RNA–Protein interactions for RNA: ENST00000548263.5

CALCOCO1-210, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best) BASIC

Gene CALCOCO1, Length 3,888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-210ENST00000548263 MR1Q95460 341 aa8.47□□□□□ -1.05
CALCOCO1-210ENST00000548263 C8orf44Q96CB5 159 aa8.47□□□□□ -1.05
CALCOCO1-210ENST00000548263 KIRREL1Q96J84 757 aa8.47□□□□□ -1.05
CALCOCO1-210ENST00000548263 USB1Q9BQ65 265 aaKnown RBP8.47□□□□□ -1.05
CALCOCO1-210ENST00000548263 NMNAT2Q9BZQ4 307 aa8.47□□□□□ -1.05
CALCOCO1-210ENST00000548263 CHRDQ9H2X0 955 aa8.47□□□□□ -1.05
CALCOCO1-210ENST00000548263 NXT1Q9UKK6 140 aaKnown RBP8.47□□□□□ -1.05
CALCOCO1-210ENST00000548263 SLC7A11Q9UPY5 501 aa8.47□□□□□ -1.05
CALCOCO1-210ENST00000548263 PRRC2CQ9Y520 2896 aaKnown RBP8.47□□□□□ -1.05
CALCOCO1-210ENST00000548263 UMAD1C9J7I0 102 aa8.47□□□□□ -1.05
CALCOCO1-210ENST00000548263 IFNA4P05014 189 aa8.47□□□□□ -1.05
CALCOCO1-210ENST00000548263 CDAP32320 146 aa8.47□□□□□ -1.05
CALCOCO1-210ENST00000548263 CSNK1A1P48729 337 aa8.47□□□□□ -1.05
CALCOCO1-210ENST00000548263 HOXA1P49639 335 aaPredicted RBP8.47□□□□□ -1.05
CALCOCO1-210ENST00000548263 NDUFA6P56556 154 aa8.47□□□□□ -1.05
CALCOCO1-210ENST00000548263 SKP2Q13309 424 aa8.47□□□□□ -1.05
CALCOCO1-210ENST00000548263 HMGN3Q15651 99 aa8.47□□□□□ -1.05
CALCOCO1-210ENST00000548263 LYSMD4Q5XG99 296 aa8.47□□□□□ -1.05
CALCOCO1-210ENST00000548263 C5orf46Q6UWT4 87 aa8.47□□□□□ -1.05
CALCOCO1-210ENST00000548263 CPEB2Q7Z5Q1 589 aaKnown RBP8.47□□□□□ -1.05
CALCOCO1-210ENST00000548263 LDLRAD3Q86YD5 345 aa8.47□□□□□ -1.05
CALCOCO1-210ENST00000548263 ZNF695Q8IW36 515 aa8.47□□□□□ -1.05
CALCOCO1-210ENST00000548263 ISOC2Q96AB3 205 aa8.47□□□□□ -1.05
CALCOCO1-210ENST00000548263 PIK3IP1Q96FE7 263 aa8.47□□□□□ -1.05
CALCOCO1-210ENST00000548263 REG4Q9BYZ8 158 aa8.47□□□□□ -1.05
CALCOCO1-210ENST00000548263 CHST11Q9NPF2 352 aa8.47□□□□□ -1.05
CALCOCO1-210ENST00000548263 CTSFQ9UBX1 484 aa8.47□□□□□ -1.05
CALCOCO1-210ENST00000548263 PCDHGA1Q9Y5H4 931 aa8.47□□□□□ -1.05
CALCOCO1-210ENST00000548263 MPDZO75970 2070 aa8.47□□□□□ -1.05
CALCOCO1-210ENST00000548263 TRBV5-7A0A0A0MS05 114 aa8.47□□□□□ -1.05
CALCOCO1-210ENST00000548263 TRBV11-1A0A0K0K1C0 115 aa8.47□□□□□ -1.05
CALCOCO1-210ENST00000548263 TLCD2A6NGC4 264 aa8.47□□□□□ -1.05
CALCOCO1-210ENST00000548263 TAAR5O14804 337 aa8.47□□□□□ -1.05
CALCOCO1-210ENST00000548263 GSTP1P09211 210 aaKnown RBP8.47□□□□□ -1.05
CALCOCO1-210ENST00000548263 DAOP14920 347 aa8.47□□□□□ -1.05
CALCOCO1-210ENST00000548263 RFC3P40938 356 aa8.47□□□□□ -1.05
CALCOCO1-210ENST00000548263 CLDN17P56750 224 aa8.47□□□□□ -1.05
CALCOCO1-210ENST00000548263 UBE2KP61086 200 aa8.47□□□□□ -1.05
CALCOCO1-210ENST00000548263 KIAA0141Q14154 515 aaPredicted RBP8.47□□□□□ -1.05
CALCOCO1-210ENST00000548263 NR0B2Q15466 257 aa8.47□□□□□ -1.05
CALCOCO1-210ENST00000548263 ARRDC1Q8N5I2 433 aa8.47□□□□□ -1.05
CALCOCO1-210ENST00000548263 EMG1Q92979 244 aaKnown RBP8.47□□□□□ -1.05
CALCOCO1-210ENST00000548263 CTHRC1Q96CG8 243 aa8.47□□□□□ -1.05
CALCOCO1-210ENST00000548263 HIST1H2AAQ96QV6 131 aa8.47□□□□□ -1.05
CALCOCO1-210ENST00000548263 OR6C1Q96RD1 312 aa8.47□□□□□ -1.05
CALCOCO1-210ENST00000548263 ANKRD10Q9NXR5 420 aa8.47□□□□□ -1.05
CALCOCO1-210ENST00000548263 IGKV1D-42A0A075B6H8 117 aa8.46□□□□□ -1.05
CALCOCO1-210ENST00000548263 FAM221AA4D161 298 aa8.46□□□□□ -1.05
CALCOCO1-210ENST00000548263 FRG2CA6NGY1 282 aa8.46□□□□□ -1.05
CALCOCO1-210ENST00000548263 DNASE2O00115 360 aaPredicted RBP8.46□□□□□ -1.05
CALCOCO1-210ENST00000548263 SOCS1O15524 211 aa8.46□□□□□ -1.05
CALCOCO1-210ENST00000548263 LMX1BO60663 402 aa8.46□□□□□ -1.05
CALCOCO1-210ENST00000548263 ASAH2BP0C7U1 165 aa8.46□□□□□ -1.05
CALCOCO1-210ENST00000548263 ZNF728P0DKX0 622 aa8.46□□□□□ -1.05
CALCOCO1-210ENST00000548263 CD37P11049 281 aa8.46□□□□□ -1.05
CALCOCO1-210ENST00000548263 PTAFRP25105 342 aa8.46□□□□□ -1.05
CALCOCO1-210ENST00000548263 NPBWR1P48145 328 aa8.46□□□□□ -1.05
CALCOCO1-210ENST00000548263 SMAD4Q13485 552 aaKnown RBP8.46□□□□□ -1.05
CALCOCO1-210ENST00000548263 ZNF345Q14585 488 aa8.46□□□□□ -1.05
CALCOCO1-210ENST00000548263 SP6Q3SY56 376 aa8.46□□□□□ -1.05
CALCOCO1-210ENST00000548263 PRAMEF20Q5VT98 475 aa8.46□□□□□ -1.05
CALCOCO1-210ENST00000548263 CLEC9AQ6UXN8 241 aa8.46□□□□□ -1.05
CALCOCO1-210ENST00000548263 MOB3CQ70IA8 216 aa8.46□□□□□ -1.05
CALCOCO1-210ENST00000548263 CATSPERDQ86XM0 798 aa8.46□□□□□ -1.05
CALCOCO1-210ENST00000548263 ZNF561Q8N587 486 aa8.46□□□□□ -1.05
CALCOCO1-210ENST00000548263 SECTM1Q8WVN6 248 aa8.46□□□□□ -1.05
CALCOCO1-210ENST00000548263 SLC25A28Q96A46 364 aa8.46□□□□□ -1.05
CALCOCO1-210ENST00000548263 SPTAN1Q13813 2472 aaKnown RBP8.46□□□□□ -1.05
CALCOCO1-210ENST00000548263 IGHV1OR15-9A0A0B4J2B8 117 aa8.46□□□□□ -1.06
CALCOCO1-210ENST00000548263 METTL12A8MUP2 240 aa8.46□□□□□ -1.06
CALCOCO1-210ENST00000548263 TP53I11O14683 189 aa8.46□□□□□ -1.06
CALCOCO1-210ENST00000548263 S100A8P05109 93 aa8.46□□□□□ -1.06
CALCOCO1-210ENST00000548263 SLC25A4P12235 298 aa8.46□□□□□ -1.06
CALCOCO1-210ENST00000548263 LAP3P28838 519 aa8.46□□□□□ -1.06
CALCOCO1-210ENST00000548263 INSM1Q01101 510 aaPredicted RBP8.46□□□□□ -1.06
CALCOCO1-210ENST00000548263 FABP9Q0Z7S8 132 aa8.46□□□□□ -1.06
CALCOCO1-210ENST00000548263 PCK2Q16822 640 aa8.46□□□□□ -1.06
CALCOCO1-210ENST00000548263 PRSS54Q6PEW0 395 aa8.46□□□□□ -1.06
CALCOCO1-210ENST00000548263 CLEC18BQ6UXF7 455 aa8.46□□□□□ -1.06
CALCOCO1-210ENST00000548263 SLC30A7Q8NEW0 376 aa8.46□□□□□ -1.06
CALCOCO1-210ENST00000548263 OR5L1Q8NGL2 311 aa8.46□□□□□ -1.06
CALCOCO1-210ENST00000548263 SCGB1C1Q8TD33 95 aa8.46□□□□□ -1.06
CALCOCO1-210ENST00000548263 ROBO4Q8WZ75 1007 aa8.46□□□□□ -1.06
CALCOCO1-210ENST00000548263 PADI1Q9ULC6 663 aa8.46□□□□□ -1.06
CALCOCO1-210ENST00000548263 SNRNP200O75643 2136 aaKnown RBP8.46□□□□□ -1.06
CALCOCO1-210ENST00000548263 PLXNA4Q9HCM2 1894 aa8.46□□□□□ -1.06
CALCOCO1-210ENST00000548263 C17orf51A8MQB3 221 aa8.46□□□□□ -1.06
CALCOCO1-210ENST00000548263 TRAPPC6AO75865 159 aa8.46□□□□□ -1.06
CALCOCO1-210ENST00000548263 SFT2D2O95562 160 aa8.46□□□□□ -1.06
CALCOCO1-210ENST00000548263 PDGFBP01127 241 aaPredicted RBP8.46□□□□□ -1.06
CALCOCO1-210ENST00000548263 IFNA5P01569 189 aa8.46□□□□□ -1.06
CALCOCO1-210ENST00000548263 FABP1P07148 127 aa8.46□□□□□ -1.06
CALCOCO1-210ENST00000548263 HLA-DOBP13765 273 aa8.46□□□□□ -1.06
CALCOCO1-210ENST00000548263 ABCD3P28288 659 aa8.46□□□□□ -1.06
CALCOCO1-210ENST00000548263 ZNF121P58317 390 aaPredicted RBP8.46□□□□□ -1.06
CALCOCO1-210ENST00000548263 NKX6-1P78426 367 aaPredicted RBP8.46□□□□□ -1.06
CALCOCO1-210ENST00000548263 TAF9Q16594 264 aa8.46□□□□□ -1.06
CALCOCO1-210ENST00000548263 OPN5Q6U736 354 aa8.46□□□□□ -1.06
CALCOCO1-210ENST00000548263 BATF2Q8N1L9 274 aa8.46□□□□□ -1.06
CALCOCO1-210ENST00000548263 RXFP4Q8TDU9 374 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms