RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 HAO2Q9NYQ3 351 aa7.07□□□□□ -1.28
PSEN1-209ENST00000553855 MRPL15Q9P015 296 aaKnown RBP7.07□□□□□ -1.28
PSEN1-209ENST00000553855 FBLN5Q9UBX5 448 aa7.07□□□□□ -1.28
PSEN1-209ENST00000553855 PCDHGB1Q9Y5G3 927 aa7.07□□□□□ -1.28
PSEN1-209ENST00000553855 TMEM269A0A1B0GVZ9 245 aa7.06□□□□□ -1.28
PSEN1-209ENST00000553855 CCDC182A6NF36 153 aa7.06□□□□□ -1.28
PSEN1-209ENST00000553855 H0YHG0 523 aa7.06□□□□□ -1.28
PSEN1-209ENST00000553855 MTRF1O75570 445 aaKnown RBP7.06□□□□□ -1.28
PSEN1-209ENST00000553855 TGFAP01135 160 aa7.06□□□□□ -1.28
PSEN1-209ENST00000553855 SBK2P0C263 348 aa7.06□□□□□ -1.28
PSEN1-209ENST00000553855 OR2T7P0C7T2 308 aa7.06□□□□□ -1.28
PSEN1-209ENST00000553855 CA6P23280 308 aa7.06□□□□□ -1.28
PSEN1-209ENST00000553855 EPHA2P29317 976 aa7.06□□□□□ -1.28
PSEN1-209ENST00000553855 DCTDP32321 178 aa7.06□□□□□ -1.28
PSEN1-209ENST00000553855 POLR2IP36954 125 aaKnown RBP7.06□□□□□ -1.28
PSEN1-209ENST00000553855 MTNR1AP48039 350 aa7.06□□□□□ -1.28
PSEN1-209ENST00000553855 CXCR4P61073 352 aa7.06□□□□□ -1.28
PSEN1-209ENST00000553855 ACTC1P68032 377 aa7.06□□□□□ -1.28
PSEN1-209ENST00000553855 ACTA1P68133 377 aa7.06□□□□□ -1.28
PSEN1-209ENST00000553855 ZNF92Q03936 586 aa7.06□□□□□ -1.28
PSEN1-209ENST00000553855 RCN1Q15293 331 aa7.06□□□□□ -1.28
PSEN1-209ENST00000553855 SNAI3Q3KNW1 292 aa7.06□□□□□ -1.28
PSEN1-209ENST00000553855 AVPI1Q5T686 147 aa7.06□□□□□ -1.28
PSEN1-209ENST00000553855 STEAP3Q658P3 488 aa7.06□□□□□ -1.28
PSEN1-209ENST00000553855 ZNF322Q6U7Q0 402 aaPredicted RBP7.06□□□□□ -1.28
PSEN1-209ENST00000553855 PLEKHG7Q6ZR37 379 aa7.06□□□□□ -1.28
PSEN1-209ENST00000553855 BCDIN3DQ7Z5W3 292 aaKnown RBP7.06□□□□□ -1.28
PSEN1-209ENST00000553855 MUC20Q8N307 709 aaPredicted RBP7.06□□□□□ -1.28
PSEN1-209ENST00000553855 GALNT4Q8N4A0 578 aa7.06□□□□□ -1.28
PSEN1-209ENST00000553855 KLHL36Q8N4N3 616 aa7.06□□□□□ -1.28
PSEN1-209ENST00000553855 SPICQ8N5J4 248 aa7.06□□□□□ -1.28
PSEN1-209ENST00000553855 YIPF7Q8N8F6 280 aa7.06□□□□□ -1.28
PSEN1-209ENST00000553855 LINC01356Q8N9X3 169 aa7.06□□□□□ -1.28
PSEN1-209ENST00000553855 OR10H4Q8NGA5 316 aa7.06□□□□□ -1.28
PSEN1-209ENST00000553855 OR10AD1Q8NGE0 317 aa7.06□□□□□ -1.28
PSEN1-209ENST00000553855 OR56B2PQ8NGI1 322 aa7.06□□□□□ -1.28
PSEN1-209ENST00000553855 OR2T27Q8NH04 317 aa7.06□□□□□ -1.28
PSEN1-209ENST00000553855 YIPF5Q969M3 257 aa7.06□□□□□ -1.28
PSEN1-209ENST00000553855 OR8B4Q96RC9 309 aa7.06□□□□□ -1.28
PSEN1-209ENST00000553855 ADAT1Q9BUB4 502 aaKnown RBP7.06□□□□□ -1.28
PSEN1-209ENST00000553855 ADI1Q9BV57 179 aa7.06□□□□□ -1.28
PSEN1-209ENST00000553855 MOB1AQ9H8S9 216 aa7.06□□□□□ -1.28
PSEN1-209ENST00000553855 FN3KRPQ9HA64 309 aa7.06□□□□□ -1.28
PSEN1-209ENST00000553855 TMEM106BQ9NUM4 274 aa7.06□□□□□ -1.28
PSEN1-209ENST00000553855 SMPD3Q9NY59 655 aaPredicted RBP7.06□□□□□ -1.28
PSEN1-209ENST00000553855 UBAP1Q9NZ09 502 aa7.06□□□□□ -1.28
PSEN1-209ENST00000553855 TREM2Q9NZC2 230 aa7.06□□□□□ -1.28
PSEN1-209ENST00000553855 LPAR3Q9UBY5 353 aa7.06□□□□□ -1.28
PSEN1-209ENST00000553855 LRP12Q9Y561 859 aa7.06□□□□□ -1.28
PSEN1-209ENST00000553855 LOC100130705A0A1B0GUX0 176 aa7.05□□□□□ -1.28
PSEN1-209ENST00000553855 SCO2A0A1W2PP80 73 aa7.05□□□□□ -1.28
PSEN1-209ENST00000553855 DAPL1A0PJW8 107 aa7.05□□□□□ -1.28
PSEN1-209ENST00000553855 LRP5LA4QPB2 252 aa7.05□□□□□ -1.28
PSEN1-209ENST00000553855 ERICH4A6NGS2 130 aa7.05□□□□□ -1.28
PSEN1-209ENST00000553855 A6NLC8 198 aa7.05□□□□□ -1.28
PSEN1-209ENST00000553855 B4DSR2 109 aa7.05□□□□□ -1.28
PSEN1-209ENST00000553855 F5H5P2 479 aa7.05□□□□□ -1.28
PSEN1-209ENST00000553855 LOC110117498-PIK3R3F6TDL0 507 aa7.05□□□□□ -1.28
PSEN1-209ENST00000553855 PSMD9O00233 223 aa7.05□□□□□ -1.28
PSEN1-209ENST00000553855 LMX1BO60663 402 aa7.05□□□□□ -1.28
PSEN1-209ENST00000553855 RP2O75695 350 aa7.05□□□□□ -1.28
PSEN1-209ENST00000553855 IGHV4-31P0DP07 118 aa7.05□□□□□ -1.28
PSEN1-209ENST00000553855 PSKH1P11801 424 aa7.05□□□□□ -1.28
PSEN1-209ENST00000553855 ATP6V1B1P15313 513 aa7.05□□□□□ -1.28
PSEN1-209ENST00000553855 HCCSP53701 268 aa7.05□□□□□ -1.28
PSEN1-209ENST00000553855 SNRPGP62308 76 aaKnown RBP7.05□□□□□ -1.28
PSEN1-209ENST00000553855 IL5RAQ01344 420 aa7.05□□□□□ -1.28
PSEN1-209ENST00000553855 ROM1Q03395 351 aa7.05□□□□□ -1.28
PSEN1-209ENST00000553855 MED21Q13503 144 aa7.05□□□□□ -1.28
PSEN1-209ENST00000553855 KCNJ8Q15842 424 aa7.05□□□□□ -1.28
PSEN1-209ENST00000553855 LRRC36Q1X8D7 754 aa7.05□□□□□ -1.28
PSEN1-209ENST00000553855 C6orf52Q5T4I8 152 aa7.05□□□□□ -1.28
PSEN1-209ENST00000553855 BCL2L15Q5TBC7 163 aa7.05□□□□□ -1.28
PSEN1-209ENST00000553855 TTC23Q5W5X9 447 aa7.05□□□□□ -1.28
PSEN1-209ENST00000553855 Q6ZR03 302 aa7.05□□□□□ -1.28
PSEN1-209ENST00000553855 GLCCI1Q86VQ1 547 aa7.05□□□□□ -1.28
PSEN1-209ENST00000553855 TEX29Q8N6K0 151 aa7.05□□□□□ -1.28
PSEN1-209ENST00000553855 PACRGLQ8N7B6 248 aa7.05□□□□□ -1.28
PSEN1-209ENST00000553855 SETD9Q8NE22 299 aa7.05□□□□□ -1.28
PSEN1-209ENST00000553855 OR51F2Q8NH61 342 aa7.05□□□□□ -1.28
PSEN1-209ENST00000553855 CLDND2Q8NHS1 167 aa7.05□□□□□ -1.28
PSEN1-209ENST00000553855 SPSB4Q96A44 273 aa7.05□□□□□ -1.28
PSEN1-209ENST00000553855 SGK3Q96BR1 496 aa7.05□□□□□ -1.28
PSEN1-209ENST00000553855 RNFT2Q96EX2 444 aa7.05□□□□□ -1.28
PSEN1-209ENST00000553855 C16orf92Q96LL3 132 aa7.05□□□□□ -1.28
PSEN1-209ENST00000553855 AMELYQ99218 206 aa7.05□□□□□ -1.28
PSEN1-209ENST00000553855 TBX5Q99593 518 aa7.05□□□□□ -1.28
PSEN1-209ENST00000553855 MICU1Q9BPX6 476 aa7.05□□□□□ -1.28
PSEN1-209ENST00000553855 PAPOLGQ9BWT3 736 aaKnown RBP7.05□□□□□ -1.28
PSEN1-209ENST00000553855 BEX2Q9BXY8 128 aa7.05□□□□□ -1.28
PSEN1-209ENST00000553855 TTTY10Q9BZA0 68 aa7.05□□□□□ -1.28
PSEN1-209ENST00000553855 SHARPINQ9H0F6 387 aa7.05□□□□□ -1.28
PSEN1-209ENST00000553855 ADGRL4Q9HBW9 690 aa7.05□□□□□ -1.28
PSEN1-209ENST00000553855 WIPI2Q9Y4P8 454 aa7.05□□□□□ -1.28
PSEN1-209ENST00000553855 MPC1Q9Y5U8 109 aa7.05□□□□□ -1.28
PSEN1-209ENST00000553855 NPTNQ9Y639 398 aa7.05□□□□□ -1.28
PSEN1-209ENST00000553855 AKAP9Q99996 3911 aa7.05□□□□□ -1.28
PSEN1-209ENST00000553855 HIVEP1P15822 2718 aa7.05□□□□□ -1.28
PSEN1-209ENST00000553855 NF1P21359 2839 aa7.04□□□□□ -1.28
PSEN1-209ENST00000553855 A0A096LNT2 108 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms