RNA–Protein interactions for RNA: ENST00000545608.5

USP28-215, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 733 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-215ENST00000545608 SAMD4BQ5PRF9 694 aaKnown RBP7□□□□□ -1.29
USP28-215ENST00000545608 CD276Q5ZPR3 534 aa7□□□□□ -1.29
USP28-215ENST00000545608 ZNF770Q6IQ21 691 aaPredicted RBP7□□□□□ -1.29
USP28-215ENST00000545608 THNSL2Q86YJ6 484 aa7□□□□□ -1.29
USP28-215ENST00000545608 C11orf53Q8IXP5 236 aa7□□□□□ -1.29
USP28-215ENST00000545608 FGFRL1Q8N441 504 aa7□□□□□ -1.29
USP28-215ENST00000545608 LNX2Q8N448 690 aa7□□□□□ -1.29
USP28-215ENST00000545608 GCSAMQ8N6F7 178 aa7□□□□□ -1.29
USP28-215ENST00000545608 SPERTQ8NA61 448 aa7□□□□□ -1.29
USP28-215ENST00000545608 OR52L1Q8NGH7 329 aa7□□□□□ -1.29
USP28-215ENST00000545608 OR4C15Q8NGM1 316 aa7□□□□□ -1.29
USP28-215ENST00000545608 OR4Q3Q8NH05 313 aa7□□□□□ -1.29
USP28-215ENST00000545608 SLAMF6Q96DU3 332 aa7□□□□□ -1.29
USP28-215ENST00000545608 WDFY2Q96P53 400 aa7□□□□□ -1.29
USP28-215ENST00000545608 KCNJ15Q99712 375 aa7□□□□□ -1.29
USP28-215ENST00000545608 COPS4Q9BT78 406 aa7□□□□□ -1.29
USP28-215ENST00000545608 TSSK6Q9BXA6 273 aa7□□□□□ -1.29
USP28-215ENST00000545608 FAM192AQ9GZU8 254 aa7□□□□□ -1.29
USP28-215ENST00000545608 SIRPDQ9H106 197 aa7□□□□□ -1.29
USP28-215ENST00000545608 VCX3BQ9H321 246 aa7□□□□□ -1.29
USP28-215ENST00000545608 VCX3AQ9NNX9 186 aa7□□□□□ -1.29
USP28-215ENST00000545608 PAPOLBQ9NRJ5 636 aaKnown RBP7□□□□□ -1.29
USP28-215ENST00000545608 ARL8BQ9NVJ2 186 aa7□□□□□ -1.29
USP28-215ENST00000545608 C1RLQ9NZP8 487 aa7□□□□□ -1.29
USP28-215ENST00000545608 MRPL15Q9P015 296 aaKnown RBP7□□□□□ -1.29
USP28-215ENST00000545608 NOP16Q9Y3C1 178 aaKnown RBP7□□□□□ -1.29
USP28-215ENST00000545608 COMMD3-BMI1R4GMX3 469 aa7□□□□□ -1.29
USP28-215ENST00000545608 A0A1B0GUS0 222 aa6.99□□□□□ -1.29
USP28-215ENST00000545608 A0A1B0GW55 424 aa6.99□□□□□ -1.29
USP28-215ENST00000545608 hCG_1807616A0A1W2PRN6 198 aa6.99□□□□□ -1.29
USP28-215ENST00000545608 A6NLC8 198 aa6.99□□□□□ -1.29
USP28-215ENST00000545608 DVL1O14640 695 aa6.99□□□□□ -1.29
USP28-215ENST00000545608 TBX1O43435 398 aa6.99□□□□□ -1.29
USP28-215ENST00000545608 NDUFA2O43678 99 aa6.99□□□□□ -1.29
USP28-215ENST00000545608 KRT36O76013 467 aa6.99□□□□□ -1.29
USP28-215ENST00000545608 KNG1P01042 644 aa6.99□□□□□ -1.29
USP28-215ENST00000545608 CRYBA1P05813 215 aa6.99□□□□□ -1.29
USP28-215ENST00000545608 DUX4L2P0CJ85 424 aa6.99□□□□□ -1.29
USP28-215ENST00000545608 DUX4L3P0CJ86 424 aa6.99□□□□□ -1.29
USP28-215ENST00000545608 DUX4L4P0CJ87 422 aa6.99□□□□□ -1.29
USP28-215ENST00000545608 DUX4L5P0CJ88 424 aa6.99□□□□□ -1.29
USP28-215ENST00000545608 DUX4L6P0CJ89 424 aa6.99□□□□□ -1.29
USP28-215ENST00000545608 DUX4L7P0CJ90 424 aa6.99□□□□□ -1.29
USP28-215ENST00000545608 FMO3P31513 532 aa6.99□□□□□ -1.29
USP28-215ENST00000545608 ENTPD1P49961 510 aa6.99□□□□□ -1.29
USP28-215ENST00000545608 RAG2P55895 527 aa6.99□□□□□ -1.29
USP28-215ENST00000545608 KRTAP10-3P60369 221 aa6.99□□□□□ -1.29
USP28-215ENST00000545608 FAM3AP98173 230 aa6.99□□□□□ -1.29
USP28-215ENST00000545608 TAF13Q15543 124 aa6.99□□□□□ -1.29
USP28-215ENST00000545608 TEX30Q5JUR7 227 aa6.99□□□□□ -1.29
USP28-215ENST00000545608 RPL13AP3Q6NVV1 102 aa6.99□□□□□ -1.29
USP28-215ENST00000545608 DUX4L9Q6RFH8 374 aaPredicted RBP6.99□□□□□ -1.29
USP28-215ENST00000545608 CYP2R1Q6VVX0 501 aa6.99□□□□□ -1.29
USP28-215ENST00000545608 RASSF6Q6ZTQ3 369 aa6.99□□□□□ -1.29
USP28-215ENST00000545608 BTN2A1Q7KYR7 527 aa6.99□□□□□ -1.29
USP28-215ENST00000545608 WDR86Q86TI4 376 aa6.99□□□□□ -1.29
USP28-215ENST00000545608 FAM90A1Q86YD7 464 aa6.99□□□□□ -1.29
USP28-215ENST00000545608 DEFB107AQ8IZN7 70 aa6.99□□□□□ -1.29
USP28-215ENST00000545608 TMEM86BQ8N661 226 aa6.99□□□□□ -1.29
USP28-215ENST00000545608 PNLDC1Q8NA58 520 aaKnown RBP6.99□□□□□ -1.29
USP28-215ENST00000545608 OR4F5Q8NH21 305 aa6.99□□□□□ -1.29
USP28-215ENST00000545608 LHX4Q969G2 390 aa6.99□□□□□ -1.29
USP28-215ENST00000545608 SPSB4Q96A44 273 aa6.99□□□□□ -1.29
USP28-215ENST00000545608 SGK3Q96BR1 496 aa6.99□□□□□ -1.29
USP28-215ENST00000545608 SEH1LQ96EE3 360 aa6.99□□□□□ -1.29
USP28-215ENST00000545608 FAM71F1Q96KD3 344 aaPredicted RBP6.99□□□□□ -1.29
USP28-215ENST00000545608 CLUHP3Q96NS8 147 aa6.99□□□□□ -1.29
USP28-215ENST00000545608 NMNAT2Q9BZQ4 307 aa6.99□□□□□ -1.29
USP28-215ENST00000545608 TRIM15Q9C019 465 aa6.99□□□□□ -1.29
USP28-215ENST00000545608 PPP1R3EQ9H7J1 279 aa6.99□□□□□ -1.29
USP28-215ENST00000545608 BEX1Q9HBH7 125 aa6.99□□□□□ -1.29
USP28-215ENST00000545608 ACOXLQ9NUZ1 547 aa6.99□□□□□ -1.29
USP28-215ENST00000545608 GFOD1Q9NXC2 390 aa6.99□□□□□ -1.29
USP28-215ENST00000545608 VNN3Q9NY84 501 aa6.99□□□□□ -1.29
USP28-215ENST00000545608 PDP1Q9P0J1 537 aaPredicted RBP6.99□□□□□ -1.29
USP28-215ENST00000545608 DUX4Q9UBX2 424 aa6.99□□□□□ -1.29
USP28-215ENST00000545608 TAGLN3Q9UI15 199 aa6.99□□□□□ -1.29
USP28-215ENST00000545608 SCOCQ9UIL1 159 aa6.99□□□□□ -1.29
USP28-215ENST00000545608 DOCK11Q5JSL3 2073 aa6.99□□□□□ -1.29
USP28-215ENST00000545608 IGHV1-69DA0A0B4J2H0 117 aa6.98□□□□□ -1.29
USP28-215ENST00000545608 A0A0U1RQK1 487 aa6.98□□□□□ -1.29
USP28-215ENST00000545608 DHRS12A0PJE2 317 aa6.98□□□□□ -1.29
USP28-215ENST00000545608 CLPSL1A2RUU4 121 aa6.98□□□□□ -1.29
USP28-215ENST00000545608 ANKRD30BLA7E2S9 258 aa6.98□□□□□ -1.29
USP28-215ENST00000545608 ZNF878C9JN71 531 aa6.98□□□□□ -1.29
USP28-215ENST00000545608 XRCC2O43543 280 aa6.98□□□□□ -1.29
USP28-215ENST00000545608 DCTN3O75935 186 aa6.98□□□□□ -1.29
USP28-215ENST00000545608 CCNB2O95067 398 aa6.98□□□□□ -1.29
USP28-215ENST00000545608 NDUFA7O95182 113 aa6.98□□□□□ -1.29
USP28-215ENST00000545608 SOX14O95416 240 aa6.98□□□□□ -1.29
USP28-215ENST00000545608 IGHV1-69P01742 117 aa6.98□□□□□ -1.29
USP28-215ENST00000545608 CPEP16870 476 aa6.98□□□□□ -1.29
USP28-215ENST00000545608 SPI1P17947 270 aa6.98□□□□□ -1.29
USP28-215ENST00000545608 AMY2BP19961 511 aa6.98□□□□□ -1.29
USP28-215ENST00000545608 ATP6V1B2P21281 511 aa6.98□□□□□ -1.29
USP28-215ENST00000545608 DDOSTP39656 456 aa6.98□□□□□ -1.29
USP28-215ENST00000545608 MAGEA2P43356 314 aa6.98□□□□□ -1.29
USP28-215ENST00000545608 SLC25A1P53007 311 aa6.98□□□□□ -1.29
USP28-215ENST00000545608 CSNK2BP67870 215 aa6.98□□□□□ -1.29
USP28-215ENST00000545608 BNIP1Q12981 228 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms