RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 ARSGQ96EG1 525 aa11.56□□□□□ -0.56
PTCH1-212ENST00000546744 SLCO1B1Q9Y6L6 691 aa11.56□□□□□ -0.56
PTCH1-212ENST00000546744 KIAA0100Q14667 2235 aaKnown RBP11.55□□□□□ -0.56
PTCH1-212ENST00000546744 ZFPL1O95159 310 aa11.55□□□□□ -0.56
PTCH1-212ENST00000546744 HPXP02790 462 aa11.55□□□□□ -0.56
PTCH1-212ENST00000546744 OR5AC1P0C628 307 aa11.55□□□□□ -0.56
PTCH1-212ENST00000546744 PPICP45877 212 aa11.55□□□□□ -0.56
PTCH1-212ENST00000546744 MAT1AQ00266 395 aaKnown RBP11.55□□□□□ -0.56
PTCH1-212ENST00000546744 ZNF362Q5T0B9 420 aaPredicted RBP11.55□□□□□ -0.56
PTCH1-212ENST00000546744 OR8G2PQ6IF36 304 aa11.55□□□□□ -0.56
PTCH1-212ENST00000546744 NHLRC1Q6VVB1 395 aa11.55□□□□□ -0.56
PTCH1-212ENST00000546744 PRR18Q8N4B5 295 aa11.55□□□□□ -0.56
PTCH1-212ENST00000546744 THAP3Q8WTV1 239 aaPredicted RBP11.55□□□□□ -0.56
PTCH1-212ENST00000546744 ORAI1Q96D31 301 aa11.55□□□□□ -0.56
PTCH1-212ENST00000546744 MACROD1Q9BQ69 325 aa11.55□□□□□ -0.56
PTCH1-212ENST00000546744 GPR160Q9UJ42 338 aa11.55□□□□□ -0.56
PTCH1-212ENST00000546744 ZNF346Q9UL40 294 aaKnown RBP11.55□□□□□ -0.56
PTCH1-212ENST00000546744 PIGLQ9Y2B2 252 aa11.55□□□□□ -0.56
PTCH1-212ENST00000546744 CNTRLQ7Z7A1 2325 aa11.55□□□□□ -0.56
PTCH1-212ENST00000546744 RRP8O43159 456 aaKnown RBP11.55□□□□□ -0.56
PTCH1-212ENST00000546744 HIST1H1DP16402 221 aaKnown RBP11.55□□□□□ -0.56
PTCH1-212ENST00000546744 TCN2P20062 427 aa11.55□□□□□ -0.56
PTCH1-212ENST00000546744 CD96P40200 585 aa11.55□□□□□ -0.56
PTCH1-212ENST00000546744 AKR1C3P42330 323 aa11.55□□□□□ -0.56
PTCH1-212ENST00000546744 RAB32Q13637 225 aa11.55□□□□□ -0.56
PTCH1-212ENST00000546744 DEFB110Q30KQ9 67 aa11.55□□□□□ -0.56
PTCH1-212ENST00000546744 CCSMST1Q4G0I0 132 aa11.55□□□□□ -0.56
PTCH1-212ENST00000546744 OR2B11Q5JQS5 317 aa11.55□□□□□ -0.56
PTCH1-212ENST00000546744 PRR22Q8IZ63 422 aa11.55□□□□□ -0.56
PTCH1-212ENST00000546744 OR2C3Q8N628 320 aa11.55□□□□□ -0.56
PTCH1-212ENST00000546744 SLC35G3Q8N808 338 aa11.55□□□□□ -0.56
PTCH1-212ENST00000546744 TMEM37Q8WXS4 190 aa11.55□□□□□ -0.56
PTCH1-212ENST00000546744 PTX4Q96A99 478 aa11.55□□□□□ -0.56
PTCH1-212ENST00000546744 TMEM9BQ9NQ34 198 aa11.55□□□□□ -0.56
PTCH1-212ENST00000546744 METTL1Q9UBP6 276 aaKnown RBP11.55□□□□□ -0.56
PTCH1-212ENST00000546744 TNFRSF10CO14798 259 aa11.55□□□□□ -0.56
PTCH1-212ENST00000546744 SPINT2O43291 252 aa11.55□□□□□ -0.56
PTCH1-212ENST00000546744 FCMRO60667 390 aa11.55□□□□□ -0.56
PTCH1-212ENST00000546744 B3GALT4O96024 378 aa11.55□□□□□ -0.56
PTCH1-212ENST00000546744 SUMO3P55854 103 aaPredicted RBP11.55□□□□□ -0.56
PTCH1-212ENST00000546744 ELAVL1Q15717 326 aaKnown RBP11.55□□□□□ -0.56
PTCH1-212ENST00000546744 C19orf47Q8N9M1 422 aaKnown RBP11.55□□□□□ -0.56
PTCH1-212ENST00000546744 CMTM2Q8TAZ6 248 aa11.55□□□□□ -0.56
PTCH1-212ENST00000546744 FKBP11Q9NYL4 201 aa11.55□□□□□ -0.56
PTCH1-212ENST00000546744 RCL1Q9Y2P8 373 aaKnown RBP11.55□□□□□ -0.56
PTCH1-212ENST00000546744 A0A087WUJ7 227 aa11.54□□□□□ -0.56
PTCH1-212ENST00000546744 CHEK1O14757 476 aa11.54□□□□□ -0.56
PTCH1-212ENST00000546744 PEX11BO96011 259 aa11.54□□□□□ -0.56
PTCH1-212ENST00000546744 MPGP29372 298 aa11.54□□□□□ -0.56
PTCH1-212ENST00000546744 NHLRC3Q5JS37 347 aa11.54□□□□□ -0.56
PTCH1-212ENST00000546744 LANCL3Q6ZV70 420 aa11.54□□□□□ -0.56
PTCH1-212ENST00000546744 NUDT22Q9BRQ3 303 aa11.54□□□□□ -0.56
PTCH1-212ENST00000546744 MANBALQ9NQG1 85 aa11.54□□□□□ -0.56
PTCH1-212ENST00000546744 FBXO34Q9NWN3 711 aa11.54□□□□□ -0.56
PTCH1-212ENST00000546744 MAP1LC3B2A6NCE7 125 aa11.54□□□□□ -0.56
PTCH1-212ENST00000546744 FOXK1P85037 733 aa11.54□□□□□ -0.56
PTCH1-212ENST00000546744 HSF1Q00613 529 aa11.54□□□□□ -0.56
PTCH1-212ENST00000546744 BSXQ3C1V8 233 aa11.54□□□□□ -0.56
PTCH1-212ENST00000546744 DGAT2L6Q6ZPD8 337 aa11.54□□□□□ -0.56
PTCH1-212ENST00000546744 ZNF761Q86XN6 746 aaPredicted RBP11.54□□□□□ -0.56
PTCH1-212ENST00000546744 ZNF321PQ8N8H1 164 aa11.54□□□□□ -0.56
PTCH1-212ENST00000546744 MAP1LC3BQ9GZQ8 125 aa11.54□□□□□ -0.56
PTCH1-212ENST00000546744 PSENENQ9NZ42 101 aa11.54□□□□□ -0.56
PTCH1-212ENST00000546744 PARP14Q460N5 1801 aa11.54□□□□□ -0.56
PTCH1-212ENST00000546744 ETHE1O95571 254 aa11.54□□□□□ -0.56
PTCH1-212ENST00000546744 CD200R1LQ6Q8B3 271 aa11.54□□□□□ -0.56
PTCH1-212ENST00000546744 AAED1Q7RTV5 226 aa11.54□□□□□ -0.56
PTCH1-212ENST00000546744 REEP6Q96HR9 211 aa11.54□□□□□ -0.56
PTCH1-212ENST00000546744 ESRP2Q9H6T0 727 aaKnown RBP11.54□□□□□ -0.56
PTCH1-212ENST00000546744 B9D1Q9UPM9 204 aa11.54□□□□□ -0.56
PTCH1-212ENST00000546744 POLDIP2Q9Y2S7 368 aa11.54□□□□□ -0.56
PTCH1-212ENST00000546744 A0A0B4J2E0 115 aa11.53□□□□□ -0.56
PTCH1-212ENST00000546744 A0A1B0GX12 115 aa11.53□□□□□ -0.56
PTCH1-212ENST00000546744 CTSDP07339 412 aaPredicted RBP11.53□□□□□ -0.56
PTCH1-212ENST00000546744 TNFSF4P23510 183 aa11.53□□□□□ -0.56
PTCH1-212ENST00000546744 CLDN15P56746 228 aa11.53□□□□□ -0.56
PTCH1-212ENST00000546744 UBE2G2P60604 165 aa11.53□□□□□ -0.56
PTCH1-212ENST00000546744 KHDC3LQ587J8 217 aa11.53□□□□□ -0.56
PTCH1-212ENST00000546744 FAM26DQ5JW98 314 aa11.53□□□□□ -0.56
PTCH1-212ENST00000546744 NCMAPQ5T1S8 102 aa11.53□□□□□ -0.56
PTCH1-212ENST00000546744 NKAIN2Q5VXU1 208 aa11.53□□□□□ -0.56
PTCH1-212ENST00000546744 MAML2Q8IZL2 1156 aaPredicted RBP11.53□□□□□ -0.56
PTCH1-212ENST00000546744 NECAP1Q8NC96 275 aa11.53□□□□□ -0.56
PTCH1-212ENST00000546744 PHOSPHO2Q8TCD6 241 aa11.53□□□□□ -0.56
PTCH1-212ENST00000546744 ZNRF4Q8WWF5 429 aa11.53□□□□□ -0.56
PTCH1-212ENST00000546744 GMPPAQ96IJ6 420 aaPredicted RBP11.53□□□□□ -0.56
PTCH1-212ENST00000546744 FOXN4Q96NZ1 517 aa11.53□□□□□ -0.56
PTCH1-212ENST00000546744 STRADBQ9C0K7 418 aa11.53□□□□□ -0.56
PTCH1-212ENST00000546744 ZNF552Q9H707 407 aaPredicted RBP11.53□□□□□ -0.56
PTCH1-212ENST00000546744 PLSCR5A0PG75 271 aa11.53□□□□□ -0.56
PTCH1-212ENST00000546744 SDCBPO00560 298 aaPredicted RBP11.53□□□□□ -0.56
PTCH1-212ENST00000546744 NRASP01111 189 aa11.53□□□□□ -0.56
PTCH1-212ENST00000546744 HRASP01112 189 aa11.53□□□□□ -0.56
PTCH1-212ENST00000546744 KRASP01116 189 aa11.53□□□□□ -0.56
PTCH1-212ENST00000546744 HOXD4P09016 255 aaPredicted RBP11.53□□□□□ -0.56
PTCH1-212ENST00000546744 FBP1P09467 338 aa11.53□□□□□ -0.56
PTCH1-212ENST00000546744 STAG3L2P0CL84 134 aa11.53□□□□□ -0.56
PTCH1-212ENST00000546744 USF1P22415 310 aaPredicted RBP11.53□□□□□ -0.56
PTCH1-212ENST00000546744 CLDN17P56750 224 aa11.53□□□□□ -0.56
PTCH1-212ENST00000546744 FAM3AP98173 230 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms