RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 PF4V1P10720 104 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 EPXP11678 715 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 THBS2P35442 1172 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 HINT1P49773 126 aaPredicted RBP5.47□□□□□ -1.53
PTPRD-214ENST00000540109 FAM3BP58499 235 aaPredicted RBP5.47□□□□□ -1.53
PTPRD-214ENST00000540109 TNFRSF9Q07011 255 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 ELOCQ15369 112 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 EMC4Q5J8M3 183 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 NKAIN2Q5VXU1 208 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 CFAP161Q6P656 301 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 RABEPKQ7Z6M1 372 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 CSNK1A1LQ8N752 337 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 OR5D14Q8NGL3 314 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 NUDT11Q96G61 164 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 COL25A1Q9BXS0 654 aaPredicted RBP5.47□□□□□ -1.53
PTPRD-214ENST00000540109 SELENOIQ9C0D9 397 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 CDC42EP3Q9UKI2 254 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 HSF4Q9ULV5 492 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 A4GNTQ9UNA3 340 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 OTOL1A6NHN0 477 aaPredicted RBP5.46□□□□□ -1.53
PTPRD-214ENST00000540109 ANKRD34CP0C6C1 535 aa5.46□□□□□ -1.53
PTPRD-214ENST00000540109 SEC11BP0C7V7 166 aa5.46□□□□□ -1.53
PTPRD-214ENST00000540109 PLAC9Q5JTB6 97 aa5.46□□□□□ -1.53
PTPRD-214ENST00000540109 FAM219BQ5XKK7 198 aa5.46□□□□□ -1.53
PTPRD-214ENST00000540109 ERASQ7Z444 233 aa5.46□□□□□ -1.53
PTPRD-214ENST00000540109 TRAPPC6BQ86SZ2 158 aa5.46□□□□□ -1.53
PTPRD-214ENST00000540109 ACOT4Q8N9L9 421 aa5.46□□□□□ -1.53
PTPRD-214ENST00000540109 CDRT4Q8N9R6 151 aa5.46□□□□□ -1.53
PTPRD-214ENST00000540109 NUDCD2Q8WVJ2 157 aa5.46□□□□□ -1.53
PTPRD-214ENST00000540109 SEH1LQ96EE3 360 aa5.46□□□□□ -1.53
PTPRD-214ENST00000540109 GPR174Q9BXC1 333 aa5.46□□□□□ -1.53
PTPRD-214ENST00000540109 CHST6Q9GZX3 395 aa5.46□□□□□ -1.53
PTPRD-214ENST00000540109 CHST11Q9NPF2 352 aa5.46□□□□□ -1.53
PTPRD-214ENST00000540109 A6NNC1 897 aa5.46□□□□□ -1.53
PTPRD-214ENST00000540109 PYCARD-AS1I3L0S3 204 aa5.46□□□□□ -1.53
PTPRD-214ENST00000540109 DNASE2O00115 360 aaPredicted RBP5.46□□□□□ -1.53
PTPRD-214ENST00000540109 PRKRAO75569 313 aaKnown RBP5.46□□□□□ -1.53
PTPRD-214ENST00000540109 ASGR2P07307 311 aa5.46□□□□□ -1.53
PTPRD-214ENST00000540109 OR4E1P0C645 316 aa5.46□□□□□ -1.53
PTPRD-214ENST00000540109 LIMS3P0CW19 117 aa5.46□□□□□ -1.53
PTPRD-214ENST00000540109 LIMS4P0CW20 117 aa5.46□□□□□ -1.53
PTPRD-214ENST00000540109 MYOGP15173 224 aa5.46□□□□□ -1.53
PTPRD-214ENST00000540109 METAP1P53582 386 aa5.46□□□□□ -1.53
PTPRD-214ENST00000540109 ATP5IP56385 69 aaPredicted RBP5.46□□□□□ -1.53
PTPRD-214ENST00000540109 ZNF322Q6U7Q0 402 aaPredicted RBP5.46□□□□□ -1.53
PTPRD-214ENST00000540109 PARM1Q6UWI2 310 aa5.46□□□□□ -1.53
PTPRD-214ENST00000540109 MMP21Q8N119 569 aa5.46□□□□□ -1.53
PTPRD-214ENST00000540109 LRRC25Q8N386 305 aaPredicted RBP5.46□□□□□ -1.53
PTPRD-214ENST00000540109 SLC38A5Q8WUX1 472 aa5.46□□□□□ -1.53
PTPRD-214ENST00000540109 FAM122AQ96E09 287 aa5.46□□□□□ -1.53
PTPRD-214ENST00000540109 KTI12Q96EK9 354 aaPredicted RBP5.46□□□□□ -1.53
PTPRD-214ENST00000540109 TBX15Q96SF7 602 aa5.46□□□□□ -1.53
PTPRD-214ENST00000540109 ARHGDIGQ99819 225 aa5.46□□□□□ -1.53
PTPRD-214ENST00000540109 HCAR1Q9BXC0 346 aa5.46□□□□□ -1.53
PTPRD-214ENST00000540109 TMEM9BQ9NQ34 198 aa5.46□□□□□ -1.53
PTPRD-214ENST00000540109 ACER3Q9NUN7 267 aa5.46□□□□□ -1.53
PTPRD-214ENST00000540109 KLK11Q9UBX7 282 aa5.46□□□□□ -1.53
PTPRD-214ENST00000540109 GPR55Q9Y2T6 319 aaPredicted RBP5.46□□□□□ -1.53
PTPRD-214ENST00000540109 TCF20Q9UGU0 1960 aaKnown RBP5.46□□□□□ -1.54
PTPRD-214ENST00000540109 GLOD5A6NK44 160 aa5.46□□□□□ -1.54
PTPRD-214ENST00000540109 FRS3O43559 492 aa5.46□□□□□ -1.54
PTPRD-214ENST00000540109 ZNF217O75362 1048 aa5.46□□□□□ -1.54
PTPRD-214ENST00000540109 MPC2O95563 127 aa5.46□□□□□ -1.54
PTPRD-214ENST00000540109 PPP1R3DO95685 299 aa5.46□□□□□ -1.54
PTPRD-214ENST00000540109 MDKP21741 143 aaPredicted RBP5.46□□□□□ -1.54
PTPRD-214ENST00000540109 GLYR1Q49A26 553 aaPredicted RBP5.46□□□□□ -1.54
PTPRD-214ENST00000540109 PODNL1Q6PEZ8 512 aa5.46□□□□□ -1.54
PTPRD-214ENST00000540109 BRICD5Q6PL45 260 aa5.46□□□□□ -1.54
PTPRD-214ENST00000540109 FBXW12Q6X9E4 464 aa5.46□□□□□ -1.54
PTPRD-214ENST00000540109 LINC01555Q8NAE3 123 aa5.46□□□□□ -1.54
PTPRD-214ENST00000540109 OR52R1Q8NGF1 315 aa5.46□□□□□ -1.54
PTPRD-214ENST00000540109 LMX1AQ8TE12 382 aa5.46□□□□□ -1.54
PTPRD-214ENST00000540109 CDS1Q92903 461 aa5.46□□□□□ -1.54
PTPRD-214ENST00000540109 SIGLEC11Q96RL6 698 aa5.46□□□□□ -1.54
PTPRD-214ENST00000540109 CITED2Q99967 270 aaPredicted RBP5.46□□□□□ -1.54
PTPRD-214ENST00000540109 PLA2G2FQ9BZM2 168 aa5.46□□□□□ -1.54
PTPRD-214ENST00000540109 MYOZ1Q9NP98 299 aaPredicted RBP5.46□□□□□ -1.54
PTPRD-214ENST00000540109 TP53TG5Q9Y2B4 290 aa5.46□□□□□ -1.54
PTPRD-214ENST00000540109 LRRK1Q38SD2 2015 aa5.46□□□□□ -1.54
PTPRD-214ENST00000540109 ZNF727A8MUV8 499 aa5.46□□□□□ -1.54
PTPRD-214ENST00000540109 H2BFMP0C1H6 154 aa5.46□□□□□ -1.54
PTPRD-214ENST00000540109 BCL6P41182 706 aa5.46□□□□□ -1.54
PTPRD-214ENST00000540109 ERVFRD-1P60508 538 aa5.46□□□□□ -1.54
PTPRD-214ENST00000540109 TGIF1Q15583 401 aa5.46□□□□□ -1.54
PTPRD-214ENST00000540109 MLF2Q15773 248 aaPredicted RBP5.46□□□□□ -1.54
PTPRD-214ENST00000540109 RTL8BQ17RB0 113 aa5.46□□□□□ -1.54
PTPRD-214ENST00000540109 IAH1Q2TAA2 248 aaPredicted RBP5.46□□□□□ -1.54
PTPRD-214ENST00000540109 HLA-BQ31612 363 aa5.46□□□□□ -1.54
PTPRD-214ENST00000540109 C9orf50Q5SZB4 431 aa5.46□□□□□ -1.54
PTPRD-214ENST00000540109 KIAA0895LQ68EN5 471 aa5.46□□□□□ -1.54
PTPRD-214ENST00000540109 DPY19L2P2Q6ZN68 376 aa5.46□□□□□ -1.54
PTPRD-214ENST00000540109 CPEB2Q7Z5Q1 589 aaKnown RBP5.46□□□□□ -1.54
PTPRD-214ENST00000540109 ZNF695Q8IW36 515 aa5.46□□□□□ -1.54
PTPRD-214ENST00000540109 C19orf47Q8N9M1 422 aaKnown RBP5.46□□□□□ -1.54
PTPRD-214ENST00000540109 Q8NFD4 153 aa5.46□□□□□ -1.54
PTPRD-214ENST00000540109 OR5R1Q8NH85 324 aa5.46□□□□□ -1.54
PTPRD-214ENST00000540109 HSD17B8Q92506 261 aa5.46□□□□□ -1.54
PTPRD-214ENST00000540109 KCNJ15Q99712 375 aa5.46□□□□□ -1.54
PTPRD-214ENST00000540109 RAB33BQ9H082 229 aa5.46□□□□□ -1.54
PTPRD-214ENST00000540109 FBXO4Q9UKT5 387 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms