RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 TBX15Q96SF7 602 aa8.13□□□□□ -1.11
CHFR-220ENST00000541817 SF3B5Q9BWJ5 86 aaKnown RBP8.13□□□□□ -1.11
CHFR-220ENST00000541817 JAM3Q9BX67 310 aa8.13□□□□□ -1.11
CHFR-220ENST00000541817 LINC00470Q9BZP3 86 aa8.13□□□□□ -1.11
CHFR-220ENST00000541817 MMP28Q9H239 520 aa8.13□□□□□ -1.11
CHFR-220ENST00000541817 OR52D1Q9H346 318 aa8.13□□□□□ -1.11
CHFR-220ENST00000541817 C16orf95Q9H693 158 aa8.13□□□□□ -1.11
CHFR-220ENST00000541817 NOX4Q9NPH5 578 aa8.13□□□□□ -1.11
CHFR-220ENST00000541817 RPS6KB2Q9UBS0 482 aa8.13□□□□□ -1.11
CHFR-220ENST00000541817 ADAM30Q9UKF2 790 aa8.13□□□□□ -1.11
CHFR-220ENST00000541817 CDHR4A6H8M9 788 aa8.12□□□□□ -1.11
CHFR-220ENST00000541817 LIPT2A6NK58 231 aa8.12□□□□□ -1.11
CHFR-220ENST00000541817 PRR23D1E9PI22 279 aaPredicted RBP8.12□□□□□ -1.11
CHFR-220ENST00000541817 SLC43A1O75387 559 aa8.12□□□□□ -1.11
CHFR-220ENST00000541817 THY1P04216 161 aa8.12□□□□□ -1.11
CHFR-220ENST00000541817 SFTPBP07988 381 aa8.12□□□□□ -1.11
CHFR-220ENST00000541817 GKN3PP0CG01 181 aa8.12□□□□□ -1.11
CHFR-220ENST00000541817 LIMS3P0CW19 117 aa8.12□□□□□ -1.11
CHFR-220ENST00000541817 LIMS4P0CW20 117 aa8.12□□□□□ -1.11
CHFR-220ENST00000541817 PRR23D2P0DMB1 279 aaPredicted RBP8.12□□□□□ -1.11
CHFR-220ENST00000541817 TACR3P29371 465 aa8.12□□□□□ -1.11
CHFR-220ENST00000541817 PPP3R1P63098 170 aa8.12□□□□□ -1.11
CHFR-220ENST00000541817 PAX2Q02962 417 aa8.12□□□□□ -1.11
CHFR-220ENST00000541817 MXD1Q05195 221 aa8.12□□□□□ -1.11
CHFR-220ENST00000541817 SCN1BQ07699 218 aa8.12□□□□□ -1.11
CHFR-220ENST00000541817 GPR50Q13585 617 aa8.12□□□□□ -1.11
CHFR-220ENST00000541817 ESCO2Q56NI9 601 aa8.12□□□□□ -1.11
CHFR-220ENST00000541817 DDI2Q5TDH0 399 aa8.12□□□□□ -1.11
CHFR-220ENST00000541817 CARD17Q5XLA6 110 aa8.12□□□□□ -1.11
CHFR-220ENST00000541817 FAM131AQ6UXB0 335 aa8.12□□□□□ -1.11
CHFR-220ENST00000541817 TMPRSS11FQ6ZWK6 438 aa8.12□□□□□ -1.11
CHFR-220ENST00000541817 SHFQ7M4L6 423 aa8.12□□□□□ -1.11
CHFR-220ENST00000541817 AKAP14Q86UN6 197 aa8.12□□□□□ -1.11
CHFR-220ENST00000541817 GPR137CQ8N3F9 429 aa8.12□□□□□ -1.11
CHFR-220ENST00000541817 FGFBP3Q8TAT2 258 aa8.12□□□□□ -1.11
CHFR-220ENST00000541817 SPRYD4Q8WW59 207 aaPredicted RBP8.12□□□□□ -1.11
CHFR-220ENST00000541817 SSMEM1Q8WWF3 244 aa8.12□□□□□ -1.11
CHFR-220ENST00000541817 TMEM203Q969S6 136 aa8.12□□□□□ -1.11
CHFR-220ENST00000541817 FAM71F1Q96KD3 344 aaPredicted RBP8.12□□□□□ -1.11
CHFR-220ENST00000541817 B9D2Q9BPU9 175 aa8.12□□□□□ -1.11
CHFR-220ENST00000541817 PRSS27Q9BQR3 290 aa8.12□□□□□ -1.11
CHFR-220ENST00000541817 IFT27Q9BW83 186 aa8.12□□□□□ -1.11
CHFR-220ENST00000541817 BARHL1Q9BZE3 327 aa8.12□□□□□ -1.11
CHFR-220ENST00000541817 INPP5EQ9NRR6 644 aa8.12□□□□□ -1.11
CHFR-220ENST00000541817 ERVK13-1Q9NX77 482 aa8.12□□□□□ -1.11
CHFR-220ENST00000541817 GPR160Q9UJ42 338 aa8.12□□□□□ -1.11
CHFR-220ENST00000541817 CAB39Q9Y376 341 aaPredicted RBP8.12□□□□□ -1.11
CHFR-220ENST00000541817 SF3B6Q9Y3B4 125 aaKnown RBP8.12□□□□□ -1.11
CHFR-220ENST00000541817 POMT1Q9Y6A1 747 aa8.12□□□□□ -1.11
CHFR-220ENST00000541817 U3KQK5 164 aa8.12□□□□□ -1.11
CHFR-220ENST00000541817 IGLV3-9A0A075B6K5 115 aa8.11□□□□□ -1.11
CHFR-220ENST00000541817 IGHV2-70DA0A0C4DH43 119 aa8.11□□□□□ -1.11
CHFR-220ENST00000541817 DAPL1A0PJW8 107 aa8.11□□□□□ -1.11
CHFR-220ENST00000541817 FABP12A6NFH5 140 aa8.11□□□□□ -1.11
CHFR-220ENST00000541817 RIIAD1A6NNX1 92 aa8.11□□□□□ -1.11
CHFR-220ENST00000541817 A8MXK9 166 aa8.11□□□□□ -1.11
CHFR-220ENST00000541817 RPL36A-HNRNPH2H7BZ11 118 aa8.11□□□□□ -1.11
CHFR-220ENST00000541817 CHP2O43745 196 aa8.11□□□□□ -1.11
CHFR-220ENST00000541817 APOL3O95236 402 aa8.11□□□□□ -1.11
CHFR-220ENST00000541817 IFNGP01579 166 aa8.11□□□□□ -1.11
CHFR-220ENST00000541817 IGHA1P01876 353 aa8.11□□□□□ -1.11
CHFR-220ENST00000541817 ZNF250P15622 560 aa8.11□□□□□ -1.11
CHFR-220ENST00000541817 GALP22466 123 aa8.11□□□□□ -1.11
CHFR-220ENST00000541817 CFL1P23528 166 aaKnown RBP8.11□□□□□ -1.11
CHFR-220ENST00000541817 HTR2AP28223 471 aa8.11□□□□□ -1.11
CHFR-220ENST00000541817 SLC6A6P31641 620 aa8.11□□□□□ -1.11
CHFR-220ENST00000541817 RBM34P42696 430 aaKnown RBP8.11□□□□□ -1.11
CHFR-220ENST00000541817 ZNF81P51508 661 aa8.11□□□□□ -1.11
CHFR-220ENST00000541817 SELENOVP59797 346 aa8.11□□□□□ -1.11
CHFR-220ENST00000541817 FGF12P61328 243 aa8.11□□□□□ -1.11
CHFR-220ENST00000541817 RAB1AP62820 205 aa8.11□□□□□ -1.11
CHFR-220ENST00000541817 BDH1Q02338 343 aa8.11□□□□□ -1.11
CHFR-220ENST00000541817 PLAURQ03405 335 aa8.11□□□□□ -1.11
CHFR-220ENST00000541817 TRAM1Q15629 374 aa8.11□□□□□ -1.11
CHFR-220ENST00000541817 ZNF141Q15928 474 aa8.11□□□□□ -1.11
CHFR-220ENST00000541817 TMEM255AQ5JRV8 349 aa8.11□□□□□ -1.11
CHFR-220ENST00000541817 GPR157Q5UAW9 335 aa8.11□□□□□ -1.11
CHFR-220ENST00000541817 DHRS7BQ6IAN0 325 aaPredicted RBP8.11□□□□□ -1.11
CHFR-220ENST00000541817 PLBD1Q6P4A8 553 aa8.11□□□□□ -1.11
CHFR-220ENST00000541817 SMARCD3Q6STE5 483 aa8.11□□□□□ -1.11
CHFR-220ENST00000541817 METAP1DQ6UB28 335 aaPredicted RBP8.11□□□□□ -1.11
CHFR-220ENST00000541817 BTNL3Q6UXE8 466 aa8.11□□□□□ -1.11
CHFR-220ENST00000541817 LRRN1Q6UXK5 716 aa8.11□□□□□ -1.11
CHFR-220ENST00000541817 ZNF813Q6ZN06 617 aa8.11□□□□□ -1.11
CHFR-220ENST00000541817 ZNF584Q8IVC4 421 aa8.11□□□□□ -1.11
CHFR-220ENST00000541817 CMIPQ8IY22 773 aa8.11□□□□□ -1.11
CHFR-220ENST00000541817 MUC20Q8N307 709 aaPredicted RBP8.11□□□□□ -1.11
CHFR-220ENST00000541817 LNX2Q8N448 690 aa8.11□□□□□ -1.11
CHFR-220ENST00000541817 ACBD7Q8N6N7 88 aa8.11□□□□□ -1.11
CHFR-220ENST00000541817 GDPD1Q8N9F7 314 aa8.11□□□□□ -1.11
CHFR-220ENST00000541817 CHAC2Q8WUX2 184 aa8.11□□□□□ -1.11
CHFR-220ENST00000541817 CNOT9Q92600 299 aaKnown RBP8.11□□□□□ -1.11
CHFR-220ENST00000541817 SLC35B4Q969S0 331 aa8.11□□□□□ -1.11
CHFR-220ENST00000541817 BPIFA2Q96DR5 249 aa8.11□□□□□ -1.11
CHFR-220ENST00000541817 DIRAS2Q96HU8 199 aa8.11□□□□□ -1.11
CHFR-220ENST00000541817 TXNDC15Q96J42 360 aa8.11□□□□□ -1.11
CHFR-220ENST00000541817 OCSTAMPQ9BR26 566 aa8.11□□□□□ -1.11
CHFR-220ENST00000541817 PCGF1Q9BSM1 259 aa8.11□□□□□ -1.11
CHFR-220ENST00000541817 RERGLQ9H628 205 aa8.11□□□□□ -1.11
CHFR-220ENST00000541817 ABCB9Q9NP78 766 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms