RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 KLHL12Q53G59 568 aa11.63□□□□□ -0.55
PTCH1-217ENST00000548420 CASC10Q5T4H9 136 aa11.63□□□□□ -0.55
PTCH1-217ENST00000548420 AADACL4Q5VUY2 407 aa11.63□□□□□ -0.55
PTCH1-217ENST00000548420 PGAP1Q75T13 922 aa11.63□□□□□ -0.55
PTCH1-217ENST00000548420 C10orf67Q8IYJ2 551 aa11.63□□□□□ -0.55
PTCH1-217ENST00000548420 OR5AS1Q8N127 324 aa11.63□□□□□ -0.55
PTCH1-217ENST00000548420 ZNF283Q8N7M2 679 aa11.63□□□□□ -0.55
PTCH1-217ENST00000548420 CCL17Q92583 94 aa11.63□□□□□ -0.55
PTCH1-217ENST00000548420 CIB1Q99828 191 aa11.63□□□□□ -0.55
PTCH1-217ENST00000548420 GABARAPL3Q9BY60 117 aa11.63□□□□□ -0.55
PTCH1-217ENST00000548420 YIPF3Q9GZM5 350 aa11.63□□□□□ -0.55
PTCH1-217ENST00000548420 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.63□□□□□ -0.55
PTCH1-217ENST00000548420 ENOPH1Q9UHY7 261 aa11.63□□□□□ -0.55
PTCH1-217ENST00000548420 WIPI2Q9Y4P8 454 aa11.63□□□□□ -0.55
PTCH1-217ENST00000548420 CLDN25C9JDP6 229 aa11.62□□□□□ -0.55
PTCH1-217ENST00000548420 E9PQ18 207 aa11.62□□□□□ -0.55
PTCH1-217ENST00000548420 APOC1P02654 83 aa11.62□□□□□ -0.55
PTCH1-217ENST00000548420 LYNP07948 512 aa11.62□□□□□ -0.55
PTCH1-217ENST00000548420 TNFRSF1AP19438 455 aa11.62□□□□□ -0.55
PTCH1-217ENST00000548420 POLR2IP36954 125 aaKnown RBP11.62□□□□□ -0.55
PTCH1-217ENST00000548420 SLC6A9P48067 706 aa11.62□□□□□ -0.55
PTCH1-217ENST00000548420 SLC3A1Q07837 685 aa11.62□□□□□ -0.55
PTCH1-217ENST00000548420 PDCD1Q15116 288 aa11.62□□□□□ -0.55
PTCH1-217ENST00000548420 TAF13Q15543 124 aa11.62□□□□□ -0.55
PTCH1-217ENST00000548420 GLYATL3Q5SZD4 288 aa11.62□□□□□ -0.55
PTCH1-217ENST00000548420 SLC16A9Q7RTY1 509 aa11.62□□□□□ -0.55
PTCH1-217ENST00000548420 ITLN1Q8WWA0 313 aa11.62□□□□□ -0.55
PTCH1-217ENST00000548420 ITPKCQ96DU7 683 aa11.62□□□□□ -0.55
PTCH1-217ENST00000548420 OR2V2Q96R30 315 aa11.62□□□□□ -0.55
PTCH1-217ENST00000548420 PRRG3Q9BZD7 231 aa11.62□□□□□ -0.55
PTCH1-217ENST00000548420 GCM1Q9NP62 436 aa11.62□□□□□ -0.55
PTCH1-217ENST00000548420 TMEM100Q9NV29 134 aa11.62□□□□□ -0.55
PTCH1-217ENST00000548420 CD300LBA8K4G0 201 aa11.61□□□□□ -0.55
PTCH1-217ENST00000548420 PLATP00750 562 aa11.61□□□□□ -0.55
PTCH1-217ENST00000548420 ALPLP05186 524 aa11.61□□□□□ -0.55
PTCH1-217ENST00000548420 ZNF12P17014 697 aa11.61□□□□□ -0.55
PTCH1-217ENST00000548420 GATA4P43694 442 aa11.61□□□□□ -0.55
PTCH1-217ENST00000548420 PRSS12P56730 875 aa11.61□□□□□ -0.55
PTCH1-217ENST00000548420 DEFB121Q5J5C9 76 aa11.61□□□□□ -0.55
PTCH1-217ENST00000548420 NXNL2Q5VZ03 156 aa11.61□□□□□ -0.55
PTCH1-217ENST00000548420 DEGS2Q6QHC5 323 aa11.61□□□□□ -0.55
PTCH1-217ENST00000548420 MEPCEQ7L2J0 689 aaKnown RBP11.61□□□□□ -0.55
PTCH1-217ENST00000548420 CELF2-AS1Q8N7Q2 184 aa11.61□□□□□ -0.55
PTCH1-217ENST00000548420 TCEANCQ8N8B7 351 aa11.61□□□□□ -0.55
PTCH1-217ENST00000548420 OR2AE1Q8NHA4 323 aa11.61□□□□□ -0.55
PTCH1-217ENST00000548420 TMEM163Q8TC26 289 aa11.61□□□□□ -0.55
PTCH1-217ENST00000548420 THEM6Q8WUY1 208 aa11.61□□□□□ -0.55
PTCH1-217ENST00000548420 RAB1CQ92928 201 aa11.61□□□□□ -0.55
PTCH1-217ENST00000548420 SGK3Q96BR1 496 aa11.61□□□□□ -0.55
PTCH1-217ENST00000548420 MEGF10Q96KG7 1140 aa11.61□□□□□ -0.55
PTCH1-217ENST00000548420 SIGLEC11Q96RL6 698 aa11.61□□□□□ -0.55
PTCH1-217ENST00000548420 OPA3Q9H6K4 179 aa11.61□□□□□ -0.55
PTCH1-217ENST00000548420 SP140LQ9H930 580 aa11.61□□□□□ -0.55
PTCH1-217ENST00000548420 TMEM106BQ9NUM4 274 aa11.61□□□□□ -0.55
PTCH1-217ENST00000548420 DCAF16Q9NXF7 216 aa11.61□□□□□ -0.55
PTCH1-217ENST00000548420 HAO2Q9NYQ3 351 aa11.61□□□□□ -0.55
PTCH1-217ENST00000548420 USE1Q9NZ43 259 aa11.61□□□□□ -0.55
PTCH1-217ENST00000548420 ZNF319Q9P2F9 582 aa11.61□□□□□ -0.55
PTCH1-217ENST00000548420 KLHDC2Q9Y2U9 406 aa11.61□□□□□ -0.55
PTCH1-217ENST00000548420 SAC3D1A6NKF1 404 aa11.6□□□□□ -0.55
PTCH1-217ENST00000548420 IFNL4K9M1U5 179 aa11.6□□□□□ -0.55
PTCH1-217ENST00000548420 XRCC2O43543 280 aa11.6□□□□□ -0.55
PTCH1-217ENST00000548420 PTBP3O95758 552 aaKnown RBP11.6□□□□□ -0.55
PTCH1-217ENST00000548420 IGHV2-70P01814 119 aa11.6□□□□□ -0.55
PTCH1-217ENST00000548420 SLC2A1P11166 492 aa11.6□□□□□ -0.55
PTCH1-217ENST00000548420 DDOSTP39656 456 aa11.6□□□□□ -0.55
PTCH1-217ENST00000548420 NAA10P41227 235 aaPredicted RBP11.6□□□□□ -0.55
PTCH1-217ENST00000548420 CX3CR1P49238 355 aa11.6□□□□□ -0.55
PTCH1-217ENST00000548420 HCCSP53701 268 aa11.6□□□□□ -0.55
PTCH1-217ENST00000548420 CD69Q07108 199 aa11.6□□□□□ -0.55
PTCH1-217ENST00000548420 MAB21L1Q13394 359 aa11.6□□□□□ -0.55
PTCH1-217ENST00000548420 ZNF181Q2M3W8 571 aa11.6□□□□□ -0.55
PTCH1-217ENST00000548420 MRPL21Q7Z2W9 205 aaKnown RBP11.6□□□□□ -0.55
PTCH1-217ENST00000548420 BCDIN3DQ7Z5W3 292 aaKnown RBP11.6□□□□□ -0.55
PTCH1-217ENST00000548420 BHLHE23Q8NDY6 225 aa11.6□□□□□ -0.55
PTCH1-217ENST00000548420 OR10AD1Q8NGE0 317 aa11.6□□□□□ -0.55
PTCH1-217ENST00000548420 OR52H1Q8NGJ2 320 aa11.6□□□□□ -0.55
PTCH1-217ENST00000548420 TIMD4Q96H15 378 aa11.6□□□□□ -0.55
PTCH1-217ENST00000548420 SLC22A4Q9H015 551 aa11.6□□□□□ -0.55
PTCH1-217ENST00000548420 NIPAL2Q9H841 368 aa11.6□□□□□ -0.55
PTCH1-217ENST00000548420 PPP1R3CQ9UQK1 317 aa11.6□□□□□ -0.55
PTCH1-217ENST00000548420 INSIG2Q9Y5U4 225 aa11.6□□□□□ -0.55
PTCH1-217ENST00000548420 NPTNQ9Y639 398 aa11.6□□□□□ -0.55
PTCH1-217ENST00000548420 WI2-2373I1.2A0A1W2PRP0 233 aa11.59□□□□□ -0.55
PTCH1-217ENST00000548420 F5H5P2 479 aa11.59□□□□□ -0.55
PTCH1-217ENST00000548420 TMEM178BH3BS89 294 aa11.59□□□□□ -0.55
PTCH1-217ENST00000548420 M0R129 80 aa11.59□□□□□ -0.55
PTCH1-217ENST00000548420 GMDSO60547 372 aa11.59□□□□□ -0.55
PTCH1-217ENST00000548420 FSTL3O95633 263 aa11.59□□□□□ -0.55
PTCH1-217ENST00000548420 HLA-DPB1P04440 258 aa11.59□□□□□ -0.55
PTCH1-217ENST00000548420 H2BFMP0C1H6 154 aa11.59□□□□□ -0.55
PTCH1-217ENST00000548420 HSD11B1P28845 292 aa11.59□□□□□ -0.55
PTCH1-217ENST00000548420 DCTDP32321 178 aa11.59□□□□□ -0.55
PTCH1-217ENST00000548420 PMELP40967 661 aa11.59□□□□□ -0.55
PTCH1-217ENST00000548420 CD200P41217 278 aa11.59□□□□□ -0.55
PTCH1-217ENST00000548420 SRP9P49458 86 aaKnown RBP11.59□□□□□ -0.55
PTCH1-217ENST00000548420 ZNF121P58317 390 aaPredicted RBP11.59□□□□□ -0.55
PTCH1-217ENST00000548420 RPS7P62081 194 aaKnown RBP11.59□□□□□ -0.55
PTCH1-217ENST00000548420 FAM3AP98173 230 aa11.59□□□□□ -0.55
PTCH1-217ENST00000548420 ROM1Q03395 351 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms