RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 H3BUI4 141 aa8.89□□□□□ -0.99
SPARC-209ENST00000539687 J3QW42 95 aa8.89□□□□□ -0.99
SPARC-209ENST00000539687 RAB27BO00194 218 aa8.89□□□□□ -0.99
SPARC-209ENST00000539687 SSNA1O43805 119 aa8.89□□□□□ -0.99
SPARC-209ENST00000539687 CREBL2O60519 120 aaPredicted RBP8.89□□□□□ -0.99
SPARC-209ENST00000539687 ICMTO60725 284 aa8.89□□□□□ -0.99
SPARC-209ENST00000539687 KDM4BO94953 1096 aa8.89□□□□□ -0.99
SPARC-209ENST00000539687 CNOT4O95628 575 aaKnown RBP8.89□□□□□ -0.99
SPARC-209ENST00000539687 RAB3DO95716 219 aa8.89□□□□□ -0.99
SPARC-209ENST00000539687 IGHG3P01860 377 aa8.89□□□□□ -0.99
SPARC-209ENST00000539687 CD74P04233 296 aa8.89□□□□□ -0.99
SPARC-209ENST00000539687 CELA3AP09093 270 aa8.89□□□□□ -0.99
SPARC-209ENST00000539687 ABOP16442 354 aa8.89□□□□□ -0.99
SPARC-209ENST00000539687 CPT2P23786 658 aa8.89□□□□□ -0.99
SPARC-209ENST00000539687 PTGFRP43088 359 aa8.89□□□□□ -0.99
SPARC-209ENST00000539687 NOVA1P51513 510 aaKnown RBP8.89□□□□□ -0.99
SPARC-209ENST00000539687 CCR6P51684 374 aa8.89□□□□□ -0.99
SPARC-209ENST00000539687 GNG2P59768 71 aa8.89□□□□□ -0.99
SPARC-209ENST00000539687 MALLQ13021 153 aa8.89□□□□□ -0.99
SPARC-209ENST00000539687 KISS1Q15726 138 aa8.89□□□□□ -0.99
SPARC-209ENST00000539687 NDUFA5Q16718 116 aa8.89□□□□□ -0.99
SPARC-209ENST00000539687 ZNF260Q3ZCT1 412 aa8.89□□□□□ -0.99
SPARC-209ENST00000539687 CLVS2Q5SYC1 327 aa8.89□□□□□ -0.99
SPARC-209ENST00000539687 SFRP4Q6FHJ7 346 aaPredicted RBP8.89□□□□□ -0.99
SPARC-209ENST00000539687 ZNF774Q6NX45 483 aa8.89□□□□□ -0.99
SPARC-209ENST00000539687 GLDNQ6ZMI3 551 aaPredicted RBP8.89□□□□□ -0.99
SPARC-209ENST00000539687 P4HA3Q7Z4N8 544 aa8.89□□□□□ -0.99
SPARC-209ENST00000539687 SKA3Q8IX90 412 aa8.89□□□□□ -0.99
SPARC-209ENST00000539687 TUSC5Q8IXB3 177 aa8.89□□□□□ -0.99
SPARC-209ENST00000539687 GABRG1Q8N1C3 465 aa8.89□□□□□ -0.99
SPARC-209ENST00000539687 CHST4Q8NCG5 386 aa8.89□□□□□ -0.99
SPARC-209ENST00000539687 FNDC9Q8TBE3 224 aa8.89□□□□□ -0.99
SPARC-209ENST00000539687 SGK3Q96BR1 496 aa8.89□□□□□ -0.99
SPARC-209ENST00000539687 SARAFQ96BY9 339 aa8.89□□□□□ -0.99
SPARC-209ENST00000539687 GMPPAQ96IJ6 420 aaPredicted RBP8.89□□□□□ -0.99
SPARC-209ENST00000539687 ALX4Q9H161 411 aaPredicted RBP8.89□□□□□ -0.99
SPARC-209ENST00000539687 CALHM2Q9HA72 323 aa8.89□□□□□ -0.99
SPARC-209ENST00000539687 RANGRFQ9HD47 186 aaPredicted RBP8.89□□□□□ -0.99
SPARC-209ENST00000539687 MYOZ1Q9NP98 299 aaPredicted RBP8.89□□□□□ -0.99
SPARC-209ENST00000539687 IFT46Q9NQC8 304 aa8.89□□□□□ -0.99
SPARC-209ENST00000539687 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.89□□□□□ -0.99
SPARC-209ENST00000539687 SLC2A8Q9NY64 477 aa8.89□□□□□ -0.99
SPARC-209ENST00000539687 ZNF319Q9P2F9 582 aa8.89□□□□□ -0.99
SPARC-209ENST00000539687 SLC7A11Q9UPY5 501 aa8.89□□□□□ -0.99
SPARC-209ENST00000539687 AQP7O14520 342 aa8.88□□□□□ -0.99
SPARC-209ENST00000539687 ARPC1BO15143 372 aaKnown RBP8.88□□□□□ -0.99
SPARC-209ENST00000539687 GMDSO60547 372 aa8.88□□□□□ -0.99
SPARC-209ENST00000539687 CDC14BO60729 498 aa8.88□□□□□ -0.99
SPARC-209ENST00000539687 CEACAM4O75871 244 aa8.88□□□□□ -0.99
SPARC-209ENST00000539687 MMP7P09237 267 aaPredicted RBP8.88□□□□□ -0.99
SPARC-209ENST00000539687 SULT1A3P0DMM9 295 aa8.88□□□□□ -0.99
SPARC-209ENST00000539687 SULT1A4P0DMN0 295 aa8.88□□□□□ -0.99
SPARC-209ENST00000539687 NAT2P11245 290 aa8.88□□□□□ -0.99
SPARC-209ENST00000539687 C4BPBP20851 252 aa8.88□□□□□ -0.99
SPARC-209ENST00000539687 MPGP29372 298 aa8.88□□□□□ -0.99
SPARC-209ENST00000539687 RFC3P40938 356 aa8.88□□□□□ -0.99
SPARC-209ENST00000539687 GZMKP49863 264 aa8.88□□□□□ -0.99
SPARC-209ENST00000539687 ARF1P84077 181 aaKnown RBP8.88□□□□□ -0.99
SPARC-209ENST00000539687 TGFBR3Q03167 851 aa8.88□□□□□ -0.99
SPARC-209ENST00000539687 UNC119Q13432 240 aa8.88□□□□□ -0.99
SPARC-209ENST00000539687 TGIF1Q15583 401 aa8.88□□□□□ -0.99
SPARC-209ENST00000539687 LINC00303Q3SY05 128 aa8.88□□□□□ -0.99
SPARC-209ENST00000539687 RNASE10Q5GAN6 216 aaKnown RBP8.88□□□□□ -0.99
SPARC-209ENST00000539687 PABPC1L2AQ5JQF8 200 aa8.88□□□□□ -0.99
SPARC-209ENST00000539687 SPICQ8N5J4 248 aa8.88□□□□□ -0.99
SPARC-209ENST00000539687 ACBD4Q8NC06 268 aa8.88□□□□□ -0.99
SPARC-209ENST00000539687 CSNK2A3Q8NEV1 391 aa8.88□□□□□ -0.99
SPARC-209ENST00000539687 OR4C16Q8NGL9 310 aa8.88□□□□□ -0.99
SPARC-209ENST00000539687 TNFAIP8L1Q8WVP5 186 aa8.88□□□□□ -0.99
SPARC-209ENST00000539687 GCDHQ92947 438 aaPredicted RBP8.88□□□□□ -0.99
SPARC-209ENST00000539687 SPSB4Q96A44 273 aa8.88□□□□□ -0.99
SPARC-209ENST00000539687 ZNF775Q96BV0 537 aaPredicted RBP8.88□□□□□ -0.99
SPARC-209ENST00000539687 RAB3CQ96E17 227 aa8.88□□□□□ -0.99
SPARC-209ENST00000539687 MRPS24Q96EL2 167 aaKnown RBP8.88□□□□□ -0.99
SPARC-209ENST00000539687 WDYHV1Q96HA8 205 aa8.88□□□□□ -0.99
SPARC-209ENST00000539687 LYZL4Q96KX0 146 aa8.88□□□□□ -0.99
SPARC-209ENST00000539687 GINS4Q9BRT9 223 aa8.88□□□□□ -0.99
SPARC-209ENST00000539687 C1QTNF5Q9BXJ0 243 aa8.88□□□□□ -0.99
SPARC-209ENST00000539687 METTL9Q9H1A3 318 aa8.88□□□□□ -0.99
SPARC-209ENST00000539687 WNT5BQ9H1J7 359 aa8.88□□□□□ -0.99
SPARC-209ENST00000539687 SLC7A10Q9NS82 523 aa8.88□□□□□ -0.99
SPARC-209ENST00000539687 ZNF224Q9NZL3 707 aa8.88□□□□□ -0.99
SPARC-209ENST00000539687 MRPL15Q9P015 296 aaKnown RBP8.88□□□□□ -0.99
SPARC-209ENST00000539687 KCNN3Q9UGI6 736 aa8.88□□□□□ -0.99
SPARC-209ENST00000539687 BAHCC1Q9P281 2608 aa8.88□□□□□ -0.99
SPARC-209ENST00000539687 CACNA1GO43497 2377 aa8.87□□□□□ -0.99
SPARC-209ENST00000539687 MEIKINA0A087WXM9 373 aa8.87□□□□□ -0.99
SPARC-209ENST00000539687 ZNF816-ZNF321PA0A0X1KG74 233 aa8.87□□□□□ -0.99
SPARC-209ENST00000539687 SERPINE3A8MV23 424 aa8.87□□□□□ -0.99
SPARC-209ENST00000539687 PRSS44E7EML9 344 aa8.87□□□□□ -0.99
SPARC-209ENST00000539687 RGS13O14921 159 aa8.87□□□□□ -0.99
SPARC-209ENST00000539687 NKX2-8O15522 239 aa8.87□□□□□ -0.99
SPARC-209ENST00000539687 TPD52L2O43399 206 aaKnown RBP8.87□□□□□ -0.99
SPARC-209ENST00000539687 SS18L1O75177 396 aaPredicted RBP8.87□□□□□ -0.99
SPARC-209ENST00000539687 CRTAPO75718 401 aaPredicted RBP8.87□□□□□ -0.99
SPARC-209ENST00000539687 MPIG6BO95866 241 aa8.87□□□□□ -0.99
SPARC-209ENST00000539687 HIST1H1DP16402 221 aaKnown RBP8.87□□□□□ -0.99
SPARC-209ENST00000539687 NTF4P34130 210 aa8.87□□□□□ -0.99
SPARC-209ENST00000539687 RBP2P50120 134 aa8.87□□□□□ -0.99
SPARC-209ENST00000539687 CCL11P51671 97 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms