RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 RHOAP61586 193 aa3.35□□□□□ -1.87
SCFD1-211ENST00000554437 RPL18AQ02543 176 aaKnown RBP3.35□□□□□ -1.87
SCFD1-211ENST00000554437 KIR2DS1Q14954 304 aa3.35□□□□□ -1.87
SCFD1-211ENST00000554437 TRAM1Q15629 374 aa3.35□□□□□ -1.87
SCFD1-211ENST00000554437 RFX4Q33E94 735 aa3.35□□□□□ -1.87
SCFD1-211ENST00000554437 SMUG1Q53HV7 270 aa3.35□□□□□ -1.87
SCFD1-211ENST00000554437 PDZD11Q5EBL8 140 aa3.35□□□□□ -1.87
SCFD1-211ENST00000554437 OR10J3Q5JRS4 329 aa3.35□□□□□ -1.87
SCFD1-211ENST00000554437 IL34Q6ZMJ4 242 aa3.35□□□□□ -1.87
SCFD1-211ENST00000554437 PRSS41Q7RTY9 318 aa3.35□□□□□ -1.87
SCFD1-211ENST00000554437 PEX26Q7Z412 305 aa3.35□□□□□ -1.87
SCFD1-211ENST00000554437 ENTHD1Q8IYW4 607 aa3.35□□□□□ -1.87
SCFD1-211ENST00000554437 Q8N402 240 aa3.35□□□□□ -1.87
SCFD1-211ENST00000554437 PNKDQ8N490 385 aa3.35□□□□□ -1.87
SCFD1-211ENST00000554437 CCDC71LQ8N9Z2 235 aa3.35□□□□□ -1.87
SCFD1-211ENST00000554437 OR8G5Q8NG78 346 aa3.35□□□□□ -1.87
SCFD1-211ENST00000554437 OR5M1Q8NGP8 315 aa3.35□□□□□ -1.87
SCFD1-211ENST00000554437 SDR42E1Q8WUS8 393 aa3.35□□□□□ -1.87
SCFD1-211ENST00000554437 CHCHD10Q8WYQ3 142 aaPredicted RBP3.35□□□□□ -1.87
SCFD1-211ENST00000554437 TMEM230Q96A57 120 aa3.35□□□□□ -1.87
SCFD1-211ENST00000554437 YIPF6Q96EC8 236 aa3.35□□□□□ -1.87
SCFD1-211ENST00000554437 ZNF488Q96MN9 340 aa3.35□□□□□ -1.87
SCFD1-211ENST00000554437 C20orf85Q9H1P6 137 aa3.35□□□□□ -1.87
SCFD1-211ENST00000554437 CENPHQ9H3R5 247 aa3.35□□□□□ -1.87
SCFD1-211ENST00000554437 ZNF442Q9H7R0 627 aa3.35□□□□□ -1.87
SCFD1-211ENST00000554437 RDH14Q9HBH5 336 aa3.35□□□□□ -1.87
SCFD1-211ENST00000554437 HRASLSQ9HDD0 168 aa3.35□□□□□ -1.87
SCFD1-211ENST00000554437 ZDHHC4Q9NPG8 344 aa3.35□□□□□ -1.87
SCFD1-211ENST00000554437 TMEM9BQ9NQ34 198 aa3.35□□□□□ -1.87
SCFD1-211ENST00000554437 FGFR1OP2Q9NVK5 253 aa3.35□□□□□ -1.87
SCFD1-211ENST00000554437 BABAM2Q9NXR7 383 aa3.35□□□□□ -1.87
SCFD1-211ENST00000554437 IL37Q9NZH6 218 aa3.35□□□□□ -1.87
SCFD1-211ENST00000554437 SAMHD1Q9Y3Z3 626 aaKnown RBP3.35□□□□□ -1.87
SCFD1-211ENST00000554437 OR51B2Q9Y5P1 312 aa3.35□□□□□ -1.87
SCFD1-211ENST00000554437 KIAA0232Q92628 1395 aa3.35□□□□□ -1.87
SCFD1-211ENST00000554437 IGHV3OR16-13A0A075B7E8 117 aa3.34□□□□□ -1.87
SCFD1-211ENST00000554437 A0A0B4J2A0 478 aa3.34□□□□□ -1.87
SCFD1-211ENST00000554437 KIR2DL5BA0A0G2JN68 375 aa3.34□□□□□ -1.87
SCFD1-211ENST00000554437 KIR2DL5BA0A0G2JPC4 375 aa3.34□□□□□ -1.87
SCFD1-211ENST00000554437 TMEM114B3SHH9 223 aa3.34□□□□□ -1.87
SCFD1-211ENST00000554437 H0Y980 276 aa3.34□□□□□ -1.87
SCFD1-211ENST00000554437 J3QLI3 93 aa3.34□□□□□ -1.87
SCFD1-211ENST00000554437 M0QZ92 97 aa3.34□□□□□ -1.87
SCFD1-211ENST00000554437 M0R036 132 aa3.34□□□□□ -1.87
SCFD1-211ENST00000554437 CDIPTO14735 213 aa3.34□□□□□ -1.87
SCFD1-211ENST00000554437 CRXO43186 299 aaPredicted RBP3.34□□□□□ -1.87
SCFD1-211ENST00000554437 HCRTR1O43613 425 aa3.34□□□□□ -1.87
SCFD1-211ENST00000554437 MPZL2O60487 215 aa3.34□□□□□ -1.87
SCFD1-211ENST00000554437 HPGDSO60760 199 aa3.34□□□□□ -1.87
SCFD1-211ENST00000554437 SHOX2O60902 331 aaPredicted RBP3.34□□□□□ -1.87
SCFD1-211ENST00000554437 SUPT7LO94864 414 aa3.34□□□□□ -1.87
SCFD1-211ENST00000554437 VAMP5O95183 116 aa3.34□□□□□ -1.87
SCFD1-211ENST00000554437 LYPLA2O95372 231 aa3.34□□□□□ -1.87
SCFD1-211ENST00000554437 ATP6V1G2O95670 118 aa3.34□□□□□ -1.87
SCFD1-211ENST00000554437 RAB3DO95716 219 aa3.34□□□□□ -1.87
SCFD1-211ENST00000554437 AIFM1O95831 613 aa3.34□□□□□ -1.87
SCFD1-211ENST00000554437 HLA-AP01891 365 aaKnown RBP3.34□□□□□ -1.87
SCFD1-211ENST00000554437 RPS17P08708 135 aaKnown RBP3.34□□□□□ -1.87
SCFD1-211ENST00000554437 OR5AL1P0C617 328 aa3.34□□□□□ -1.87
SCFD1-211ENST00000554437 LIMS3P0CW19 117 aa3.34□□□□□ -1.87
SCFD1-211ENST00000554437 LIMS4P0CW20 117 aa3.34□□□□□ -1.87
SCFD1-211ENST00000554437 HIST1H1CP16403 213 aaKnown RBP3.34□□□□□ -1.87
SCFD1-211ENST00000554437 PVALBP20472 110 aaPredicted RBP3.34□□□□□ -1.87
SCFD1-211ENST00000554437 MDKP21741 143 aaPredicted RBP3.34□□□□□ -1.87
SCFD1-211ENST00000554437 HSD11B1P28845 292 aa3.34□□□□□ -1.87
SCFD1-211ENST00000554437 UBE2E1P51965 193 aa3.34□□□□□ -1.87
SCFD1-211ENST00000554437 AQP5P55064 265 aa3.34□□□□□ -1.87
SCFD1-211ENST00000554437 NUP107P57740 925 aa3.34□□□□□ -1.87
SCFD1-211ENST00000554437 OR10A3P58181 314 aa3.34□□□□□ -1.87
SCFD1-211ENST00000554437 TAS2R31P59538 309 aa3.34□□□□□ -1.87
SCFD1-211ENST00000554437 NUTF2P61970 127 aaKnown RBP3.34□□□□□ -1.87
SCFD1-211ENST00000554437 SELENOTP62341 195 aa3.34□□□□□ -1.87
SCFD1-211ENST00000554437 MXD1Q05195 221 aa3.34□□□□□ -1.87
SCFD1-211ENST00000554437 MGAT3Q09327 533 aa3.34□□□□□ -1.87
SCFD1-211ENST00000554437 ATP6AP1Q15904 470 aa3.34□□□□□ -1.87
SCFD1-211ENST00000554437 ZNF658BQ4V348 819 aaPredicted RBP3.34□□□□□ -1.87
SCFD1-211ENST00000554437 ACTBL2Q562R1 376 aa3.34□□□□□ -1.87
SCFD1-211ENST00000554437 CCNJQ5T5M9 372 aa3.34□□□□□ -1.87
SCFD1-211ENST00000554437 LPCAT4Q643R3 524 aa3.34□□□□□ -1.87
SCFD1-211ENST00000554437 HBMQ6B0K9 141 aa3.34□□□□□ -1.87
SCFD1-211ENST00000554437 WDR74Q6RFH5 385 aaPredicted RBP3.34□□□□□ -1.87
SCFD1-211ENST00000554437 NPSR1Q6W5P4 371 aa3.34□□□□□ -1.87
SCFD1-211ENST00000554437 FAM220AQ7Z4H9 259 aa3.34□□□□□ -1.87
SCFD1-211ENST00000554437 MRPL55Q7Z7F7 128 aaKnown RBP3.34□□□□□ -1.87
SCFD1-211ENST00000554437 MKXQ8IYA7 352 aa3.34□□□□□ -1.87
SCFD1-211ENST00000554437 FAM71AQ8IYT1 594 aa3.34□□□□□ -1.87
SCFD1-211ENST00000554437 KIR2DL5AQ8N109 375 aa3.34□□□□□ -1.87
SCFD1-211ENST00000554437 CBR4Q8N4T8 237 aa3.34□□□□□ -1.87
SCFD1-211ENST00000554437 ATPAF2Q8N5M1 289 aa3.34□□□□□ -1.87
SCFD1-211ENST00000554437 DCAF4L2Q8NA75 395 aa3.34□□□□□ -1.87
SCFD1-211ENST00000554437 LINC01555Q8NAE3 123 aa3.34□□□□□ -1.87
SCFD1-211ENST00000554437 OR4F15Q8NGB8 312 aa3.34□□□□□ -1.87
SCFD1-211ENST00000554437 OR10G3Q8NGC4 313 aa3.34□□□□□ -1.87
SCFD1-211ENST00000554437 OR52E2Q8NGJ4 325 aa3.34□□□□□ -1.87
SCFD1-211ENST00000554437 OR5L1Q8NGL2 311 aa3.34□□□□□ -1.87
SCFD1-211ENST00000554437 OR6Q1Q8NGQ2 317 aa3.34□□□□□ -1.87
SCFD1-211ENST00000554437 KIR2DL5BQ8NHK3 375 aa3.34□□□□□ -1.87
SCFD1-211ENST00000554437 C7orf33Q8WU49 177 aa3.34□□□□□ -1.87
SCFD1-211ENST00000554437 PPWD1Q96BP3 646 aaKnown RBP3.34□□□□□ -1.87
SCFD1-211ENST00000554437 PPP1R36Q96LQ0 422 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms