RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 CNIH4Q9P003 139 aa11.23□□□□□ -0.61
DDX55-206ENST00000539934 FLVCR1Q9Y5Y0 555 aa11.23□□□□□ -0.61
DDX55-206ENST00000539934 USP9XQ93008 2570 aaPredicted RBP11.23□□□□□ -0.61
DDX55-206ENST00000539934 SPTAN1Q13813 2472 aaKnown RBP11.23□□□□□ -0.61
DDX55-206ENST00000539934 TRAV30A0A087WSZ9 112 aa11.23□□□□□ -0.61
DDX55-206ENST00000539934 HSPB2A8KAH6 182 aa11.23□□□□□ -0.61
DDX55-206ENST00000539934 SULT2B1O00204 365 aa11.23□□□□□ -0.61
DDX55-206ENST00000539934 TOXO94900 526 aa11.23□□□□□ -0.61
DDX55-206ENST00000539934 SOD3P08294 240 aa11.23□□□□□ -0.61
DDX55-206ENST00000539934 NID1P14543 1247 aa11.23□□□□□ -0.61
DDX55-206ENST00000539934 CD27P26842 260 aa11.23□□□□□ -0.61
DDX55-206ENST00000539934 MPGP29372 298 aa11.23□□□□□ -0.61
DDX55-206ENST00000539934 TSFMP43897 325 aaKnown RBP11.23□□□□□ -0.61
DDX55-206ENST00000539934 GPR12P47775 334 aa11.23□□□□□ -0.61
DDX55-206ENST00000539934 TNFSF10P50591 281 aa11.23□□□□□ -0.61
DDX55-206ENST00000539934 ATP5J2P56134 94 aa11.23□□□□□ -0.61
DDX55-206ENST00000539934 PCBP4P57723 403 aaKnown RBP11.23□□□□□ -0.61
DDX55-206ENST00000539934 OR10A3P58181 314 aa11.23□□□□□ -0.61
DDX55-206ENST00000539934 HHEXQ03014 270 aa11.23□□□□□ -0.61
DDX55-206ENST00000539934 TLE3Q04726 772 aa11.23□□□□□ -0.61
DDX55-206ENST00000539934 PPP1R8Q12972 351 aaKnown RBP11.23□□□□□ -0.61
DDX55-206ENST00000539934 HSPB2Q16082 182 aa11.23□□□□□ -0.61
DDX55-206ENST00000539934 LDLRAD2Q5SZI1 272 aa11.23□□□□□ -0.61
DDX55-206ENST00000539934 ADAM5Q6NVV9 412 aa11.23□□□□□ -0.61
DDX55-206ENST00000539934 FBXW12Q6X9E4 464 aa11.23□□□□□ -0.61
DDX55-206ENST00000539934 VN1R4Q7Z5H5 301 aa11.23□□□□□ -0.61
DDX55-206ENST00000539934 TMPRSS12Q86WS5 348 aa11.23□□□□□ -0.61
DDX55-206ENST00000539934 GABRG1Q8N1C3 465 aa11.23□□□□□ -0.61
DDX55-206ENST00000539934 TMEM156Q8N614 296 aa11.23□□□□□ -0.61
DDX55-206ENST00000539934 NFKBIDQ8NI38 313 aa11.23□□□□□ -0.61
DDX55-206ENST00000539934 GPX8Q8TED1 209 aa11.23□□□□□ -0.61
DDX55-206ENST00000539934 SLC35E1Q96K37 410 aa11.23□□□□□ -0.61
DDX55-206ENST00000539934 ARL6Q9H0F7 186 aa11.23□□□□□ -0.61
DDX55-206ENST00000539934 C1GALT1Q9NS00 363 aa11.23□□□□□ -0.61
DDX55-206ENST00000539934 HRASLS2Q9NWW9 162 aa11.23□□□□□ -0.61
DDX55-206ENST00000539934 ENTPD2Q9Y5L3 495 aa11.23□□□□□ -0.61
DDX55-206ENST00000539934 FITM1A5D6W6 292 aa11.22□□□□□ -0.61
DDX55-206ENST00000539934 GLOD5A6NK44 160 aa11.22□□□□□ -0.61
DDX55-206ENST00000539934 B4DGG1 531 aa11.22□□□□□ -0.61
DDX55-206ENST00000539934 EIF4E2O60573 245 aaKnown RBP11.22□□□□□ -0.61
DDX55-206ENST00000539934 OR6A2O95222 327 aa11.22□□□□□ -0.61
DDX55-206ENST00000539934 KNG1P01042 644 aa11.22□□□□□ -0.61
DDX55-206ENST00000539934 IFNA5P01569 189 aa11.22□□□□□ -0.61
DDX55-206ENST00000539934 CD38P28907 300 aa11.22□□□□□ -0.61
DDX55-206ENST00000539934 NTSP30990 170 aa11.22□□□□□ -0.61
DDX55-206ENST00000539934 FRKP42685 505 aaPredicted RBP11.22□□□□□ -0.61
DDX55-206ENST00000539934 BTN3A2P78410 334 aa11.22□□□□□ -0.61
DDX55-206ENST00000539934 CRMP1Q14194 572 aa11.22□□□□□ -0.61
DDX55-206ENST00000539934 COX19Q49B96 90 aa11.22□□□□□ -0.61
DDX55-206ENST00000539934 ZNF628Q5EBL2 1059 aa11.22□□□□□ -0.61
DDX55-206ENST00000539934 ZNF761Q86XN6 746 aaPredicted RBP11.22□□□□□ -0.61
DDX55-206ENST00000539934 SPACA3Q8IXA5 215 aa11.22□□□□□ -0.61
DDX55-206ENST00000539934 TMEM45BQ96B21 275 aa11.22□□□□□ -0.61
DDX55-206ENST00000539934 DAZAP1Q96EP5 407 aaKnown RBP11.22□□□□□ -0.61
DDX55-206ENST00000539934 THOC3Q96J01 351 aaKnown RBP11.22□□□□□ -0.61
DDX55-206ENST00000539934 LRRC61Q9BV99 259 aa11.22□□□□□ -0.61
DDX55-206ENST00000539934 CACNG6Q9BXT2 260 aa11.22□□□□□ -0.61
DDX55-206ENST00000539934 DPAGT1Q9H3H5 408 aa11.22□□□□□ -0.61
DDX55-206ENST00000539934 HRH4Q9H3N8 390 aa11.22□□□□□ -0.61
DDX55-206ENST00000539934 B3GAT1Q9P2W7 334 aa11.22□□□□□ -0.61
DDX55-206ENST00000539934 URGCP-MRPS24S4R325 110 aa11.22□□□□□ -0.61
DDX55-206ENST00000539934 NBASA2RRP1 2371 aa11.22□□□□□ -0.61
DDX55-206ENST00000539934 SPENQ96T58 3664 aaKnown RBP11.21□□□□□ -0.61
DDX55-206ENST00000539934 NOTCH2Q04721 2471 aa11.21□□□□□ -0.61
DDX55-206ENST00000539934 PPIAL4EA0A075B759 164 aa11.21□□□□□ -0.61
DDX55-206ENST00000539934 TGIF2-C20orf24A0A0A6YYL0 155 aa11.21□□□□□ -0.61
DDX55-206ENST00000539934 PPIAL4CA0A0B4J2A2 164 aa11.21□□□□□ -0.61
DDX55-206ENST00000539934 FAM230AA0A1W2PPH8 454 aa11.21□□□□□ -0.61
DDX55-206ENST00000539934 OR11H12B2RN74 326 aa11.21□□□□□ -0.61
DDX55-206ENST00000539934 PPIAL4DF5H284 164 aa11.21□□□□□ -0.61
DDX55-206ENST00000539934 SCGB1D1O95968 90 aa11.21□□□□□ -0.61
DDX55-206ENST00000539934 F12P00748 615 aaPredicted RBP11.21□□□□□ -0.61
DDX55-206ENST00000539934 OPN1SWP03999 348 aa11.21□□□□□ -0.61
DDX55-206ENST00000539934 PPIAL4FP0DN26 164 aa11.21□□□□□ -0.61
DDX55-206ENST00000539934 FABP4P15090 132 aa11.21□□□□□ -0.61
DDX55-206ENST00000539934 MGMTP16455 207 aa11.21□□□□□ -0.61
DDX55-206ENST00000539934 PPIAP62937 165 aaKnown RBP11.21□□□□□ -0.61
DDX55-206ENST00000539934 HMGN3Q15651 99 aa11.21□□□□□ -0.61
DDX55-206ENST00000539934 FCRL6Q6DN72 434 aa11.21□□□□□ -0.61
DDX55-206ENST00000539934 STEAP1BQ6NZ63 245 aa11.21□□□□□ -0.61
DDX55-206ENST00000539934 CEACAM20Q6UY09 585 aa11.21□□□□□ -0.61
DDX55-206ENST00000539934 ZNF562Q6V9R5 426 aa11.21□□□□□ -0.61
DDX55-206ENST00000539934 ZNF367Q7RTV3 350 aa11.21□□□□□ -0.61
DDX55-206ENST00000539934 OR11H1Q8NG94 326 aa11.21□□□□□ -0.61
DDX55-206ENST00000539934 OR7G2Q8NG99 324 aa11.21□□□□□ -0.61
DDX55-206ENST00000539934 OR11H2Q8NH07 326 aa11.21□□□□□ -0.61
DDX55-206ENST00000539934 NT5CQ8TCD5 201 aa11.21□□□□□ -0.61
DDX55-206ENST00000539934 ZNF675Q8TD23 568 aa11.21□□□□□ -0.61
DDX55-206ENST00000539934 CASTOR1Q8WTX7 329 aa11.21□□□□□ -0.61
DDX55-206ENST00000539934 BCL2L2Q92843 193 aaPredicted RBP11.21□□□□□ -0.61
DDX55-206ENST00000539934 ARL11Q969Q4 196 aa11.21□□□□□ -0.61
DDX55-206ENST00000539934 TMEM186Q96B77 213 aa11.21□□□□□ -0.61
DDX55-206ENST00000539934 NEURL3Q96EH8 262 aa11.21□□□□□ -0.61
DDX55-206ENST00000539934 REEP6Q96HR9 211 aa11.21□□□□□ -0.61
DDX55-206ENST00000539934 ANKRA2Q9H9E1 313 aa11.21□□□□□ -0.61
DDX55-206ENST00000539934 PLEKHJ1Q9NW61 149 aa11.21□□□□□ -0.61
DDX55-206ENST00000539934 STEAP1Q9UHE8 339 aa11.21□□□□□ -0.61
DDX55-206ENST00000539934 RAB22AQ9UL26 194 aa11.21□□□□□ -0.61
DDX55-206ENST00000539934 CCDC88CQ9P219 2028 aa11.21□□□□□ -0.61
DDX55-206ENST00000539934 AIFM1O95831 613 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms