RNA–Protein interactions for RNA: ENST00000540021.5

MSH6-210, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 3,930 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-210ENST00000540021 LANCL3Q6ZV70 420 aa11.55□□□□□ -0.56
MSH6-210ENST00000540021 C20orf196Q8IYI0 205 aa11.55□□□□□ -0.56
MSH6-210ENST00000540021 SEC11CQ9BY50 192 aa11.55□□□□□ -0.56
MSH6-210ENST00000540021 TGIF2Q9GZN2 237 aa11.55□□□□□ -0.56
MSH6-210ENST00000540021 RP1L1Q8IWN7 2480 aaPredicted RBP11.55□□□□□ -0.56
MSH6-210ENST00000540021 RAB27BO00194 218 aa11.54□□□□□ -0.56
MSH6-210ENST00000540021 HSPB6O14558 160 aa11.54□□□□□ -0.56
MSH6-210ENST00000540021 PHF1O43189 567 aaPredicted RBP11.54□□□□□ -0.56
MSH6-210ENST00000540021 C1QL1O75973 258 aa11.54□□□□□ -0.56
MSH6-210ENST00000540021 JTBO76095 146 aa11.54□□□□□ -0.56
MSH6-210ENST00000540021 LCATP04180 440 aa11.54□□□□□ -0.56
MSH6-210ENST00000540021 IGFBP4P22692 258 aa11.54□□□□□ -0.56
MSH6-210ENST00000540021 GAB4Q2WGN9 574 aa11.54□□□□□ -0.56
MSH6-210ENST00000540021 TSPO2Q5TGU0 170 aa11.54□□□□□ -0.56
MSH6-210ENST00000540021 RAET1LQ5VY80 246 aa11.54□□□□□ -0.56
MSH6-210ENST00000540021 ZNF561Q8N587 486 aa11.54□□□□□ -0.56
MSH6-210ENST00000540021 REEP6Q96HR9 211 aa11.54□□□□□ -0.56
MSH6-210ENST00000540021 IGHV5-51A0A0C4DH38 117 aa11.54□□□□□ -0.56
MSH6-210ENST00000540021 NPIPA2E9PIF3 369 aa11.54□□□□□ -0.56
MSH6-210ENST00000540021 NPIPA3F8WFD2 350 aa11.54□□□□□ -0.56
MSH6-210ENST00000540021 K7EQS6 105 aa11.54□□□□□ -0.56
MSH6-210ENST00000540021 LINC01565O15544 149 aa11.54□□□□□ -0.56
MSH6-210ENST00000540021 HSPA12AO43301 675 aa11.54□□□□□ -0.56
MSH6-210ENST00000540021 RBMXL2O75526 392 aaKnown RBP11.54□□□□□ -0.56
MSH6-210ENST00000540021 RAD51DO75771 328 aa11.54□□□□□ -0.56
MSH6-210ENST00000540021 S100PP25815 95 aa11.54□□□□□ -0.56
MSH6-210ENST00000540021 PNLIPRP2P54317 469 aa11.54□□□□□ -0.56
MSH6-210ENST00000540021 NKX6-1P78426 367 aaPredicted RBP11.54□□□□□ -0.56
MSH6-210ENST00000540021 GUK1Q16774 197 aa11.54□□□□□ -0.56
MSH6-210ENST00000540021 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.54□□□□□ -0.56
MSH6-210ENST00000540021 GPR157Q5UAW9 335 aa11.54□□□□□ -0.56
MSH6-210ENST00000540021 OR2A2Q6IF42 318 aa11.54□□□□□ -0.56
MSH6-210ENST00000540021 SLC30A7Q8NEW0 376 aa11.54□□□□□ -0.56
MSH6-210ENST00000540021 STT3BQ8TCJ2 826 aa11.54□□□□□ -0.56
MSH6-210ENST00000540021 LIN37Q96GY3 246 aaPredicted RBP11.54□□□□□ -0.56
MSH6-210ENST00000540021 ZMAT5Q9UDW3 170 aaKnown RBP11.54□□□□□ -0.56
MSH6-210ENST00000540021 S100A8P05109 93 aa11.54□□□□□ -0.56
MSH6-210ENST00000540021 HIST1H1DP16402 221 aaKnown RBP11.54□□□□□ -0.56
MSH6-210ENST00000540021 FAHP16930 419 aa11.54□□□□□ -0.56
MSH6-210ENST00000540021 TAGLN2P37802 199 aaKnown RBP11.54□□□□□ -0.56
MSH6-210ENST00000540021 TNFRSF4P43489 277 aa11.54□□□□□ -0.56
MSH6-210ENST00000540021 AFF3P51826 1226 aaKnown RBP11.54□□□□□ -0.56
MSH6-210ENST00000540021 CLDN17P56750 224 aa11.54□□□□□ -0.56
MSH6-210ENST00000540021 TMEM33P57088 247 aa11.54□□□□□ -0.56
MSH6-210ENST00000540021 RPUSD3Q6P087 351 aaKnown RBP11.54□□□□□ -0.56
MSH6-210ENST00000540021 DRAM2Q6UX65 266 aa11.54□□□□□ -0.56
MSH6-210ENST00000540021 HIST2H3AQ71DI3 136 aa11.54□□□□□ -0.56
MSH6-210ENST00000540021 BHLHE23Q8NDY6 225 aa11.54□□□□□ -0.56
MSH6-210ENST00000540021 OR8U1Q8NH10 309 aa11.54□□□□□ -0.56
MSH6-210ENST00000540021 A0A1W2PPE2 198 aa11.54□□□□□ -0.56
MSH6-210ENST00000540021 HSPB2A8KAH6 182 aa11.54□□□□□ -0.56
MSH6-210ENST00000540021 EIF4E2O60573 245 aaKnown RBP11.54□□□□□ -0.56
MSH6-210ENST00000540021 LPAR6P43657 344 aa11.54□□□□□ -0.56
MSH6-210ENST00000540021 RPS4XP62701 263 aaKnown RBP11.54□□□□□ -0.56
MSH6-210ENST00000540021 HSPB2Q16082 182 aa11.54□□□□□ -0.56
MSH6-210ENST00000540021 SLC26A10Q8NG04 563 aa11.54□□□□□ -0.56
MSH6-210ENST00000540021 CCNL2Q96S94 520 aaPredicted RBP11.54□□□□□ -0.56
MSH6-210ENST00000540021 MAGT1Q9H0U3 335 aa11.54□□□□□ -0.56
MSH6-210ENST00000540021 GHRLQ9UBU3 117 aa11.54□□□□□ -0.56
MSH6-210ENST00000540021 PADI1Q9ULC6 663 aa11.54□□□□□ -0.56
MSH6-210ENST00000540021 TRBV11-1A0A0K0K1C0 115 aa11.53□□□□□ -0.56
MSH6-210ENST00000540021 PLPP3O14495 311 aa11.53□□□□□ -0.56
MSH6-210ENST00000540021 LY86O95711 162 aa11.53□□□□□ -0.56
MSH6-210ENST00000540021 AKR1C8PQ5T2L2 129 aa11.53□□□□□ -0.56
MSH6-210ENST00000540021 C6orf201Q7Z4U5 140 aa11.53□□□□□ -0.56
MSH6-210ENST00000540021 ZFP62Q8NB50 900 aaPredicted RBP11.53□□□□□ -0.56
MSH6-210ENST00000540021 DTWD2Q8NBA8 298 aa11.53□□□□□ -0.56
MSH6-210ENST00000540021 SGK3Q96BR1 496 aa11.53□□□□□ -0.56
MSH6-210ENST00000540021 OR10C1Q96KK4 312 aa11.53□□□□□ -0.56
MSH6-210ENST00000540021 FAM86C1Q9NVL1 165 aa11.53□□□□□ -0.56
MSH6-210ENST00000540021 C7orf77A4D0Y5 90 aa11.53□□□□□ -0.56
MSH6-210ENST00000540021 ZNF728P0DKX0 622 aa11.53□□□□□ -0.56
MSH6-210ENST00000540021 FHL1Q13642 323 aa11.53□□□□□ -0.56
MSH6-210ENST00000540021 ZNF260Q3ZCT1 412 aa11.53□□□□□ -0.56
MSH6-210ENST00000540021 RRNAD1Q96FB5 475 aaKnown RBP11.53□□□□□ -0.56
MSH6-210ENST00000540021 GPX7Q96SL4 187 aaPredicted RBP11.53□□□□□ -0.56
MSH6-210ENST00000540021 NELFAQ9H3P2 528 aa11.53□□□□□ -0.56
MSH6-210ENST00000540021 GPR173Q9NS66 373 aa11.53□□□□□ -0.56
MSH6-210ENST00000540021 SLC7A11Q9UPY5 501 aa11.53□□□□□ -0.56
MSH6-210ENST00000540021 PIGLQ9Y2B2 252 aa11.53□□□□□ -0.56
MSH6-210ENST00000540021 TMEM184BQ9Y519 407 aaPredicted RBP11.53□□□□□ -0.56
MSH6-210ENST00000540021 LINC00587B1AMM8 73 aa11.53□□□□□ -0.56
MSH6-210ENST00000540021 OR7C1O76099 320 aaPredicted RBP11.53□□□□□ -0.56
MSH6-210ENST00000540021 CD8AP01732 235 aa11.53□□□□□ -0.56
MSH6-210ENST00000540021 QDPRP09417 244 aa11.53□□□□□ -0.56
MSH6-210ENST00000540021 CALCRP30988 508 aa11.53□□□□□ -0.56
MSH6-210ENST00000540021 PIGPP57054 158 aa11.53□□□□□ -0.56
MSH6-210ENST00000540021 FOXF1Q12946 379 aa11.53□□□□□ -0.56
MSH6-210ENST00000540021 PCK2Q16822 640 aa11.53□□□□□ -0.56
MSH6-210ENST00000540021 RTN4RL2Q86UN3 420 aa11.53□□□□□ -0.56
MSH6-210ENST00000540021 ZNF695Q8IW36 515 aa11.53□□□□□ -0.56
MSH6-210ENST00000540021 EIF4E3Q8N5X7 224 aaKnown RBP11.53□□□□□ -0.56
MSH6-210ENST00000540021 PRRX2Q99811 253 aa11.53□□□□□ -0.56
MSH6-210ENST00000540021 DEFB126Q9BYW3 111 aa11.53□□□□□ -0.56
MSH6-210ENST00000540021 CHST11Q9NPF2 352 aa11.53□□□□□ -0.56
MSH6-210ENST00000540021 COL4A6Q14031 1691 aa11.52□□□□□ -0.56
MSH6-210ENST00000540021 KNTC1P50748 2209 aa11.52□□□□□ -0.56
MSH6-210ENST00000540021 NUDT19A8MXV4 375 aa11.52□□□□□ -0.56
MSH6-210ENST00000540021 BGLAPP02818 100 aa11.52□□□□□ -0.56
MSH6-210ENST00000540021 DBHP09172 617 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms