RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 A0A1W2PQM1 296 aa8.92□□□□□ -0.98
TRAF1-202ENST00000540010 RFPL4AA6NLU0 287 aa8.92□□□□□ -0.98
TRAF1-202ENST00000540010 RFPL4AL1F8VTS6 287 aa8.92□□□□□ -0.98
TRAF1-202ENST00000540010 KLF4O43474 513 aa8.92□□□□□ -0.98
TRAF1-202ENST00000540010 IL5P05113 134 aa8.92□□□□□ -0.98
TRAF1-202ENST00000540010 RPL12P30050 165 aaKnown RBP8.92□□□□□ -0.98
TRAF1-202ENST00000540010 PI4KAP42356 2102 aa8.92□□□□□ -0.98
TRAF1-202ENST00000540010 EMC4Q5J8M3 183 aa8.92□□□□□ -0.98
TRAF1-202ENST00000540010 AADACL3Q5VUY0 350 aa8.92□□□□□ -0.98
TRAF1-202ENST00000540010 C11orf87Q6NUJ2 197 aa8.92□□□□□ -0.98
TRAF1-202ENST00000540010 OPN5Q6U736 354 aa8.92□□□□□ -0.98
TRAF1-202ENST00000540010 LYG2Q86SG7 212 aa8.92□□□□□ -0.98
TRAF1-202ENST00000540010 GJC3Q8NFK1 279 aa8.92□□□□□ -0.98
TRAF1-202ENST00000540010 OR2G3Q8NGZ4 309 aa8.92□□□□□ -0.98
TRAF1-202ENST00000540010 OR51H1Q8NH63 302 aa8.92□□□□□ -0.98
TRAF1-202ENST00000540010 MALSU1Q96EH3 234 aa8.92□□□□□ -0.98
TRAF1-202ENST00000540010 LRFN5Q96NI6 719 aa8.92□□□□□ -0.98
TRAF1-202ENST00000540010 OR8B4Q96RC9 309 aa8.92□□□□□ -0.98
TRAF1-202ENST00000540010 TGIF2Q9GZN2 237 aa8.92□□□□□ -0.98
TRAF1-202ENST00000540010 SMOC1Q9H4F8 434 aa8.92□□□□□ -0.98
TRAF1-202ENST00000540010 SLC22A11Q9NSA0 550 aa8.92□□□□□ -0.98
TRAF1-202ENST00000540010 MED19A0JLT2 244 aaPredicted RBP8.92□□□□□ -0.98
TRAF1-202ENST00000540010 ST8SIA3O43173 380 aa8.92□□□□□ -0.98
TRAF1-202ENST00000540010 EFSO43281 561 aa8.92□□□□□ -0.98
TRAF1-202ENST00000540010 ALOX12BO75342 701 aa8.92□□□□□ -0.98
TRAF1-202ENST00000540010 RRASP10301 218 aa8.92□□□□□ -0.98
TRAF1-202ENST00000540010 POU3F2P20265 443 aaPredicted RBP8.92□□□□□ -0.98
TRAF1-202ENST00000540010 ETFDHQ16134 617 aa8.92□□□□□ -0.98
TRAF1-202ENST00000540010 SP6Q3SY56 376 aa8.92□□□□□ -0.98
TRAF1-202ENST00000540010 C1QL3Q5VWW1 255 aa8.92□□□□□ -0.98
TRAF1-202ENST00000540010 C5orf46Q6UWT4 87 aa8.92□□□□□ -0.98
TRAF1-202ENST00000540010 ZNF574Q6ZN55 896 aaPredicted RBP8.92□□□□□ -0.98
TRAF1-202ENST00000540010 C16orf47Q6ZP98 133 aaPredicted RBP8.92□□□□□ -0.98
TRAF1-202ENST00000540010 GVQW1Q8N7I0 195 aa8.92□□□□□ -0.98
TRAF1-202ENST00000540010 TRAF4Q9BUZ4 470 aaPredicted RBP8.92□□□□□ -0.98
TRAF1-202ENST00000540010 PADI1Q9ULC6 663 aa8.92□□□□□ -0.98
TRAF1-202ENST00000540010 LRP12Q9Y561 859 aa8.92□□□□□ -0.98
TRAF1-202ENST00000540010 TSTD3H0UI37 97 aa8.92□□□□□ -0.98
TRAF1-202ENST00000540010 ARPC3O15145 178 aa8.92□□□□□ -0.98
TRAF1-202ENST00000540010 MRPL33O75394 65 aaKnown RBP8.92□□□□□ -0.98
TRAF1-202ENST00000540010 GALP22466 123 aa8.92□□□□□ -0.98
TRAF1-202ENST00000540010 CDAP32320 146 aa8.92□□□□□ -0.98
TRAF1-202ENST00000540010 RAG2P55895 527 aa8.92□□□□□ -0.98
TRAF1-202ENST00000540010 PPP1R1AQ13522 171 aa8.92□□□□□ -0.98
TRAF1-202ENST00000540010 OR2W3Q7Z3T1 314 aa8.92□□□□□ -0.98
TRAF1-202ENST00000540010 FAM219AQ8IW50 185 aa8.92□□□□□ -0.98
TRAF1-202ENST00000540010 C9orf40Q8IXQ3 194 aa8.92□□□□□ -0.98
TRAF1-202ENST00000540010 LIPHQ8WWY8 451 aa8.92□□□□□ -0.98
TRAF1-202ENST00000540010 TAAR8Q969N4 342 aa8.92□□□□□ -0.98
TRAF1-202ENST00000540010 C4orf45Q96LM5 186 aa8.92□□□□□ -0.98
TRAF1-202ENST00000540010 FAM96BQ9Y3D0 163 aa8.92□□□□□ -0.98
TRAF1-202ENST00000540010 LOC102725191A0A1B0GVB3 256 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 C19orf67A6NJJ6 358 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 ZNF724A8MTY0 619 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 NPIPB9F8W1W9 429 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 BHLHE40O14503 412 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 CTAG2O75638 210 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 MPZL1O95297 269 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 TMIGD3P0DMS9 266 aaPredicted RBP8.91□□□□□ -0.98
TRAF1-202ENST00000540010 PNLIPP16233 465 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 TBXA2RP21731 343 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 CLEC12BQ2HXU8 276 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 CST9LP1Q5W188 147 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 RTL6Q6ICC9 239 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 NAXDQ8IW45 347 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 LGI3Q8N145 548 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 MAGT1Q9H0U3 335 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 ZCCHC4Q9H5U6 513 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 FLVCR1Q9Y5Y0 555 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 R4GMQ9 66 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 PCDH15Q96QU1 1955 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 ANKRD30BLA7E2S9 258 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 UMAD1C9J7I0 102 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 ANGPTL7O43827 346 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 LRP3O75074 770 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 NGFRP08138 427 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 ZP3P21754 424 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 ABCD3P28288 659 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 RAB5CP51148 216 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 RAB11AP62491 216 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 SSX2Q16385 188 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 TUSC1Q2TAM9 212 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 ZNF684Q5T5D7 378 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 NAA40Q86UY6 237 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 TERB2Q8NHR7 220 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 RHBDD1Q8TEB9 315 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 SEH1LQ96EE3 360 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 PBOV1Q9GZY1 135 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 CHST11Q9NPF2 352 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 LSM2Q9Y333 95 aaKnown RBP8.91□□□□□ -0.98
TRAF1-202ENST00000540010 TNRC18O15417 2968 aaPredicted RBP8.91□□□□□ -0.98
TRAF1-202ENST00000540010 ROS1P08922 2347 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 IGKV3D-11A0A0A0MRZ8 115 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 FTCDNL1E5RQL4 147 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 PRSS44E7EML9 344 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 SIGLEC5O15389 551 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 BCL2L11O43521 198 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 IGHA1P01876 353 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 HOXA6P31267 233 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 IL2RGP31785 369 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms