534 NTAN1Q96AB6 310 aa2.33□□□□□ -2.04
SCFD1-221ENST00000556534 RCN3Q96D15 328 aa2.33□□□□□ -2.04
SCFD1-221ENST00000556534 RBMXL1Q96E39 390 aaKnown RBP2.33□□□□□ -2.04
SCFD1-221ENST00000556534 FAM19A4Q96LR4 140 aa2.33□□□□□ -2.04
SCFD1-221ENST00000556534 GLT1D1Q96MS3 346 aa2.33□□□□□ -2.04
SCFD1-221ENST00000556534 UTP23Q9BRU9 249 aaKnown RBP2.33□□□□□ -2.04
SCFD1-221ENST00000556534 TREM1Q9NP99 234 aa2.33□□□□□ -2.04
SCFD1-221ENST00000556534 MED4Q9NPJ6 270 aa2.33□□□□□ -2.04
SCFD1-221ENST00000556534 RRAGDQ9NQL2 400 aaPredicted RBP2.33□□□□□ -2.04
SCFD1-221ENST00000556534 RGS18Q9NS28 235 aa2.33□□□□□ -2.04
SCFD1-221ENST00000556534 ADAMTSL3P82987 1691 aa2.33□□□□□ -2.04
SCFD1-221ENST00000556534 DOCK8Q8NF50 2099 aa2.33□□□□□ -2.04
SCFD1-221ENST00000556534 TUBGCP6Q96RT7 1819 aa2.33□□□□□ -2.04
SCFD1-221ENST00000556534 RAB19A4D1S5 217 aa2.32□□□□□ -2.04
SCFD1-221ENST00000556534 TVP23AA6NH52 213 aa2.32□□□□□ -2.04
SCFD1-221ENST00000556534 RPL36A-HNRNPH2H7BZ11 118 aa2.32□□□□□ -2.04
SCFD1-221ENST00000556534 DFFAO00273 331 aa2.32□□□□□ -2.04
SCFD1-221ENST00000556534 CCNKO75909 580 aa2.32□□□□□ -2.04
SCFD1-221ENST00000556534 BRI3O95415 125 aa2.32□□□□□ -2.04
SCFD1-221ENST00000556534 GCGP01275 180 aa2.32□□□□□ -2.04
SCFD1-221ENST00000556534 GGT2P36268 569 aa2.32□□□□□ -2.04
SCFD1-221ENST00000556534 RBM34P42696 430 aaKnown RBP2.32□□□□□ -2.04
SCFD1-221ENST00000556534 CDKN2DP55273 166 aa2.32□□□□□ -2.04
SCFD1-221ENST00000556534 RPL31P62899 125 aaKnown RBP2.32□□□□□ -2.04
SCFD1-221ENST00000556534 IFFO1Q0D2I5 559 aa2.32□□□□□ -2.04
SCFD1-221ENST00000556534 PSG3Q16557 428 aa2.32□□□□□ -2.04
SCFD1-221ENST00000556534 ORMDL2Q53FV1 153 aa2.32□□□□□ -2.04
SCFD1-221ENST00000556534 FAM78AQ5JUQ0 283 aa2.32□□□□□ -2.04
SCFD1-221ENST00000556534 DNLZQ5SXM8 178 aa2.32□□□□□ -2.04
SCFD1-221ENST00000556534 CPTPQ5TA50 214 aa2.32□□□□□ -2.04
SCFD1-221ENST00000556534 DUPD1Q68J44 220 aa2.32□□□□□ -2.04
SCFD1-221ENST00000556534 OR2T5Q6IEZ7 315 aa2.32□□□□□ -2.04
SCFD1-221ENST00000556534 OR4D6Q8NGJ1 314 aa2.32□□□□□ -2.04
SCFD1-221ENST00000556534 OR2T29Q8NH02 315 aa2.32□□□□□ -2.04
SCFD1-221ENST00000556534 OR51A7Q8NH64 312 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms