RNA–Protein interactions for RNA: ENST00000543552.5

RTN3-213, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-213ENST00000543552 LRRC29Q8WV35 223 aa10.88□□□□□ -0.67
RTN3-213ENST00000543552 ST8SIA4Q92187 359 aa10.88□□□□□ -0.67
RTN3-213ENST00000543552 DMRTB1Q96MA1 342 aa10.88□□□□□ -0.67
RTN3-213ENST00000543552 CCT8L2Q96SF2 557 aa10.88□□□□□ -0.67
RTN3-213ENST00000543552 RTL8AQ9BWD3 113 aa10.88□□□□□ -0.67
RTN3-213ENST00000543552 NIPAL2Q9H841 368 aa10.88□□□□□ -0.67
RTN3-213ENST00000543552 BEX1Q9HBH7 125 aa10.88□□□□□ -0.67
RTN3-213ENST00000543552 SMURF1Q9HCE7 757 aa10.88□□□□□ -0.67
RTN3-213ENST00000543552 ACOXLQ9NUZ1 547 aa10.88□□□□□ -0.67
RTN3-213ENST00000543552 VNN3Q9NY84 501 aa10.88□□□□□ -0.67
RTN3-213ENST00000543552 DNAJC27Q9NZQ0 273 aa10.88□□□□□ -0.67
RTN3-213ENST00000543552 MMP24Q9Y5R2 645 aa10.88□□□□□ -0.67
RTN3-213ENST00000543552 IGHV1-69DA0A0B4J2H0 117 aa10.87□□□□□ -0.67
RTN3-213ENST00000543552 C5orf63A6NC05 138 aa10.87□□□□□ -0.67
RTN3-213ENST00000543552 FAM183AA6NL82 134 aa10.87□□□□□ -0.67
RTN3-213ENST00000543552 TMEM210A6NLX4 147 aa10.87□□□□□ -0.67
RTN3-213ENST00000543552 DVL1O14640 695 aa10.87□□□□□ -0.67
RTN3-213ENST00000543552 PRODHO43272 600 aa10.87□□□□□ -0.67
RTN3-213ENST00000543552 E2F6O75461 281 aa10.87□□□□□ -0.67
RTN3-213ENST00000543552 FAM107AO95990 144 aa10.87□□□□□ -0.67
RTN3-213ENST00000543552 IGHV1-69P01742 117 aa10.87□□□□□ -0.67
RTN3-213ENST00000543552 HMGN1P05114 100 aa10.87□□□□□ -0.67
RTN3-213ENST00000543552 LYNP07948 512 aa10.87□□□□□ -0.67
RTN3-213ENST00000543552 MMP9P14780 707 aa10.87□□□□□ -0.67
RTN3-213ENST00000543552 Q6YL49 198 aa10.87□□□□□ -0.67
RTN3-213ENST00000543552 C17orf107Q6ZR85 190 aa10.87□□□□□ -0.67
RTN3-213ENST00000543552 BTN2A1Q7KYR7 527 aa10.87□□□□□ -0.67
RTN3-213ENST00000543552 GALNT4Q8N4A0 578 aa10.87□□□□□ -0.67
RTN3-213ENST00000543552 IQCF1Q8N6M8 205 aa10.87□□□□□ -0.67
RTN3-213ENST00000543552 SCCPDHQ8NBX0 429 aa10.87□□□□□ -0.67
RTN3-213ENST00000543552 OR1M1Q8NGA1 313 aa10.87□□□□□ -0.67
RTN3-213ENST00000543552 SGK3Q96BR1 496 aa10.87□□□□□ -0.67
RTN3-213ENST00000543552 TBX15Q96SF7 602 aa10.87□□□□□ -0.67
RTN3-213ENST00000543552 NIPSNAP1Q9BPW8 284 aa10.87□□□□□ -0.67
RTN3-213ENST00000543552 CHID1Q9BWS9 393 aa10.87□□□□□ -0.67
RTN3-213ENST00000543552 C1orf21Q9H246 121 aa10.87□□□□□ -0.67
RTN3-213ENST00000543552 OR51V1Q9H2C8 321 aa10.87□□□□□ -0.67
RTN3-213ENST00000543552 YY1AP1Q9H869 796 aa10.87□□□□□ -0.67
RTN3-213ENST00000543552 MED20Q9H944 212 aa10.87□□□□□ -0.67
RTN3-213ENST00000543552 RPUSD1Q9UJJ7 312 aaKnown RBP10.87□□□□□ -0.67
RTN3-213ENST00000543552 CAB39Q9Y376 341 aaPredicted RBP10.87□□□□□ -0.67
RTN3-213ENST00000543552 MPC1Q9Y5U8 109 aa10.87□□□□□ -0.67
RTN3-213ENST00000543552 KPTNQ9Y664 436 aa10.87□□□□□ -0.67
RTN3-213ENST00000543552 CENPVL3A0A0U1RRI6 287 aa10.86□□□□□ -0.67
RTN3-213ENST00000543552 A0A1B0GVI7 797 aa10.86□□□□□ -0.67
RTN3-213ENST00000543552 FAM181BA6NEQ2 426 aa10.86□□□□□ -0.67
RTN3-213ENST00000543552 NKX6-3A6NJ46 265 aa10.86□□□□□ -0.67
RTN3-213ENST00000543552 AQP12BA6NM10 295 aa10.86□□□□□ -0.67
RTN3-213ENST00000543552 NDUFB3O43676 98 aa10.86□□□□□ -0.67
RTN3-213ENST00000543552 KNG1P01042 644 aa10.86□□□□□ -0.67
RTN3-213ENST00000543552 MDKP21741 143 aaPredicted RBP10.86□□□□□ -0.67
RTN3-213ENST00000543552 ANOS1P23352 680 aa10.86□□□□□ -0.67
RTN3-213ENST00000543552 POU1F1P28069 291 aa10.86□□□□□ -0.67
RTN3-213ENST00000543552 RAG2P55895 527 aa10.86□□□□□ -0.67
RTN3-213ENST00000543552 HOXA4Q00056 320 aaPredicted RBP10.86□□□□□ -0.67
RTN3-213ENST00000543552 MS4A2Q01362 244 aa10.86□□□□□ -0.67
RTN3-213ENST00000543552 CDONQ4KMG0 1287 aa10.86□□□□□ -0.67
RTN3-213ENST00000543552 PLBD1Q6P4A8 553 aa10.86□□□□□ -0.67
RTN3-213ENST00000543552 FIP1L1Q6UN15 594 aaKnown RBP10.86□□□□□ -0.67
RTN3-213ENST00000543552 WDR82Q6UXN9 313 aa10.86□□□□□ -0.67
RTN3-213ENST00000543552 PRSS45Q7RTY3 260 aa10.86□□□□□ -0.67
RTN3-213ENST00000543552 AQP12AQ8IXF9 295 aa10.86□□□□□ -0.67
RTN3-213ENST00000543552 TIGD4Q8IY51 512 aa10.86□□□□□ -0.67
RTN3-213ENST00000543552 PAPD5Q8NDF8 572 aaKnown RBP10.86□□□□□ -0.67
RTN3-213ENST00000543552 OTOSQ8NHW6 89 aa10.86□□□□□ -0.67
RTN3-213ENST00000543552 LHX4Q969G2 390 aa10.86□□□□□ -0.67
RTN3-213ENST00000543552 ITFG2Q969R8 447 aa10.86□□□□□ -0.67
RTN3-213ENST00000543552 SIRPDQ9H106 197 aa10.86□□□□□ -0.67
RTN3-213ENST00000543552 DNTTIP1Q9H147 329 aa10.86□□□□□ -0.67
RTN3-213ENST00000543552 TLNRD1Q9H1K6 362 aa10.86□□□□□ -0.67
RTN3-213ENST00000543552 CNTD2Q9H8S5 307 aa10.86□□□□□ -0.67
RTN3-213ENST00000543552 BRD7Q9NPI1 651 aa10.86□□□□□ -0.67
RTN3-213ENST00000543552 DNAJB11Q9UBS4 358 aa10.86□□□□□ -0.67
RTN3-213ENST00000543552 SOX21Q9Y651 276 aaPredicted RBP10.86□□□□□ -0.67
RTN3-213ENST00000543552 IGHV3OR15-7A0A075B7D8 119 aa10.85□□□□□ -0.67
RTN3-213ENST00000543552 NDUFA7O95182 113 aa10.85□□□□□ -0.67
RTN3-213ENST00000543552 MELTFP08582 738 aa10.85□□□□□ -0.67
RTN3-213ENST00000543552 OSMP13725 252 aa10.85□□□□□ -0.67
RTN3-213ENST00000543552 PSMA6P60900 246 aaKnown RBP10.85□□□□□ -0.67
RTN3-213ENST00000543552 ARF6P62330 175 aa10.85□□□□□ -0.67
RTN3-213ENST00000543552 CSNK2BP67870 215 aa10.85□□□□□ -0.67
RTN3-213ENST00000543552 GINS1Q14691 196 aa10.85□□□□□ -0.67
RTN3-213ENST00000543552 KLHL12Q53G59 568 aa10.85□□□□□ -0.67
RTN3-213ENST00000543552 LRRC10Q5BKY1 277 aa10.85□□□□□ -0.67
RTN3-213ENST00000543552 WDR38Q5JTN6 314 aa10.85□□□□□ -0.67
RTN3-213ENST00000543552 SLC35D3Q5M8T2 416 aa10.85□□□□□ -0.67
RTN3-213ENST00000543552 RUSC1-AS1Q66K80 236 aa10.85□□□□□ -0.67
RTN3-213ENST00000543552 KCTD8Q6ZWB6 473 aa10.85□□□□□ -0.67
RTN3-213ENST00000543552 WDR86Q86TI4 376 aa10.85□□□□□ -0.67
RTN3-213ENST00000543552 ADGRG5Q8IZF4 528 aa10.85□□□□□ -0.67
RTN3-213ENST00000543552 KIR3DL3Q8N743 410 aa10.85□□□□□ -0.67
RTN3-213ENST00000543552 OR10Z1Q8NGY1 313 aa10.85□□□□□ -0.67
RTN3-213ENST00000543552 FAM81AQ8TBF8 368 aa10.85□□□□□ -0.67
RTN3-213ENST00000543552 THEM6Q8WUY1 208 aa10.85□□□□□ -0.67
RTN3-213ENST00000543552 DNAJC9Q8WXX5 260 aa10.85□□□□□ -0.67
RTN3-213ENST00000543552 LRTOMTQ8WZ04 291 aa10.85□□□□□ -0.67
RTN3-213ENST00000543552 DYRK2Q92630 601 aa10.85□□□□□ -0.67
RTN3-213ENST00000543552 ITPKCQ96DU7 683 aa10.85□□□□□ -0.67
RTN3-213ENST00000543552 HIST1H2AAQ96QV6 131 aa10.85□□□□□ -0.67
RTN3-213ENST00000543552 CHIAQ9BZP6 476 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms