RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 OR5AS1Q8N127 324 aa9.87□□□□□ -0.83
CKAP4-202ENST00000552828 OR10AD1Q8NGE0 317 aa9.87□□□□□ -0.83
CKAP4-202ENST00000552828 OR10S1Q8NGN2 331 aa9.87□□□□□ -0.83
CKAP4-202ENST00000552828 ZNF420Q8TAQ5 688 aaPredicted RBP9.87□□□□□ -0.83
CKAP4-202ENST00000552828 WFDC12Q8WWY7 111 aa9.87□□□□□ -0.83
CKAP4-202ENST00000552828 SLAMF6Q96DU3 332 aa9.87□□□□□ -0.83
CKAP4-202ENST00000552828 HRASLS5Q96KN8 279 aa9.87□□□□□ -0.83
CKAP4-202ENST00000552828 ZNF582Q96NG8 517 aaPredicted RBP9.87□□□□□ -0.83
CKAP4-202ENST00000552828 ZNF184Q99676 751 aaPredicted RBP9.87□□□□□ -0.83
CKAP4-202ENST00000552828 COPS4Q9BT78 406 aa9.87□□□□□ -0.83
CKAP4-202ENST00000552828 ABHD6Q9BV23 337 aa9.87□□□□□ -0.83
CKAP4-202ENST00000552828 VCX3BQ9H321 246 aa9.87□□□□□ -0.83
CKAP4-202ENST00000552828 TOR3AQ9H497 397 aa9.87□□□□□ -0.83
CKAP4-202ENST00000552828 NOX4Q9NPH5 578 aa9.87□□□□□ -0.83
CKAP4-202ENST00000552828 C8orf4Q9NR00 106 aa9.87□□□□□ -0.83
CKAP4-202ENST00000552828 TRAV40A0A0B4J280 105 aa9.86□□□□□ -0.83
CKAP4-202ENST00000552828 MDFIC2A0A1B0GVS7 189 aa9.86□□□□□ -0.83
CKAP4-202ENST00000552828 FAM181BA6NEQ2 426 aa9.86□□□□□ -0.83
CKAP4-202ENST00000552828 CCDC182A6NF36 153 aa9.86□□□□□ -0.83
CKAP4-202ENST00000552828 IQCF6A8MYZ5 107 aa9.86□□□□□ -0.83
CKAP4-202ENST00000552828 ZNF878C9JN71 531 aa9.86□□□□□ -0.83
CKAP4-202ENST00000552828 H0YL77 283 aa9.86□□□□□ -0.83
CKAP4-202ENST00000552828 M0R135 149 aa9.86□□□□□ -0.83
CKAP4-202ENST00000552828 NDUFA7O95182 113 aa9.86□□□□□ -0.83
CKAP4-202ENST00000552828 ZNF205O95201 554 aa9.86□□□□□ -0.83
CKAP4-202ENST00000552828 LCATP04180 440 aa9.86□□□□□ -0.83
CKAP4-202ENST00000552828 ACSM4P0C7M7 580 aa9.86□□□□□ -0.83
CKAP4-202ENST00000552828 OMGP23515 440 aa9.86□□□□□ -0.83
CKAP4-202ENST00000552828 NAA10P41227 235 aaPredicted RBP9.86□□□□□ -0.83
CKAP4-202ENST00000552828 PITPNBP48739 271 aa9.86□□□□□ -0.83
CKAP4-202ENST00000552828 GRB2P62993 217 aaKnown RBP9.86□□□□□ -0.83
CKAP4-202ENST00000552828 DEFB112Q30KQ8 113 aa9.86□□□□□ -0.83
CKAP4-202ENST00000552828 Q6YL49 198 aa9.86□□□□□ -0.83
CKAP4-202ENST00000552828 ZNF841Q6ZN19 808 aa9.86□□□□□ -0.83
CKAP4-202ENST00000552828 COLCA1Q6ZS62 124 aa9.86□□□□□ -0.83
CKAP4-202ENST00000552828 RHOUQ7L0Q8 258 aa9.86□□□□□ -0.83
CKAP4-202ENST00000552828 NLRC3Q7RTR2 1065 aa9.86□□□□□ -0.83
CKAP4-202ENST00000552828 SLC16A9Q7RTY1 509 aa9.86□□□□□ -0.83
CKAP4-202ENST00000552828 BCDIN3DQ7Z5W3 292 aaKnown RBP9.86□□□□□ -0.83
CKAP4-202ENST00000552828 MOGAT3Q86VF5 341 aa9.86□□□□□ -0.83
CKAP4-202ENST00000552828 C1orf87Q8N0U7 546 aa9.86□□□□□ -0.83
CKAP4-202ENST00000552828 TMEM86BQ8N661 226 aa9.86□□□□□ -0.83
CKAP4-202ENST00000552828 CELF2-AS1Q8N7Q2 184 aa9.86□□□□□ -0.83
CKAP4-202ENST00000552828 OR8B3Q8NGG8 313 aa9.86□□□□□ -0.83
CKAP4-202ENST00000552828 OTOSQ8NHW6 89 aa9.86□□□□□ -0.83
CKAP4-202ENST00000552828 FAM81AQ8TBF8 368 aa9.86□□□□□ -0.83
CKAP4-202ENST00000552828 Q8TCH9 128 aa9.86□□□□□ -0.83
CKAP4-202ENST00000552828 THEM6Q8WUY1 208 aa9.86□□□□□ -0.83
CKAP4-202ENST00000552828 RNF133Q8WVZ7 376 aa9.86□□□□□ -0.83
CKAP4-202ENST00000552828 ERGIC1Q969X5 290 aa9.86□□□□□ -0.83
CKAP4-202ENST00000552828 ZNF799Q96GE5 643 aa9.86□□□□□ -0.83
CKAP4-202ENST00000552828 RDH12Q96NR8 316 aa9.86□□□□□ -0.83
CKAP4-202ENST00000552828 OR8B2Q96RD0 313 aa9.86□□□□□ -0.83
CKAP4-202ENST00000552828 MBOAT4Q96T53 435 aa9.86□□□□□ -0.83
CKAP4-202ENST00000552828 KCNJ15Q99712 375 aa9.86□□□□□ -0.83
CKAP4-202ENST00000552828 NUDT16L1Q9BRJ7 211 aaKnown RBP9.86□□□□□ -0.83
CKAP4-202ENST00000552828 YIPF3Q9GZM5 350 aa9.86□□□□□ -0.83
CKAP4-202ENST00000552828 VCXQ9H320 206 aa9.86□□□□□ -0.83
CKAP4-202ENST00000552828 BEX1Q9HBH7 125 aa9.86□□□□□ -0.83
CKAP4-202ENST00000552828 PTTG3PQ9NZH4 202 aa9.86□□□□□ -0.83
CKAP4-202ENST00000552828 GMPPBQ9Y5P6 360 aa9.86□□□□□ -0.83
CKAP4-202ENST00000552828 A0A0G2JK05 382 aa9.85□□□□□ -0.83
CKAP4-202ENST00000552828 MAGEA13PA6NCF6 341 aa9.85□□□□□ -0.83
CKAP4-202ENST00000552828 E9PQ18 207 aa9.85□□□□□ -0.83
CKAP4-202ENST00000552828 F5H5P2 479 aa9.85□□□□□ -0.83
CKAP4-202ENST00000552828 PHYHO14832 338 aa9.85□□□□□ -0.83
CKAP4-202ENST00000552828 APOC1P02654 83 aa9.85□□□□□ -0.83
CKAP4-202ENST00000552828 LYNP07948 512 aa9.85□□□□□ -0.83
CKAP4-202ENST00000552828 HSD11B1P28845 292 aa9.85□□□□□ -0.83
CKAP4-202ENST00000552828 OTX1P32242 354 aaPredicted RBP9.85□□□□□ -0.83
CKAP4-202ENST00000552828 PSMB10P40306 273 aa9.85□□□□□ -0.83
CKAP4-202ENST00000552828 PRKXP51817 358 aa9.85□□□□□ -0.83
CKAP4-202ENST00000552828 MALLQ13021 153 aa9.85□□□□□ -0.83
CKAP4-202ENST00000552828 LRRC36Q1X8D7 754 aa9.85□□□□□ -0.83
CKAP4-202ENST00000552828 LPCAT4Q643R3 524 aa9.85□□□□□ -0.83
CKAP4-202ENST00000552828 WDR25Q64LD2 544 aaPredicted RBP9.85□□□□□ -0.83
CKAP4-202ENST00000552828 DRAM2Q6UX65 266 aa9.85□□□□□ -0.83
CKAP4-202ENST00000552828 BRD3OSQ6XYD6 125 aa9.85□□□□□ -0.83
CKAP4-202ENST00000552828 DCDC5Q6ZRR9 648 aa9.85□□□□□ -0.83
CKAP4-202ENST00000552828 NAA40Q86UY6 237 aa9.85□□□□□ -0.83
CKAP4-202ENST00000552828 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.85□□□□□ -0.83
CKAP4-202ENST00000552828 GALNT4Q8N4A0 578 aa9.85□□□□□ -0.83
CKAP4-202ENST00000552828 PACRGLQ8N7B6 248 aa9.85□□□□□ -0.83
CKAP4-202ENST00000552828 OR4F5Q8NH21 305 aa9.85□□□□□ -0.83
CKAP4-202ENST00000552828 RFKQ969G6 155 aa9.85□□□□□ -0.83
CKAP4-202ENST00000552828 CNN2Q99439 309 aaKnown RBP9.85□□□□□ -0.83
CKAP4-202ENST00000552828 CITED1Q99966 193 aa9.85□□□□□ -0.83
CKAP4-202ENST00000552828 TMEM100Q9NV29 134 aa9.85□□□□□ -0.83
CKAP4-202ENST00000552828 SMPD3Q9NY59 655 aaPredicted RBP9.85□□□□□ -0.83
CKAP4-202ENST00000552828 HAO2Q9NYQ3 351 aa9.85□□□□□ -0.83
CKAP4-202ENST00000552828 CLN8Q9UBY8 286 aa9.85□□□□□ -0.83
CKAP4-202ENST00000552828 WARS2Q9UGM6 360 aaKnown RBP9.85□□□□□ -0.83
CKAP4-202ENST00000552828 LAMP5Q9UJQ1 280 aa9.85□□□□□ -0.83
CKAP4-202ENST00000552828 TMEM14AQ9Y6G1 99 aa9.85□□□□□ -0.83
CKAP4-202ENST00000552828 LOC100130705A0A1B0GUX0 176 aa9.84□□□□□ -0.83
CKAP4-202ENST00000552828 TNFRSF13BO14836 293 aaPredicted RBP9.84□□□□□ -0.83
CKAP4-202ENST00000552828 CASQ2O14958 399 aaPredicted RBP9.84□□□□□ -0.83
CKAP4-202ENST00000552828 MPZL2O60487 215 aa9.84□□□□□ -0.83
CKAP4-202ENST00000552828 KNG1P01042 644 aa9.84□□□□□ -0.83
CKAP4-202ENST00000552828 MRPL3P09001 348 aaKnown RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms