RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 LINC01590Q5TEZ4 76 aa4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 ASPHD2Q6ICH7 369 aa4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 TANGO2Q6ICL3 276 aa4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 RPUSD3Q6P087 351 aaKnown RBP4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 TEPPQ6URK8 271 aa4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 SLC24A5Q71RS6 500 aa4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 SMIM15Q7Z3B0 74 aa4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 TMEM150AQ86TG1 271 aa4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 ADIPOR2Q86V24 386 aa4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 C17orf64Q86WR6 236 aa4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 WDFY1Q8IWB7 410 aa4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 SLC35F2Q8IXU6 374 aa4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 CLEC18CQ8NCF0 446 aa4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 ADAD2Q8NCV1 583 aaKnown RBP4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 PLPP5Q8NEB5 264 aa4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 KLHDC9Q8NEP7 349 aa4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 OR5T1Q8NG75 326 aa4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 OR51F2Q8NH61 342 aa4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 ZNF563Q8TA94 476 aa4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 ADAMTS15Q8TE58 950 aa4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 TMEM170AQ8WVE7 144 aa4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 OIT3Q8WWZ8 545 aa4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 TNFRSF14Q92956 283 aa4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 TVP23CQ96ET8 276 aa4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 C16orf58Q96GQ5 468 aa4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 SPATA33Q96N06 139 aa4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 CD180Q99467 661 aa4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 NKX3-1Q99801 234 aaPredicted RBP4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 PDCD1LG2Q9BQ51 273 aa4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 EFCAB11Q9BUY7 163 aa4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 PBDC1Q9BVG4 233 aa4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 CSTL1Q9H114 145 aa4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 NELFAQ9H3P2 528 aa4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 RBKSQ9H477 322 aa4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 WFDC1Q9HC57 220 aa4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 SERINC1Q9NRX5 453 aa4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 LUZP4Q9P127 313 aa4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 TUBD1Q9UJT1 453 aa4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 KLK13Q9UKR3 277 aa4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 GPR132Q9UNW8 380 aa4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 TMED7Q9Y3B3 224 aa4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 YIPF1Q9Y548 306 aa4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 CKAP5Q14008 2032 aa4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 TRAV1-1A0A0B4J248 108 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 IGHV2-70DA0A0C4DH43 119 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 A0A1B0GU03 582 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 MBLAC1A4D2B0 266 aaPredicted RBP4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 ZNF860A6NHJ4 632 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 FAM90A27PA6NNH2 459 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 HSPB2A8KAH6 182 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 AHRRA9YTQ3 701 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 K7EPK0 472 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 M0QYG6 137 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 CYR61O00622 381 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 SYNGR4O95473 234 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 ERCC1P07992 297 aaPredicted RBP4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 MRPL3P09001 348 aaKnown RBP4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 CST2P09228 141 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 CLTBP09497 229 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 CTXN2P0C2S0 81 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 ESDP10768 282 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 F3P13726 295 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 NPPBP16860 134 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 FAHP16930 419 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 IGFBP3P17936 291 aaPredicted RBP4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 PI3P19957 117 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 RPS4Y1P22090 263 aaKnown RBP4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 IMPA1P29218 277 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 GJA4P35212 333 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 TAGLN2P37802 199 aaKnown RBP4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 ADCYAP1R1P41586 468 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 RAB7AP51149 207 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 LINC00310P59036 64 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 TRA2BP62995 288 aaKnown RBP4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 SUPT4H1P63272 117 aaKnown RBP4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 IL13RA1P78552 427 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 ARF5P84085 180 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 RHOGP84095 191 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 COL10A1Q03692 680 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 ZNF117Q03924 483 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 PMS2P11Q13670 270 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 ICAM4Q14773 271 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 HSPB2Q16082 182 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 ATP6V1FQ16864 119 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 ZNF260Q3ZCT1 412 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 PDZD11Q5EBL8 140 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 VAX1Q5SQQ9 334 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 C1orf100Q5SVJ3 147 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 FAM151BQ6UXP7 276 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 WDR88Q6ZMY6 472 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 CHST9Q7L1S5 443 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 GRINAQ7Z429 371 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 MDGA2Q7Z553 956 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 LHFPL1Q86WI0 220 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 FAM219AQ8IW50 185 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 FAM71E2Q8N5Q1 922 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 C11orf42Q8N5U0 333 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms