RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 GNALP38405 381 aa18.69■□□□□ 0.58
ACTN1-220ENST00000556433 OPRL1P41146 370 aa18.69■□□□□ 0.58
ACTN1-220ENST00000556433 CSNK2BP67870 215 aa18.69■□□□□ 0.58
ACTN1-220ENST00000556433 PDCD1Q15116 288 aa18.69■□□□□ 0.58
ACTN1-220ENST00000556433 MICBQ29980 383 aa18.69■□□□□ 0.58
ACTN1-220ENST00000556433 C11orf91Q3C1V1 193 aa18.69■□□□□ 0.58
ACTN1-220ENST00000556433 KLHL12Q53G59 568 aa18.69■□□□□ 0.58
ACTN1-220ENST00000556433 FIP1L1Q6UN15 594 aaKnown RBP18.69■□□□□ 0.58
ACTN1-220ENST00000556433 RHOUQ7L0Q8 258 aa18.69■□□□□ 0.58
ACTN1-220ENST00000556433 HIST2H2ABQ8IUE6 130 aaPredicted RBP18.69■□□□□ 0.58
ACTN1-220ENST00000556433 TIGD4Q8IY51 512 aa18.69■□□□□ 0.58
ACTN1-220ENST00000556433 CSNK2A3Q8NEV1 391 aa18.69■□□□□ 0.58
ACTN1-220ENST00000556433 ST8SIA4Q92187 359 aa18.69■□□□□ 0.58
ACTN1-220ENST00000556433 LHX4Q969G2 390 aa18.69■□□□□ 0.58
ACTN1-220ENST00000556433 CCDC124Q96CT7 223 aaKnown RBP18.69■□□□□ 0.58
ACTN1-220ENST00000556433 ASB9Q96DX5 294 aa18.69■□□□□ 0.58
ACTN1-220ENST00000556433 CCL13Q99616 98 aa18.69■□□□□ 0.58
ACTN1-220ENST00000556433 SIRPDQ9H106 197 aa18.69■□□□□ 0.58
ACTN1-220ENST00000556433 CNTD2Q9H8S5 307 aa18.69■□□□□ 0.58
ACTN1-220ENST00000556433 RHBDD3Q9Y3P4 386 aa18.69■□□□□ 0.58
ACTN1-220ENST00000556433 TIPRLO75663 272 aa18.68■□□□□ 0.58
ACTN1-220ENST00000556433 MELTFP08582 738 aa18.68■□□□□ 0.58
ACTN1-220ENST00000556433 MUC1P15941 1255 aaPredicted RBP18.68■□□□□ 0.58
ACTN1-220ENST00000556433 NAA10P41227 235 aaPredicted RBP18.68■□□□□ 0.58
ACTN1-220ENST00000556433 ELF3P78545 371 aaPredicted RBP18.68■□□□□ 0.58
ACTN1-220ENST00000556433 GINS1Q14691 196 aa18.68■□□□□ 0.58
ACTN1-220ENST00000556433 WDR82Q6UXN9 313 aa18.68■□□□□ 0.58
ACTN1-220ENST00000556433 TMEM86BQ8N661 226 aa18.68■□□□□ 0.58
ACTN1-220ENST00000556433 CLPTM1LQ96KA5 538 aa18.68■□□□□ 0.58
ACTN1-220ENST00000556433 MICU1Q9BPX6 476 aa18.68■□□□□ 0.58
ACTN1-220ENST00000556433 PAPOLGQ9BWT3 736 aaKnown RBP18.68■□□□□ 0.58
ACTN1-220ENST00000556433 CHIAQ9BZP6 476 aa18.68■□□□□ 0.58
ACTN1-220ENST00000556433 ACOXLQ9NUZ1 547 aa18.68■□□□□ 0.58
ACTN1-220ENST00000556433 MMP24Q9Y5R2 645 aa18.68■□□□□ 0.58
ACTN1-220ENST00000556433 IGHV1-69DA0A0B4J2H0 117 aa18.67■□□□□ 0.58
ACTN1-220ENST00000556433 PRR23D1E9PI22 279 aaPredicted RBP18.67■□□□□ 0.58
ACTN1-220ENST00000556433 GNGT2O14610 69 aa18.67■□□□□ 0.58
ACTN1-220ENST00000556433 CDIPTO14735 213 aa18.67■□□□□ 0.58
ACTN1-220ENST00000556433 IGHV1-69P01742 117 aa18.67■□□□□ 0.58
ACTN1-220ENST00000556433 PRR23D2P0DMB1 279 aaPredicted RBP18.67■□□□□ 0.58
ACTN1-220ENST00000556433 SNCBQ16143 134 aa18.67■□□□□ 0.58
ACTN1-220ENST00000556433 WDR38Q5JTN6 314 aa18.67■□□□□ 0.58
ACTN1-220ENST00000556433 PLBD1Q6P4A8 553 aa18.67■□□□□ 0.58
ACTN1-220ENST00000556433 TMEM179BQ7Z7N9 219 aa18.67■□□□□ 0.58
ACTN1-220ENST00000556433 ADGRG5Q8IZF4 528 aa18.67■□□□□ 0.58
ACTN1-220ENST00000556433 FGFRL1Q8N441 504 aa18.67■□□□□ 0.58
ACTN1-220ENST00000556433 GALNT4Q8N4A0 578 aa18.67■□□□□ 0.58
ACTN1-220ENST00000556433 CCDC197Q8NCU1 140 aa18.67■□□□□ 0.58
ACTN1-220ENST00000556433 THEM6Q8WUY1 208 aa18.67■□□□□ 0.58
ACTN1-220ENST00000556433 RGCCQ9H4X1 137 aa18.67■□□□□ 0.58
ACTN1-220ENST00000556433 PDP1Q9P0J1 537 aaPredicted RBP18.67■□□□□ 0.58
ACTN1-220ENST00000556433 RPUSD1Q9UJJ7 312 aaKnown RBP18.67■□□□□ 0.58
ACTN1-220ENST00000556433 A0A1B0GW55 424 aa18.66■□□□□ 0.58
ACTN1-220ENST00000556433 ARRDC5A6NEK1 342 aa18.66■□□□□ 0.58
ACTN1-220ENST00000556433 ANXA2P2A6NMY6 339 aa18.66■□□□□ 0.58
ACTN1-220ENST00000556433 ACOT8O14734 319 aa18.66■□□□□ 0.58
ACTN1-220ENST00000556433 LYNP07948 512 aa18.66■□□□□ 0.58
ACTN1-220ENST00000556433 DUX4L2P0CJ85 424 aa18.66■□□□□ 0.58
ACTN1-220ENST00000556433 DUX4L3P0CJ86 424 aa18.66■□□□□ 0.58
ACTN1-220ENST00000556433 DUX4L4P0CJ87 422 aa18.66■□□□□ 0.58
ACTN1-220ENST00000556433 DUX4L5P0CJ88 424 aa18.66■□□□□ 0.58
ACTN1-220ENST00000556433 DUX4L6P0CJ89 424 aa18.66■□□□□ 0.58
ACTN1-220ENST00000556433 DUX4L7P0CJ90 424 aa18.66■□□□□ 0.58
ACTN1-220ENST00000556433 IL5RAQ01344 420 aa18.66■□□□□ 0.58
ACTN1-220ENST00000556433 DUX4L9Q6RFH8 374 aaPredicted RBP18.66■□□□□ 0.58
ACTN1-220ENST00000556433 SLC36A1Q7Z2H8 476 aa18.66■□□□□ 0.58
ACTN1-220ENST00000556433 FTMTQ8N4E7 242 aa18.66■□□□□ 0.58
ACTN1-220ENST00000556433 KIR3DL3Q8N743 410 aa18.66■□□□□ 0.58
ACTN1-220ENST00000556433 ZNF454Q8N9F8 522 aa18.66■□□□□ 0.58
ACTN1-220ENST00000556433 OR4F5Q8NH21 305 aa18.66■□□□□ 0.58
ACTN1-220ENST00000556433 OTOSQ8NHW6 89 aa18.66■□□□□ 0.58
ACTN1-220ENST00000556433 SEH1LQ96EE3 360 aa18.66■□□□□ 0.58
ACTN1-220ENST00000556433 THTPAQ9BU02 230 aa18.66■□□□□ 0.58
ACTN1-220ENST00000556433 BEX1Q9HBH7 125 aa18.66■□□□□ 0.58
ACTN1-220ENST00000556433 TAS2R1Q9NYW7 299 aa18.66■□□□□ 0.58
ACTN1-220ENST00000556433 DUX4Q9UBX2 424 aa18.66■□□□□ 0.58
ACTN1-220ENST00000556433 TRRAPQ9Y4A5 3859 aa18.65■□□□□ 0.58
ACTN1-220ENST00000556433 A0A1B0GUS0 222 aa18.65■□□□□ 0.58
ACTN1-220ENST00000556433 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP18.65■□□□□ 0.58
ACTN1-220ENST00000556433 SELENOFO60613 162 aa18.65■□□□□ 0.58
ACTN1-220ENST00000556433 RAG2P55895 527 aa18.65■□□□□ 0.58
ACTN1-220ENST00000556433 CDONQ4KMG0 1287 aa18.65■□□□□ 0.58
ACTN1-220ENST00000556433 PDZD9Q8IXQ8 264 aa18.65■□□□□ 0.58
ACTN1-220ENST00000556433 FAM216BQ8N7L0 139 aa18.65■□□□□ 0.58
ACTN1-220ENST00000556433 SCCPDHQ8NBX0 429 aa18.65■□□□□ 0.58
ACTN1-220ENST00000556433 TBC1D15Q8TC07 691 aa18.65■□□□□ 0.58
ACTN1-220ENST00000556433 CANT1Q8WVQ1 401 aa18.65■□□□□ 0.58
ACTN1-220ENST00000556433 SSMEM1Q8WWF3 244 aa18.65■□□□□ 0.58
ACTN1-220ENST00000556433 ITPKCQ96DU7 683 aa18.65■□□□□ 0.58
ACTN1-220ENST00000556433 RTL8AQ9BWD3 113 aa18.65■□□□□ 0.58
ACTN1-220ENST00000556433 TLNRD1Q9H1K6 362 aa18.65■□□□□ 0.58
ACTN1-220ENST00000556433 C1RLQ9NZP8 487 aa18.65■□□□□ 0.58
ACTN1-220ENST00000556433 MPC1Q9Y5U8 109 aa18.65■□□□□ 0.58
ACTN1-220ENST00000556433 KPTNQ9Y664 436 aa18.65■□□□□ 0.58
ACTN1-220ENST00000556433 POMT1Q9Y6A1 747 aa18.65■□□□□ 0.58
ACTN1-220ENST00000556433 ZNF850A8MQ14 1090 aa18.64■□□□□ 0.57
ACTN1-220ENST00000556433 NDUFB3O43676 98 aa18.64■□□□□ 0.57
ACTN1-220ENST00000556433 FAM107AO95990 144 aa18.64■□□□□ 0.57
ACTN1-220ENST00000556433 KNG1P01042 644 aa18.64■□□□□ 0.57
ACTN1-220ENST00000556433 HMGN1P05114 100 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms