RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 PMF1-BGLAPU3KQ54 211 aa19.73■□□□□ 0.75
HOMER3-205ENST00000542541 HRNRQ86YZ3 2850 aaPredicted RBP19.73■□□□□ 0.75
HOMER3-205ENST00000542541 ZNF879B4DU55 563 aa19.73■□□□□ 0.75
HOMER3-205ENST00000542541 SOD3P08294 240 aa19.73■□□□□ 0.75
HOMER3-205ENST00000542541 ALDH3B1P43353 468 aa19.73■□□□□ 0.75
HOMER3-205ENST00000542541 SOX2P48431 317 aa19.73■□□□□ 0.75
HOMER3-205ENST00000542541 ACSM3Q53FZ2 586 aa19.73■□□□□ 0.75
HOMER3-205ENST00000542541 PP6455Q8WZ26 134 aa19.73■□□□□ 0.75
HOMER3-205ENST00000542541 TMEM106AQ96A25 262 aa19.73■□□□□ 0.75
HOMER3-205ENST00000542541 TRAF4Q9BUZ4 470 aaPredicted RBP19.73■□□□□ 0.75
HOMER3-205ENST00000542541 PAPOLGQ9BWT3 736 aaKnown RBP19.73■□□□□ 0.75
HOMER3-205ENST00000542541 ABCB9Q9NP78 766 aa19.73■□□□□ 0.75
HOMER3-205ENST00000542541 ZDHHC8Q9ULC8 765 aa19.73■□□□□ 0.75
HOMER3-205ENST00000542541 EDARQ9UNE0 448 aa19.73■□□□□ 0.75
HOMER3-205ENST00000542541 RHBDD3Q9Y3P4 386 aa19.73■□□□□ 0.75
HOMER3-205ENST00000542541 MPC1Q9Y5U8 109 aa19.73■□□□□ 0.75
HOMER3-205ENST00000542541 GATBO75879 557 aaKnown RBP19.72■□□□□ 0.75
HOMER3-205ENST00000542541 RPL5P46777 297 aaKnown RBP19.72■□□□□ 0.75
HOMER3-205ENST00000542541 ZNF81P51508 661 aa19.72■□□□□ 0.75
HOMER3-205ENST00000542541 RPS25P62851 125 aaKnown RBP19.72■□□□□ 0.75
HOMER3-205ENST00000542541 CLVS2Q5SYC1 327 aa19.72■□□□□ 0.75
HOMER3-205ENST00000542541 SERPINA12Q8IW75 414 aa19.72■□□□□ 0.75
HOMER3-205ENST00000542541 PARP16Q8N5Y8 322 aa19.72■□□□□ 0.75
HOMER3-205ENST00000542541 OR5D14Q8NGL3 314 aa19.72■□□□□ 0.75
HOMER3-205ENST00000542541 OR13C5Q8NGS8 318 aa19.72■□□□□ 0.75
HOMER3-205ENST00000542541 PIGCQ92535 297 aa19.72■□□□□ 0.75
HOMER3-205ENST00000542541 DIRC2Q96SL1 478 aa19.72■□□□□ 0.75
HOMER3-205ENST00000542541 MSL2Q9HCI7 577 aa19.72■□□□□ 0.75
HOMER3-205ENST00000542541 CENPEQ02224 2701 aa19.71■□□□□ 0.75
HOMER3-205ENST00000542541 GMDSO60547 372 aa19.71■□□□□ 0.75
HOMER3-205ENST00000542541 LILRA1O75019 489 aa19.71■□□□□ 0.75
HOMER3-205ENST00000542541 RGS9O75916 674 aaPredicted RBP19.71■□□□□ 0.75
HOMER3-205ENST00000542541 CD8AP01732 235 aa19.71■□□□□ 0.75
HOMER3-205ENST00000542541 RAF1P04049 648 aa19.71■□□□□ 0.75
HOMER3-205ENST00000542541 CD36P16671 472 aa19.71■□□□□ 0.75
HOMER3-205ENST00000542541 CA6P23280 308 aa19.71■□□□□ 0.75
HOMER3-205ENST00000542541 PAMR1Q6UXH9 720 aa19.71■□□□□ 0.75
HOMER3-205ENST00000542541 PHYHIPQ92561 330 aa19.71■□□□□ 0.75
HOMER3-205ENST00000542541 HIST1H2AAQ96QV6 131 aa19.71■□□□□ 0.75
HOMER3-205ENST00000542541 OR14A2Q96R54 314 aa19.71■□□□□ 0.75
HOMER3-205ENST00000542541 ANKRD61A6NGH8 418 aa19.7■□□□□ 0.74
HOMER3-205ENST00000542541 ANXA2P2A6NMY6 339 aa19.7■□□□□ 0.74
HOMER3-205ENST00000542541 LMX1BO60663 402 aa19.7■□□□□ 0.74
HOMER3-205ENST00000542541 NRASP01111 189 aa19.7■□□□□ 0.74
HOMER3-205ENST00000542541 GALP22466 123 aa19.7■□□□□ 0.74
HOMER3-205ENST00000542541 ALDH3B2P48448 385 aa19.7■□□□□ 0.74
HOMER3-205ENST00000542541 TMEM42Q69YG0 159 aa19.7■□□□□ 0.74
HOMER3-205ENST00000542541 C11orf71Q6IPW1 123 aa19.7■□□□□ 0.74
HOMER3-205ENST00000542541 SPERTQ8NA61 448 aa19.7■□□□□ 0.74
HOMER3-205ENST00000542541 ADAT3Q96EY9 351 aaPredicted RBP19.7■□□□□ 0.74
HOMER3-205ENST00000542541 TECTBQ96PL2 329 aa19.7■□□□□ 0.74
HOMER3-205ENST00000542541 CHST5Q9GZS9 411 aa19.7■□□□□ 0.74
HOMER3-205ENST00000542541 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP19.69■□□□□ 0.74
HOMER3-205ENST00000542541 A0A1B0GWJ7 208 aa19.69■□□□□ 0.74
HOMER3-205ENST00000542541 A6NIN4 97 aa19.69■□□□□ 0.74
HOMER3-205ENST00000542541 ZNF850A8MQ14 1090 aa19.69■□□□□ 0.74
HOMER3-205ENST00000542541 NAT2P11245 290 aa19.69■□□□□ 0.74
HOMER3-205ENST00000542541 MAGEB1P43366 347 aa19.69■□□□□ 0.74
HOMER3-205ENST00000542541 PPOXP50336 477 aa19.69■□□□□ 0.74
HOMER3-205ENST00000542541 PRDX4Q13162 271 aa19.69■□□□□ 0.74
HOMER3-205ENST00000542541 OR8G1Q15617 311 aa19.69■□□□□ 0.74
HOMER3-205ENST00000542541 CD200R1LQ6Q8B3 271 aa19.69■□□□□ 0.74
HOMER3-205ENST00000542541 UNQ9370/PRO34162Q6UXP9 181 aa19.69■□□□□ 0.74
HOMER3-205ENST00000542541 Q6ZR03 302 aa19.69■□□□□ 0.74
HOMER3-205ENST00000542541 CEACAM19Q7Z692 300 aa19.69■□□□□ 0.74
HOMER3-205ENST00000542541 OR13F1Q8NGS4 319 aa19.69■□□□□ 0.74
HOMER3-205ENST00000542541 CKLFQ9UBR5 152 aa19.69■□□□□ 0.74
HOMER3-205ENST00000542541 STUB1Q9UNE7 303 aa19.69■□□□□ 0.74
HOMER3-205ENST00000542541 FBN2P35556 2912 aa19.69■□□□□ 0.74
HOMER3-205ENST00000542541 TRDV1A0A1B0GX56 115 aa19.69■□□□□ 0.74
HOMER3-205ENST00000542541 ZSCAN5BA6NJL1 495 aa19.69■□□□□ 0.74
HOMER3-205ENST00000542541 C17orf100A8MU93 164 aa19.69■□□□□ 0.74
HOMER3-205ENST00000542541 SC5DO75845 299 aa19.69■□□□□ 0.74
HOMER3-205ENST00000542541 ERCC1P07992 297 aaPredicted RBP19.69■□□□□ 0.74
HOMER3-205ENST00000542541 TNFSF4P23510 183 aa19.69■□□□□ 0.74
HOMER3-205ENST00000542541 FABP5Q01469 135 aa19.69■□□□□ 0.74
HOMER3-205ENST00000542541 MZT1Q08AG7 82 aa19.69■□□□□ 0.74
HOMER3-205ENST00000542541 TIMM50Q3ZCQ8 353 aa19.69■□□□□ 0.74
HOMER3-205ENST00000542541 UTS2BQ765I0 119 aa19.69■□□□□ 0.74
HOMER3-205ENST00000542541 GPR141Q7Z602 305 aa19.69■□□□□ 0.74
HOMER3-205ENST00000542541 ZDHHC23Q8IYP9 409 aa19.69■□□□□ 0.74
HOMER3-205ENST00000542541 OR2Z1Q8NG97 314 aa19.69■□□□□ 0.74
HOMER3-205ENST00000542541 OR8S1Q8NH09 359 aa19.69■□□□□ 0.74
HOMER3-205ENST00000542541 DERL3Q96Q80 235 aa19.69■□□□□ 0.74
HOMER3-205ENST00000542541 CCL19Q99731 98 aa19.69■□□□□ 0.74
HOMER3-205ENST00000542541 NEK6Q9HC98 313 aa19.69■□□□□ 0.74
HOMER3-205ENST00000542541 GABRPO00591 440 aa19.68■□□□□ 0.74
HOMER3-205ENST00000542541 ADH4P08319 380 aa19.68■□□□□ 0.74
HOMER3-205ENST00000542541 TGFBR2P37173 567 aa19.68■□□□□ 0.74
HOMER3-205ENST00000542541 PCGF3Q3KNV8 242 aa19.68■□□□□ 0.74
HOMER3-205ENST00000542541 YIPF6Q96EC8 236 aa19.68■□□□□ 0.74
HOMER3-205ENST00000542541 ADAT1Q9BUB4 502 aaKnown RBP19.68■□□□□ 0.74
HOMER3-205ENST00000542541 ZCCHC4Q9H5U6 513 aa19.68■□□□□ 0.74
HOMER3-205ENST00000542541 NKIRAS2Q9NYR9 191 aa19.68■□□□□ 0.74
HOMER3-205ENST00000542541 SSR3Q9UNL2 185 aa19.68■□□□□ 0.74
HOMER3-205ENST00000542541 TRBV5-7A0A0A0MS05 114 aa19.67■□□□□ 0.74
HOMER3-205ENST00000542541 SPRY3O43610 288 aa19.67■□□□□ 0.74
HOMER3-205ENST00000542541 ARL6IP5O75915 188 aa19.67■□□□□ 0.74
HOMER3-205ENST00000542541 OCMP0CE72 109 aaPredicted RBP19.67■□□□□ 0.74
HOMER3-205ENST00000542541 PRF1P14222 555 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms