RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 OR52E2Q8NGJ4 325 aa8.49□□□□□ -1.05
SIX4-202ENST00000554079 OR51A4Q8NGJ6 313 aa8.49□□□□□ -1.05
SIX4-202ENST00000554079 FAM213BQ8TBF2 198 aa8.49□□□□□ -1.05
SIX4-202ENST00000554079 THAP3Q8WTV1 239 aaPredicted RBP8.49□□□□□ -1.05
SIX4-202ENST00000554079 LYSMD1Q96S90 227 aa8.49□□□□□ -1.05
SIX4-202ENST00000554079 WWTR1Q9GZV5 400 aa8.49□□□□□ -1.05
SIX4-202ENST00000554079 PCBD2Q9H0N5 130 aa8.49□□□□□ -1.05
SIX4-202ENST00000554079 OR10A5Q9H207 317 aa8.49□□□□□ -1.05
SIX4-202ENST00000554079 R3HDMLQ9H3Y0 253 aa8.49□□□□□ -1.05
SIX4-202ENST00000554079 METTL8Q9H825 291 aaKnown RBP8.49□□□□□ -1.05
SIX4-202ENST00000554079 ZMAT3Q9HA38 289 aaKnown RBP8.49□□□□□ -1.05
SIX4-202ENST00000554079 KIAA1456Q9P272 454 aa8.49□□□□□ -1.05
SIX4-202ENST00000554079 IKZF2Q9UKS7 526 aa8.49□□□□□ -1.05
SIX4-202ENST00000554079 PPIAL4AQ9Y536 164 aa8.49□□□□□ -1.05
SIX4-202ENST00000554079 A0A0A6YYH2 397 aa8.48□□□□□ -1.05
SIX4-202ENST00000554079 A0A1B0GTH9 108 aa8.48□□□□□ -1.05
SIX4-202ENST00000554079 A0A1W2PQ45 241 aaPredicted RBP8.48□□□□□ -1.05
SIX4-202ENST00000554079 A0A1W2PQY0 241 aa8.48□□□□□ -1.05
SIX4-202ENST00000554079 FITM1A5D6W6 292 aa8.48□□□□□ -1.05
SIX4-202ENST00000554079 A6NJ64 397 aa8.48□□□□□ -1.05
SIX4-202ENST00000554079 ZNF705FA8MVS1 300 aaPredicted RBP8.48□□□□□ -1.05
SIX4-202ENST00000554079 ATXN7O15265 892 aaPredicted RBP8.48□□□□□ -1.05
SIX4-202ENST00000554079 DEDDO75618 318 aa8.48□□□□□ -1.05
SIX4-202ENST00000554079 HMGN2P05204 90 aaKnown RBP8.48□□□□□ -1.05
SIX4-202ENST00000554079 OR5G3P0C626 314 aa8.48□□□□□ -1.05
SIX4-202ENST00000554079 ZNF705DP0CH99 300 aaPredicted RBP8.48□□□□□ -1.05
SIX4-202ENST00000554079 ZNF705BP0CI00 300 aaPredicted RBP8.48□□□□□ -1.05
SIX4-202ENST00000554079 LAMP2P13473 410 aa8.48□□□□□ -1.05
SIX4-202ENST00000554079 NPPBP16860 134 aa8.48□□□□□ -1.05
SIX4-202ENST00000554079 DTYMKP23919 212 aa8.48□□□□□ -1.05
SIX4-202ENST00000554079 GRPRP30550 384 aa8.48□□□□□ -1.05
SIX4-202ENST00000554079 PTGER1P34995 402 aa8.48□□□□□ -1.05
SIX4-202ENST00000554079 HRH1P35367 487 aa8.48□□□□□ -1.05
SIX4-202ENST00000554079 BSGP35613 385 aa8.48□□□□□ -1.05
SIX4-202ENST00000554079 EFNA3P52797 238 aa8.48□□□□□ -1.05
SIX4-202ENST00000554079 CEBPGP53567 150 aa8.48□□□□□ -1.05
SIX4-202ENST00000554079 PRKAG1P54619 331 aa8.48□□□□□ -1.05
SIX4-202ENST00000554079 RANP62826 216 aaKnown RBP8.48□□□□□ -1.05
SIX4-202ENST00000554079 RPS24P62847 133 aaKnown RBP8.48□□□□□ -1.05
SIX4-202ENST00000554079 RPL19P84098 196 aaKnown RBP8.48□□□□□ -1.05
SIX4-202ENST00000554079 DMWDQ09019 674 aa8.48□□□□□ -1.05
SIX4-202ENST00000554079 PRDX4Q13162 271 aa8.48□□□□□ -1.05
SIX4-202ENST00000554079 MRPL49Q13405 166 aaKnown RBP8.48□□□□□ -1.05
SIX4-202ENST00000554079 RUNX2Q13950 521 aa8.48□□□□□ -1.05
SIX4-202ENST00000554079 TMEM95Q3KNT9 176 aa8.48□□□□□ -1.05
SIX4-202ENST00000554079 C1orf189Q5VU69 101 aa8.48□□□□□ -1.05
SIX4-202ENST00000554079 TMEM64Q6YI46 380 aa8.48□□□□□ -1.05
SIX4-202ENST00000554079 RFLNAQ6ZTI6 216 aa8.48□□□□□ -1.05
SIX4-202ENST00000554079 GRINAQ7Z429 371 aa8.48□□□□□ -1.05
SIX4-202ENST00000554079 GVQW1Q8N7I0 195 aa8.48□□□□□ -1.05
SIX4-202ENST00000554079 OR2D3Q8NGH3 330 aa8.48□□□□□ -1.05
SIX4-202ENST00000554079 GPR119Q8TDV5 335 aa8.48□□□□□ -1.05
SIX4-202ENST00000554079 BPIFA2Q96DR5 249 aa8.48□□□□□ -1.05
SIX4-202ENST00000554079 RSPRY1Q96DX4 576 aa8.48□□□□□ -1.05
SIX4-202ENST00000554079 KTI12Q96EK9 354 aaPredicted RBP8.48□□□□□ -1.05
SIX4-202ENST00000554079 OR7D2Q96RA2 312 aa8.48□□□□□ -1.05
SIX4-202ENST00000554079 PRRX2Q99811 253 aa8.48□□□□□ -1.05
SIX4-202ENST00000554079 ABHD14AQ9BUJ0 271 aa8.48□□□□□ -1.05
SIX4-202ENST00000554079 C5orf66Q9H5L9 145 aa8.48□□□□□ -1.05
SIX4-202ENST00000554079 ZNF319Q9P2F9 582 aa8.48□□□□□ -1.05
SIX4-202ENST00000554079 MRM2Q9UI43 246 aaKnown RBP8.48□□□□□ -1.05
SIX4-202ENST00000554079 GTF2A1LQ9UNN4 478 aa8.48□□□□□ -1.05
SIX4-202ENST00000554079 ZNF443Q9Y2A4 671 aaPredicted RBP8.48□□□□□ -1.05
SIX4-202ENST00000554079 WDR45Q9Y484 360 aa8.48□□□□□ -1.05
SIX4-202ENST00000554079 LIPGQ9Y5X9 500 aa8.48□□□□□ -1.05
SIX4-202ENST00000554079 SPTBP11277 2137 aa8.48□□□□□ -1.05
SIX4-202ENST00000554079 IGHV2-70DA0A0C4DH43 119 aa8.47□□□□□ -1.05
SIX4-202ENST00000554079 TMEM202A6NGA9 273 aa8.47□□□□□ -1.05
SIX4-202ENST00000554079 CCDC85CA6NKD9 419 aa8.47□□□□□ -1.05
SIX4-202ENST00000554079 CEACAM18A8MTB9 384 aa8.47□□□□□ -1.05
SIX4-202ENST00000554079 WNT10BO00744 389 aa8.47□□□□□ -1.05
SIX4-202ENST00000554079 AHSA1O95433 338 aa8.47□□□□□ -1.05
SIX4-202ENST00000554079 CNOT4O95628 575 aaKnown RBP8.47□□□□□ -1.05
SIX4-202ENST00000554079 SOD2P04179 222 aa8.47□□□□□ -1.05
SIX4-202ENST00000554079 ATP1B2P14415 290 aaPredicted RBP8.47□□□□□ -1.05
SIX4-202ENST00000554079 HIST1H1CP16403 213 aaKnown RBP8.47□□□□□ -1.05
SIX4-202ENST00000554079 UBE2G2P60604 165 aa8.47□□□□□ -1.05
SIX4-202ENST00000554079 VAMP2P63027 116 aa8.47□□□□□ -1.05
SIX4-202ENST00000554079 TDRG1Q3Y452 100 aa8.47□□□□□ -1.05
SIX4-202ENST00000554079 TMEM176BQ3YBM2 270 aaPredicted RBP8.47□□□□□ -1.05
SIX4-202ENST00000554079 ASPHD2Q6ICH7 369 aa8.47□□□□□ -1.05
SIX4-202ENST00000554079 ZNF880Q6PDB4 577 aa8.47□□□□□ -1.05
SIX4-202ENST00000554079 NXPE4Q6UWF7 544 aa8.47□□□□□ -1.05
SIX4-202ENST00000554079 PRSS57Q6UWY2 283 aa8.47□□□□□ -1.05
SIX4-202ENST00000554079 TRAPPC6BQ86SZ2 158 aa8.47□□□□□ -1.05
SIX4-202ENST00000554079 TGIF2LYQ8IUE0 185 aa8.47□□□□□ -1.05
SIX4-202ENST00000554079 D2HGDHQ8N465 521 aa8.47□□□□□ -1.05
SIX4-202ENST00000554079 METTL27Q8N6F8 245 aaPredicted RBP8.47□□□□□ -1.05
SIX4-202ENST00000554079 OR4K13Q8NH42 304 aa8.47□□□□□ -1.05
SIX4-202ENST00000554079 OR51A7Q8NH64 312 aa8.47□□□□□ -1.05
SIX4-202ENST00000554079 ZCCHC14Q8WYQ9 949 aaKnown RBP8.47□□□□□ -1.05
SIX4-202ENST00000554079 CDS1Q92903 461 aa8.47□□□□□ -1.05
SIX4-202ENST00000554079 MRGPRX1Q96LB2 322 aa8.47□□□□□ -1.05
SIX4-202ENST00000554079 P4HTMQ9NXG6 502 aa8.47□□□□□ -1.05
SIX4-202ENST00000554079 GPR132Q9UNW8 380 aa8.47□□□□□ -1.05
SIX4-202ENST00000554079 SLC7A11Q9UPY5 501 aa8.47□□□□□ -1.05
SIX4-202ENST00000554079 FUT9Q9Y231 359 aa8.47□□□□□ -1.05
SIX4-202ENST00000554079 MEMO1Q9Y316 297 aa8.47□□□□□ -1.05
SIX4-202ENST00000554079 FCF1Q9Y324 198 aaKnown RBP8.47□□□□□ -1.05
SIX4-202ENST00000554079 WSB1Q9Y6I7 421 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms