RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 SP140LQ9H930 580 aa17.51■□□□□ 0.39
SCARB1-210ENST00000545493 RHBDD3Q9Y3P4 386 aa17.51■□□□□ 0.39
SCARB1-210ENST00000545493 PCDHGB1Q9Y5G3 927 aa17.51■□□□□ 0.39
SCARB1-210ENST00000545493 TCRBV3S1A0A5B6 114 aa17.5■□□□□ 0.39
SCARB1-210ENST00000545493 ZNF879B4DU55 563 aa17.5■□□□□ 0.39
SCARB1-210ENST00000545493 ACKR3P25106 362 aa17.5■□□□□ 0.39
SCARB1-210ENST00000545493 PSMA6P60900 246 aaKnown RBP17.5■□□□□ 0.39
SCARB1-210ENST00000545493 CBX1P83916 185 aa17.5■□□□□ 0.39
SCARB1-210ENST00000545493 POU4F2Q12837 409 aa17.5■□□□□ 0.39
SCARB1-210ENST00000545493 FOXL1Q12952 345 aa17.5■□□□□ 0.39
SCARB1-210ENST00000545493 DEFB112Q30KQ8 113 aa17.5■□□□□ 0.39
SCARB1-210ENST00000545493 WDR82Q6UXN9 313 aa17.5■□□□□ 0.39
SCARB1-210ENST00000545493 CPOQ8IVL8 374 aa17.5■□□□□ 0.39
SCARB1-210ENST00000545493 FGFRL1Q8N441 504 aa17.5■□□□□ 0.39
SCARB1-210ENST00000545493 SLC7A6OSQ96CW6 309 aaPredicted RBP17.5■□□□□ 0.39
SCARB1-210ENST00000545493 ITPKCQ96DU7 683 aa17.5■□□□□ 0.39
SCARB1-210ENST00000545493 PCGF1Q9BSM1 259 aa17.5■□□□□ 0.39
SCARB1-210ENST00000545493 PAPOLGQ9BWT3 736 aaKnown RBP17.5■□□□□ 0.39
SCARB1-210ENST00000545493 FGF23Q9GZV9 251 aaPredicted RBP17.5■□□□□ 0.39
SCARB1-210ENST00000545493 TLNRD1Q9H1K6 362 aa17.5■□□□□ 0.39
SCARB1-210ENST00000545493 RASSF4Q9H2L5 321 aa17.5■□□□□ 0.39
SCARB1-210ENST00000545493 SLC25A19Q9HC21 320 aa17.5■□□□□ 0.39
SCARB1-210ENST00000545493 NDUFA2O43678 99 aa17.49■□□□□ 0.39
SCARB1-210ENST00000545493 HOXB6P17509 224 aaKnown RBP17.49■□□□□ 0.39
SCARB1-210ENST00000545493 PRKACGP22612 351 aa17.49■□□□□ 0.39
SCARB1-210ENST00000545493 CFL1P23528 166 aaKnown RBP17.49■□□□□ 0.39
SCARB1-210ENST00000545493 GPR157Q5UAW9 335 aa17.49■□□□□ 0.39
SCARB1-210ENST00000545493 TMEM236Q5W0B7 351 aa17.49■□□□□ 0.39
SCARB1-210ENST00000545493 CD276Q5ZPR3 534 aa17.49■□□□□ 0.39
SCARB1-210ENST00000545493 ZNF454Q8N9F8 522 aa17.49■□□□□ 0.39
SCARB1-210ENST00000545493 CSNK2A3Q8NEV1 391 aa17.49■□□□□ 0.39
SCARB1-210ENST00000545493 SLC25A28Q96A46 364 aa17.49■□□□□ 0.39
SCARB1-210ENST00000545493 LYZL4Q96KX0 146 aa17.49■□□□□ 0.39
SCARB1-210ENST00000545493 RGCCQ9H4X1 137 aa17.49■□□□□ 0.39
SCARB1-210ENST00000545493 RNPEPL1Q9HAU8 725 aa17.49■□□□□ 0.39
SCARB1-210ENST00000545493 KAAG1Q9UBP8 84 aa17.49■□□□□ 0.39
SCARB1-210ENST00000545493 POMPQ9Y244 141 aa17.49■□□□□ 0.39
SCARB1-210ENST00000545493 DYNC1I1O14576 645 aa17.48■□□□□ 0.39
SCARB1-210ENST00000545493 DVL1O14640 695 aa17.48■□□□□ 0.39
SCARB1-210ENST00000545493 GYG2O15488 501 aa17.48■□□□□ 0.39
SCARB1-210ENST00000545493 HMGN1P05114 100 aa17.48■□□□□ 0.39
SCARB1-210ENST00000545493 ANXA8P13928 327 aa17.48■□□□□ 0.39
SCARB1-210ENST00000545493 SLC35D3Q5M8T2 416 aa17.48■□□□□ 0.39
SCARB1-210ENST00000545493 PAPD5Q8NDF8 572 aaKnown RBP17.48■□□□□ 0.39
SCARB1-210ENST00000545493 OR8B12Q8NGG6 310 aa17.48■□□□□ 0.39
SCARB1-210ENST00000545493 THEM6Q8WUY1 208 aa17.48■□□□□ 0.39
SCARB1-210ENST00000545493 HPSE2Q8WWQ2 592 aa17.48■□□□□ 0.39
SCARB1-210ENST00000545493 SEH1LQ96EE3 360 aa17.48■□□□□ 0.39
SCARB1-210ENST00000545493 ZNF747Q9BV97 191 aa17.48■□□□□ 0.39
SCARB1-210ENST00000545493 SIRPDQ9H106 197 aa17.48■□□□□ 0.39
SCARB1-210ENST00000545493 PRDM13Q9H4Q3 707 aa17.48■□□□□ 0.39
SCARB1-210ENST00000545493 ZNF556Q9HAH1 456 aa17.48■□□□□ 0.39
SCARB1-210ENST00000545493 DNAJB9Q9UBS3 223 aa17.48■□□□□ 0.39
SCARB1-210ENST00000545493 LRP12Q9Y561 859 aa17.48■□□□□ 0.39
SCARB1-210ENST00000545493 SRRM5B3KS81 715 aa17.47■□□□□ 0.39
SCARB1-210ENST00000545493 P2RY10O00398 339 aa17.47■□□□□ 0.39
SCARB1-210ENST00000545493 TMPRSS2O15393 492 aa17.47■□□□□ 0.39
SCARB1-210ENST00000545493 HOXA3O43365 443 aaPredicted RBP17.47■□□□□ 0.39
SCARB1-210ENST00000545493 TIPRLO75663 272 aa17.47■□□□□ 0.39
SCARB1-210ENST00000545493 GNALP38405 381 aa17.47■□□□□ 0.39
SCARB1-210ENST00000545493 RPS7P62081 194 aaKnown RBP17.47■□□□□ 0.39
SCARB1-210ENST00000545493 WDR38Q5JTN6 314 aa17.47■□□□□ 0.39
SCARB1-210ENST00000545493 BTN2A1Q7KYR7 527 aa17.47■□□□□ 0.39
SCARB1-210ENST00000545493 FAM216BQ8N7L0 139 aa17.47■□□□□ 0.39
SCARB1-210ENST00000545493 FAM53CQ9NYF3 392 aa17.47■□□□□ 0.39
SCARB1-210ENST00000545493 PKD1L1Q8TDX9 2849 aa17.46■□□□□ 0.39
SCARB1-210ENST00000545493 CENPVL3A0A0U1RRI6 287 aa17.46■□□□□ 0.39
SCARB1-210ENST00000545493 CCDC182A6NF36 153 aa17.46■□□□□ 0.39
SCARB1-210ENST00000545493 PRR32B1ATL7 298 aa17.46■□□□□ 0.39
SCARB1-210ENST00000545493 CDIPTO14735 213 aa17.46■□□□□ 0.39
SCARB1-210ENST00000545493 TOX4O94842 621 aa17.46■□□□□ 0.39
SCARB1-210ENST00000545493 MUC1P15941 1255 aaPredicted RBP17.46■□□□□ 0.39
SCARB1-210ENST00000545493 PRDX4Q13162 271 aa17.46■□□□□ 0.39
SCARB1-210ENST00000545493 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.46■□□□□ 0.39
SCARB1-210ENST00000545493 GALNT4Q8N4A0 578 aa17.46■□□□□ 0.39
SCARB1-210ENST00000545493 PNLDC1Q8NA58 520 aaKnown RBP17.46■□□□□ 0.39
SCARB1-210ENST00000545493 SGMS2Q8NHU3 365 aa17.46■□□□□ 0.39
SCARB1-210ENST00000545493 BCAS4Q8TDM0 211 aa17.46■□□□□ 0.39
SCARB1-210ENST00000545493 ST8SIA4Q92187 359 aa17.46■□□□□ 0.39
SCARB1-210ENST00000545493 WDFY2Q96P53 400 aa17.46■□□□□ 0.39
SCARB1-210ENST00000545493 CCL13Q99616 98 aa17.46■□□□□ 0.39
SCARB1-210ENST00000545493 MICU1Q9BPX6 476 aa17.46■□□□□ 0.39
SCARB1-210ENST00000545493 YY1AP1Q9H869 796 aa17.46■□□□□ 0.39
SCARB1-210ENST00000545493 UNKLQ9H9P5 680 aaKnown RBP17.46■□□□□ 0.39
SCARB1-210ENST00000545493 MEGF8Q7Z7M0 2845 aa17.46■□□□□ 0.39
SCARB1-210ENST00000545493 MGAM2Q2M2H8 2515 aa17.46■□□□□ 0.38
SCARB1-210ENST00000545493 ANXA2P2A6NMY6 339 aa17.45■□□□□ 0.38
SCARB1-210ENST00000545493 ZNF850A8MQ14 1090 aa17.45■□□□□ 0.38
SCARB1-210ENST00000545493 SPRY1O43609 319 aaPredicted RBP17.45■□□□□ 0.38
SCARB1-210ENST00000545493 LIPFP07098 398 aa17.45■□□□□ 0.38
SCARB1-210ENST00000545493 MRPL3P09001 348 aaKnown RBP17.45■□□□□ 0.38
SCARB1-210ENST00000545493 ALOX5APP20292 161 aa17.45■□□□□ 0.38
SCARB1-210ENST00000545493 HCCSP53701 268 aa17.45■□□□□ 0.38
SCARB1-210ENST00000545493 IL5RAQ01344 420 aa17.45■□□□□ 0.38
SCARB1-210ENST00000545493 APOFQ13790 326 aa17.45■□□□□ 0.38
SCARB1-210ENST00000545493 MICBQ29980 383 aa17.45■□□□□ 0.38
SCARB1-210ENST00000545493 METTL11BQ5VVY1 283 aa17.45■□□□□ 0.38
SCARB1-210ENST00000545493 STUMQ69YW2 141 aa17.45■□□□□ 0.38
SCARB1-210ENST00000545493 FAHD1Q6P587 224 aa17.45■□□□□ 0.38
SCARB1-210ENST00000545493 FTMTQ8N4E7 242 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms