RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 RELAQ04206 551 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 OGFOD3Q6PK18 319 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 GABRG1Q8N1C3 465 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 RBMXL3Q8N7X1 1067 aaKnown RBP6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 OR1F12Q8NHA8 337 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 PBOV1Q9GZY1 135 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 OR51J1Q9H342 316 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 FN3KRPQ9HA64 309 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 CPNE5Q9HCH3 593 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 C1orf123Q9NWV4 160 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 A0A0B4J2E0 115 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 A0A1B0GX12 115 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 A0A1W2PR80 420 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 MSTNO14793 375 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 ACTL6AO96019 429 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 OPRM1P35372 400 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 ACSM1Q08AH1 577 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 HFEQ30201 348 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 OR2Z1Q8NG97 314 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 OR6S1Q8NH40 331 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 UBE2FQ969M7 185 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 AGAP14A8MT82 685 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 FXYD1O00168 92 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 PHF1O43189 567 aaPredicted RBP6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 TGOLN2O43493 480 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 NDUFB3O43676 98 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 CRYBA1P05813 215 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 PCSK6P29122 969 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 ZNF121P58317 390 aaPredicted RBP6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 RAE1P78406 368 aaKnown RBP6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 RAB32Q13637 225 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 SLC17A1Q14916 467 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 ZIC1Q15915 447 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 GAB4Q2WGN9 574 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 LRRC10Q5BKY1 277 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 SH2D5Q6ZV89 423 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 PRSS35Q8N3Z0 413 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 BCL2L2Q92843 193 aaPredicted RBP6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 NARFLQ9H6Q4 476 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 SLC25A19Q9HC21 320 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 GPATCH2Q9NW75 528 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 LIPGQ9Y5X9 500 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 OR2M5A3KFT3 312 aa6.18□□□□□ -1.42
SRGAP1-206ENST00000543397 ZAR1LA6NP61 321 aa6.18□□□□□ -1.42
SRGAP1-206ENST00000543397 IMPA2O14732 288 aa6.18□□□□□ -1.42
SRGAP1-206ENST00000543397 PPIHO43447 177 aaKnown RBP6.18□□□□□ -1.42
SRGAP1-206ENST00000543397 CSF3P09919 207 aa6.18□□□□□ -1.42
SRGAP1-206ENST00000543397 CT45A6P0DMU7 189 aa6.18□□□□□ -1.42
SRGAP1-206ENST00000543397 CT45A5P0DMU8 189 aa6.18□□□□□ -1.42
SRGAP1-206ENST00000543397 CT45A7P0DMV0 189 aa6.18□□□□□ -1.42
SRGAP1-206ENST00000543397 CT45A8P0DMV1 189 aa6.18□□□□□ -1.42
SRGAP1-206ENST00000543397 CT45A9P0DMV2 189 aa6.18□□□□□ -1.42
SRGAP1-206ENST00000543397 NR4A2P43354 598 aa6.18□□□□□ -1.42
SRGAP1-206ENST00000543397 MAGEB1P43366 347 aa6.18□□□□□ -1.42
SRGAP1-206ENST00000543397 RPL11P62913 178 aaKnown RBP6.18□□□□□ -1.42
SRGAP1-206ENST00000543397 TOMM34Q15785 309 aaPredicted RBP6.18□□□□□ -1.42
SRGAP1-206ENST00000543397 CT45A2Q5DJT8 189 aa6.18□□□□□ -1.42
SRGAP1-206ENST00000543397 CT45A1Q5HYN5 189 aa6.18□□□□□ -1.42
SRGAP1-206ENST00000543397 SHEQ5VZ18 495 aa6.18□□□□□ -1.42
SRGAP1-206ENST00000543397 STEAP1BQ6NZ63 245 aa6.18□□□□□ -1.42
SRGAP1-206ENST00000543397 CT45A3Q8NHU0 189 aa6.18□□□□□ -1.42
SRGAP1-206ENST00000543397 SPACA5Q96QH8 159 aa6.18□□□□□ -1.42
SRGAP1-206ENST00000543397 NMNAT2Q9BZQ4 307 aa6.18□□□□□ -1.42
SRGAP1-206ENST00000543397 PLK3Q9H4B4 646 aa6.18□□□□□ -1.42
SRGAP1-206ENST00000543397 ING1Q9UK53 422 aaPredicted RBP6.18□□□□□ -1.42
SRGAP1-206ENST00000543397 ARRDC5A6NEK1 342 aa6.18□□□□□ -1.42
SRGAP1-206ENST00000543397 GALR2O43603 387 aaPredicted RBP6.18□□□□□ -1.42
SRGAP1-206ENST00000543397 SRP14P37108 136 aaKnown RBP6.18□□□□□ -1.42
SRGAP1-206ENST00000543397 MAGEA5P43359 124 aa6.18□□□□□ -1.42
SRGAP1-206ENST00000543397 RAC3P60763 192 aa6.18□□□□□ -1.42
SRGAP1-206ENST00000543397 OTPQ5XKR4 325 aa6.18□□□□□ -1.42
SRGAP1-206ENST00000543397 HEPHL1Q6MZM0 1159 aa6.18□□□□□ -1.42
SRGAP1-206ENST00000543397 ADPRHL1Q8NDY3 354 aa6.18□□□□□ -1.42
SRGAP1-206ENST00000543397 ASB5Q8WWX0 329 aa6.18□□□□□ -1.42
SRGAP1-206ENST00000543397 C5orf30Q96GV9 206 aa6.18□□□□□ -1.42
SRGAP1-206ENST00000543397 SMIM3Q9BZL3 60 aa6.18□□□□□ -1.42
SRGAP1-206ENST00000543397 RAB1BQ9H0U4 201 aa6.18□□□□□ -1.42
SRGAP1-206ENST00000543397 MMP28Q9H239 520 aa6.18□□□□□ -1.42
SRGAP1-206ENST00000543397 HIF1ANQ9NWT6 349 aa6.18□□□□□ -1.42
SRGAP1-206ENST00000543397 SLCO1C1Q9NYB5 712 aa6.18□□□□□ -1.42
SRGAP1-206ENST00000543397 FER1L6Q2WGJ9 1857 aa6.18□□□□□ -1.42
SRGAP1-206ENST00000543397 CCL21O00585 134 aa6.18□□□□□ -1.42
SRGAP1-206ENST00000543397 WDR1O75083 606 aa6.18□□□□□ -1.42
SRGAP1-206ENST00000543397 CT62P0C5K7 136 aa6.18□□□□□ -1.42
SRGAP1-206ENST00000543397 VPREB1P12018 145 aa6.18□□□□□ -1.42
SRGAP1-206ENST00000543397 DTYMKP23919 212 aa6.18□□□□□ -1.42
SRGAP1-206ENST00000543397 GPR12P47775 334 aa6.18□□□□□ -1.42
SRGAP1-206ENST00000543397 HBG1P69891 147 aa6.18□□□□□ -1.42
SRGAP1-206ENST00000543397 HBG2P69892 147 aa6.18□□□□□ -1.42
SRGAP1-206ENST00000543397 GUK1Q16774 197 aa6.18□□□□□ -1.42
SRGAP1-206ENST00000543397 OR2AK2Q8NG84 335 aa6.18□□□□□ -1.42
SRGAP1-206ENST00000543397 OR13G1Q8NGZ3 307 aa6.18□□□□□ -1.42
SRGAP1-206ENST00000543397 OR51H1Q8NH63 302 aa6.18□□□□□ -1.42
SRGAP1-206ENST00000543397 DNASE2BQ8WZ79 361 aa6.18□□□□□ -1.42
SRGAP1-206ENST00000543397 GATA6Q92908 595 aa6.18□□□□□ -1.42
SRGAP1-206ENST00000543397 ARHGDIGQ99819 225 aa6.18□□□□□ -1.42
SRGAP1-206ENST00000543397 SIAEQ9HAT2 523 aa6.18□□□□□ -1.42
SRGAP1-206ENST00000543397 NUP214P35658 2090 aaPredicted RBP6.18□□□□□ -1.42
SRGAP1-206ENST00000543397 FITM1A5D6W6 292 aa6.18□□□□□ -1.42
SRGAP1-206ENST00000543397 A8MXE2 369 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms