RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 MAFIPQ8WZ33 124 aa12.15□□□□□ -0.46
HDAC7-228ENST00000548938 ARHGAP5-AS1Q96IT6 56 aa12.15□□□□□ -0.46
HDAC7-228ENST00000548938 PARP11Q9NR21 331 aa12.15□□□□□ -0.46
HDAC7-228ENST00000548938 DCAF16Q9NXF7 216 aa12.15□□□□□ -0.46
HDAC7-228ENST00000548938 FTCDNL1E5RQL4 147 aa12.15□□□□□ -0.47
HDAC7-228ENST00000548938 NPIPA5E9PKD4 350 aa12.15□□□□□ -0.47
HDAC7-228ENST00000548938 TSPAN2O60636 221 aa12.15□□□□□ -0.47
HDAC7-228ENST00000548938 CDC14BO60729 498 aa12.15□□□□□ -0.47
HDAC7-228ENST00000548938 GSTP1P09211 210 aaKnown RBP12.15□□□□□ -0.47
HDAC7-228ENST00000548938 AMY2BP19961 511 aa12.15□□□□□ -0.47
HDAC7-228ENST00000548938 EIF5AP63241 154 aaKnown RBP12.15□□□□□ -0.47
HDAC7-228ENST00000548938 FOXK1P85037 733 aa12.15□□□□□ -0.47
HDAC7-228ENST00000548938 SPEM2Q0P670 501 aa12.15□□□□□ -0.47
HDAC7-228ENST00000548938 AWAT1Q58HT5 328 aa12.15□□□□□ -0.47
HDAC7-228ENST00000548938 ZNF529Q6P280 563 aa12.15□□□□□ -0.47
HDAC7-228ENST00000548938 DNM1P34Q6PK57 102 aa12.15□□□□□ -0.47
HDAC7-228ENST00000548938 OR10S1Q8NGN2 331 aa12.15□□□□□ -0.47
HDAC7-228ENST00000548938 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.15□□□□□ -0.47
HDAC7-228ENST00000548938 SMIM3Q9BZL3 60 aa12.15□□□□□ -0.47
HDAC7-228ENST00000548938 NPIPA1Q9UND3 350 aa12.15□□□□□ -0.47
HDAC7-228ENST00000548938 GON4LQ3T8J9 2241 aa12.14□□□□□ -0.47
HDAC7-228ENST00000548938 MS4A18H0YCH9 400 aa12.14□□□□□ -0.47
HDAC7-228ENST00000548938 CHRM2P08172 466 aa12.14□□□□□ -0.47
HDAC7-228ENST00000548938 SNRNP70P08621 437 aaKnown RBP12.14□□□□□ -0.47
HDAC7-228ENST00000548938 ZNF708P17019 499 aa12.14□□□□□ -0.47
HDAC7-228ENST00000548938 ZNF20P17024 532 aa12.14□□□□□ -0.47
HDAC7-228ENST00000548938 AGAP20933 346 aa12.14□□□□□ -0.47
HDAC7-228ENST00000548938 OR1D4P47884 311 aa12.14□□□□□ -0.47
HDAC7-228ENST00000548938 EFNA3P52797 238 aa12.14□□□□□ -0.47
HDAC7-228ENST00000548938 POU3F1Q03052 451 aaPredicted RBP12.14□□□□□ -0.47
HDAC7-228ENST00000548938 SMAD4Q13485 552 aaKnown RBP12.14□□□□□ -0.47
HDAC7-228ENST00000548938 TDGQ13569 410 aa12.14□□□□□ -0.47
HDAC7-228ENST00000548938 MS4A18Q3C1V0 323 aa12.14□□□□□ -0.47
HDAC7-228ENST00000548938 ACTBL2Q562R1 376 aa12.14□□□□□ -0.47
HDAC7-228ENST00000548938 KLHL24Q6TFL4 600 aa12.14□□□□□ -0.47
HDAC7-228ENST00000548938 Q7L0L9 218 aa12.14□□□□□ -0.47
HDAC7-228ENST00000548938 GRINAQ7Z429 371 aa12.14□□□□□ -0.47
HDAC7-228ENST00000548938 LHFPL1Q86WI0 220 aa12.14□□□□□ -0.47
HDAC7-228ENST00000548938 OR5AS1Q8N127 324 aa12.14□□□□□ -0.47
HDAC7-228ENST00000548938 PNLDC1Q8NA58 520 aaKnown RBP12.14□□□□□ -0.47
HDAC7-228ENST00000548938 ZNF248Q8NDW4 579 aa12.14□□□□□ -0.47
HDAC7-228ENST00000548938 C11orf40Q8WZ69 217 aa12.14□□□□□ -0.47
HDAC7-228ENST00000548938 OR5B2Q96R09 309 aa12.14□□□□□ -0.47
HDAC7-228ENST00000548938 KCNK17Q96T54 332 aa12.14□□□□□ -0.47
HDAC7-228ENST00000548938 SEBOXQ9HB31 216 aaPredicted RBP12.14□□□□□ -0.47
HDAC7-228ENST00000548938 GHRLQ9UBU3 117 aa12.14□□□□□ -0.47
HDAC7-228ENST00000548938 FBXL17Q9UF56 701 aa12.14□□□□□ -0.47
HDAC7-228ENST00000548938 KPTNQ9Y664 436 aa12.14□□□□□ -0.47
HDAC7-228ENST00000548938 PHF3Q92576 2039 aaKnown RBP12.14□□□□□ -0.47
HDAC7-228ENST00000548938 A0A1W2PPH5 198 aa12.14□□□□□ -0.47
HDAC7-228ENST00000548938 TMEM150CB9EJG8 249 aa12.14□□□□□ -0.47
HDAC7-228ENST00000548938 EIF1BO60739 113 aaKnown RBP12.14□□□□□ -0.47
HDAC7-228ENST00000548938 SLC2A1P11166 492 aa12.14□□□□□ -0.47
HDAC7-228ENST00000548938 DAOP14920 347 aa12.14□□□□□ -0.47
HDAC7-228ENST00000548938 ANOS1P23352 680 aa12.14□□□□□ -0.47
HDAC7-228ENST00000548938 EIF1P41567 113 aaKnown RBP12.14□□□□□ -0.47
HDAC7-228ENST00000548938 GABRA4P48169 554 aa12.14□□□□□ -0.47
HDAC7-228ENST00000548938 PPM1FP49593 454 aaPredicted RBP12.14□□□□□ -0.47
HDAC7-228ENST00000548938 ARFRP1Q13795 201 aa12.14□□□□□ -0.47
HDAC7-228ENST00000548938 DMRTC1Q5HYR2 192 aa12.14□□□□□ -0.47
HDAC7-228ENST00000548938 COMMD2Q86X83 199 aa12.14□□□□□ -0.47
HDAC7-228ENST00000548938 TCTN2Q96GX1 697 aa12.14□□□□□ -0.47
HDAC7-228ENST00000548938 ARL5BQ96KC2 179 aa12.14□□□□□ -0.47
HDAC7-228ENST00000548938 IP6K3Q96PC2 410 aa12.14□□□□□ -0.47
HDAC7-228ENST00000548938 ST6GALNAC5Q9BVH7 336 aa12.14□□□□□ -0.47
HDAC7-228ENST00000548938 TMEM59Q9BXS4 323 aa12.14□□□□□ -0.47
HDAC7-228ENST00000548938 SLC2A4RGQ9NR83 387 aa12.14□□□□□ -0.47
HDAC7-228ENST00000548938 SOHLH2Q9NX45 425 aa12.14□□□□□ -0.47
HDAC7-228ENST00000548938 OSGIN2Q9Y236 505 aa12.14□□□□□ -0.47
HDAC7-228ENST00000548938 A0A1W2PQD3 144 aa12.13□□□□□ -0.47
HDAC7-228ENST00000548938 A6NIZ1 184 aa12.13□□□□□ -0.47
HDAC7-228ENST00000548938 TAAR5O14804 337 aa12.13□□□□□ -0.47
HDAC7-228ENST00000548938 CST4P01036 141 aa12.13□□□□□ -0.47
HDAC7-228ENST00000548938 CTSEP14091 401 aa12.13□□□□□ -0.47
HDAC7-228ENST00000548938 ZNF14P17017 642 aaPredicted RBP12.13□□□□□ -0.47
HDAC7-228ENST00000548938 ADH6P28332 368 aa12.13□□□□□ -0.47
HDAC7-228ENST00000548938 RAP1BP61224 184 aa12.13□□□□□ -0.47
HDAC7-228ENST00000548938 RAP1AP62834 184 aa12.13□□□□□ -0.47
HDAC7-228ENST00000548938 TSC22D1Q15714 1073 aa12.13□□□□□ -0.47
HDAC7-228ENST00000548938 KRBOX4Q5JUW0 171 aa12.13□□□□□ -0.47
HDAC7-228ENST00000548938 C20orf24Q9BUV8 137 aa12.13□□□□□ -0.47
HDAC7-228ENST00000548938 PHF7Q9BWX1 381 aaPredicted RBP12.13□□□□□ -0.47
HDAC7-228ENST00000548938 UBE2ZQ9H832 354 aaPredicted RBP12.13□□□□□ -0.47
HDAC7-228ENST00000548938 MIOXQ9UGB7 285 aa12.13□□□□□ -0.47
HDAC7-228ENST00000548938 SRPK3Q9UPE1 567 aa12.13□□□□□ -0.47
HDAC7-228ENST00000548938 SEC16AO15027 2179 aa12.13□□□□□ -0.47
HDAC7-228ENST00000548938 RP1P56715 2156 aa12.13□□□□□ -0.47
HDAC7-228ENST00000548938 hCG_1809904A0A1W2PP81 198 aa12.13□□□□□ -0.47
HDAC7-228ENST00000548938 A0A1W2PR64 198 aa12.13□□□□□ -0.47
HDAC7-228ENST00000548938 A0A1W2PRV1 198 aa12.13□□□□□ -0.47
HDAC7-228ENST00000548938 KNG1P01042 644 aa12.13□□□□□ -0.47
HDAC7-228ENST00000548938 MT-ND4LP03901 98 aa12.13□□□□□ -0.47
HDAC7-228ENST00000548938 BTF3P20290 206 aaKnown RBP12.13□□□□□ -0.47
HDAC7-228ENST00000548938 RPL12P30050 165 aaKnown RBP12.13□□□□□ -0.47
HDAC7-228ENST00000548938 HLA-DQA1Q5Y7H0 255 aa12.13□□□□□ -0.47
HDAC7-228ENST00000548938 ZNF600Q6ZNG1 722 aa12.13□□□□□ -0.47
HDAC7-228ENST00000548938 ZNF561Q8N587 486 aa12.13□□□□□ -0.47
HDAC7-228ENST00000548938 OR10H5Q8NGA6 315 aa12.13□□□□□ -0.47
HDAC7-228ENST00000548938 EMC6Q9BV81 110 aa12.13□□□□□ -0.47
HDAC7-228ENST00000548938 EHFQ9NZC4 300 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms