RNA–Protein interactions for RNA: ENST00000553576.5

VIPAS39-204, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-204ENST00000553576 JAGN1Q8N5M9 183 aa5.26□□□□□ -1.57
VIPAS39-204ENST00000553576 ZNF283Q8N7M2 679 aa5.26□□□□□ -1.57
VIPAS39-204ENST00000553576 ZFP62Q8NB50 900 aaPredicted RBP5.26□□□□□ -1.57
VIPAS39-204ENST00000553576 KCNG3Q8TAE7 436 aa5.26□□□□□ -1.57
VIPAS39-204ENST00000553576 PP6455Q8WZ26 134 aa5.26□□□□□ -1.57
VIPAS39-204ENST00000553576 SPTSSAQ969W0 71 aa5.26□□□□□ -1.57
VIPAS39-204ENST00000553576 LYZL4Q96KX0 146 aa5.26□□□□□ -1.57
VIPAS39-204ENST00000553576 C1orf147Q96MC9 270 aaPredicted RBP5.26□□□□□ -1.57
VIPAS39-204ENST00000553576 FAM210AQ96ND0 272 aa5.26□□□□□ -1.57
VIPAS39-204ENST00000553576 SMAD5Q99717 465 aaKnown RBP5.26□□□□□ -1.57
VIPAS39-204ENST00000553576 TTTY12Q9BZ98 90 aa5.26□□□□□ -1.57
VIPAS39-204ENST00000553576 C20orf85Q9H1P6 137 aa5.26□□□□□ -1.57
VIPAS39-204ENST00000553576 TP63Q9H3D4 680 aaPredicted RBP5.26□□□□□ -1.57
VIPAS39-204ENST00000553576 BCO1Q9HAY6 547 aa5.26□□□□□ -1.57
VIPAS39-204ENST00000553576 NOX3Q9HBY0 568 aa5.26□□□□□ -1.57
VIPAS39-204ENST00000553576 GPR35Q9HC97 309 aa5.26□□□□□ -1.57
VIPAS39-204ENST00000553576 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.26□□□□□ -1.57
VIPAS39-204ENST00000553576 PARPBPQ9NWS1 579 aa5.26□□□□□ -1.57
VIPAS39-204ENST00000553576 ZNF224Q9NZL3 707 aa5.26□□□□□ -1.57
VIPAS39-204ENST00000553576 CGGBP1Q9UFW8 167 aaPredicted RBP5.26□□□□□ -1.57
VIPAS39-204ENST00000553576 IL17BQ9UHF5 180 aa5.26□□□□□ -1.57
VIPAS39-204ENST00000553576 TIMM10BQ9Y5J6 103 aa5.26□□□□□ -1.57
VIPAS39-204ENST00000553576 GTF3C1Q12789 2109 aa5.26□□□□□ -1.57
VIPAS39-204ENST00000553576 GPR179Q6PRD1 2367 aa5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 MEIKINA0A087WXM9 373 aa5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 IGKV1-9A0A0C4DH69 117 aa5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 OR5H15A6NDH6 313 aa5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 WIPF3A6NGB9 483 aa5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 PRR33A8MZF0 331 aa5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 E9PLN8 166 aa5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 H3BSH0 61 aa5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 M0R135 149 aa5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 SGCEO43556 437 aa5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 CA11O75493 328 aa5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 KDM4BO94953 1096 aa5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 HPXP02790 462 aa5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 GSTP1P09211 210 aaKnown RBP5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 COX5BP10606 129 aa5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 PTHLHP12272 177 aa5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 ABOP16442 354 aa5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 ZNF20P17024 532 aa5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 NAT1P18440 290 aa5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 ITGA3P26006 1051 aa5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 NKX2-5P52952 324 aaPredicted RBP5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 UNC119Q13432 240 aa5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 SLC10A1Q14973 349 aa5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 ZMYND11Q15326 602 aa5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 RBMS2Q15434 407 aaKnown RBP5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 ST3GAL2Q16842 350 aa5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 PNLIPRP3Q17RR3 467 aa5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 LINC00303Q3SY05 128 aa5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 CCDC157Q569K6 752 aa5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 RNASE12Q5GAN4 147 aaKnown RBP5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 ZBTB37Q5TC79 503 aa5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 ZNF626Q68DY1 528 aa5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 TMEM42Q69YG0 159 aa5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 STEAP1BQ6NZ63 245 aa5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 MTFR2Q6P444 385 aa5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 CRIP3Q6Q6R5 217 aa5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 IGFL2Q6UWQ7 119 aa5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 NCCRP1Q6ZVX7 275 aaPredicted RBP5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 FAM57BQ71RH2 274 aa5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 SLC16A14Q7RTX9 510 aa5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 ABHD12BQ7Z5M8 362 aaPredicted RBP5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 NAA40Q86UY6 237 aa5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 TMEM251Q8N6I4 163 aa5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 OR11H7Q8NGC8 314 aa5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 OR4C16Q8NGL9 310 aa5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 OR10R2Q8NGX6 335 aa5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 OR1F12Q8NHA8 337 aa5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 ZFAND1Q8TCF1 268 aa5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 GIMAP1Q8WWP7 306 aa5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 ROBO4Q8WZ75 1007 aa5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 GCDHQ92947 438 aaPredicted RBP5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 FAM46BQ96A09 425 aa5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 SGK3Q96BR1 496 aa5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 ZNF799Q96GE5 643 aa5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 PGAM5Q96HS1 289 aa5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 RADILQ96JH8 1075 aa5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 DOCK7Q96N67 2140 aa5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 FOXB1Q99853 325 aa5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 SLC25A21Q9BQT8 299 aaPredicted RBP5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 SOX7Q9BT81 388 aa5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 GON7Q9BXV9 100 aa5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 CHST5Q9GZS9 411 aa5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 OR10A2Q9H208 303 aa5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 RGCCQ9H4X1 137 aa5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 SLA2Q9H6Q3 261 aa5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 CRLF2Q9HC73 371 aa5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 GPN1Q9HCN4 374 aaPredicted RBP5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 GP6Q9HCN6 339 aa5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 PARD6AQ9NPB6 346 aa5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 SLC2A8Q9NY64 477 aa5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 PLEK2Q9NYT0 353 aa5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 ANAPC10Q9UM13 185 aa5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 ING4Q9UNL4 249 aa5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 BDP1A6H8Y1 2624 aa5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 CFAP54Q96N23 3096 aa5.25□□□□□ -1.57
VIPAS39-204ENST00000553576 OR14I1A6ND48 311 aa5.24□□□□□ -1.57
VIPAS39-204ENST00000553576 A8MV72 311 aaPredicted RBP5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms